Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e04
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 223 1e-58
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 223 1e-58
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 210 6e-55
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 210 6e-55
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 146 2e-35
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 144 5e-35
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 108 4e-24
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 92 5e-19
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 92 5e-19
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 79 4e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 71 1e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 1e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 1e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 71 1e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 1e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 70 2e-12
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 68 7e-12
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 68 7e-12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 68 7e-12
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 67 1e-11
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 67 1e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 67 2e-11
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 67 2e-11
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 67 2e-11
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 66 2e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 66 4e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 66 4e-11
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 54 2e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 53 3e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 47 2e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 47 2e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 40 0.002
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 40 0.002
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 40 0.003
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 38 0.006
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 37 0.014
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 37 0.014
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 35 0.057
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 35 0.057
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 34 0.10
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 34 0.10
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.71
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 31 0.93
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 31 0.93
Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 29 3.8
Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 223 bits (544), Expect = 1e-58
Identities = 107/168 (63%), Positives = 126/168 (75%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
+ELTL GI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCNTRRKVD LTE M FT
Sbjct: 235 DELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFT 294
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXX 427
VS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 295 VSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
Query: 426 XXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 283
INFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 355 RIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 223 bits (544), Expect = 1e-58
Identities = 107/168 (63%), Positives = 126/168 (75%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
+ELTL GI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCNTRRKVD LTE M FT
Sbjct: 235 DELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFT 294
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXX 427
VS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 295 VSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
Query: 426 XXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 283
INFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 355 RIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 210 bits (514), Expect = 6e-55
Identities = 97/168 (57%), Positives = 128/168 (76%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
+ELTL GIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVDWLT+ M +FT
Sbjct: 232 DELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFT 291
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXX 427
VS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS VINYDLP+NRE Y
Sbjct: 292 VSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
Query: 426 XXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 283
INFV + D R L+DIE +Y T I EMP ++A++I
Sbjct: 352 RIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 210 bits (514), Expect = 6e-55
Identities = 97/168 (57%), Positives = 128/168 (76%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
+ELTL GIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVDWLT+ M +FT
Sbjct: 232 DELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFT 291
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXX 427
VS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS VINYDLP+NRE Y
Sbjct: 292 VSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
Query: 426 XXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 283
INFV + D R L+DIE +Y T I EMP ++A++I
Sbjct: 352 RIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 146 bits (353), Expect = 2e-35
Identities = 74/161 (45%), Positives = 101/161 (62%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
+ELTL GI+QFYI ++ +EWK LCDL T QA+IFCNTRR+V LTE +
Sbjct: 194 DELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALIFCNTRRRVTQLTEQLMSIPIK 253
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXX 427
VS HG+M+ ERE +++ F + ++RVL+TTDL+ARG+++++ S +INYD+ N ENY
Sbjct: 254 VSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGNMENYML 312
Query: 426 XXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMP 304
I+F TE D LK IE+ Y T I EMP
Sbjct: 313 RNGRQGNFGSKGLPISFFTENDISDLKKIENHYSTRIEEMP 353
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 144 bits (350), Expect = 5e-35
Identities = 72/110 (65%), Positives = 81/110 (73%)
Frame = -2
Query: 612 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENY 65
Query: 432 XXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 283
INFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 66 IHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 115
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 109 bits (262), Expect = 2e-24
Identities = 54/112 (48%), Positives = 70/112 (62%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
EE L IKQFY+ + K + +LY L++A +VIFC+T+ V WL E+M R
Sbjct: 422 EEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQ 481
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 451
V +HGDM ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 482 VDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 533
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 109 bits (262), Expect = 2e-24
Identities = 54/112 (48%), Positives = 70/112 (62%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
EE L IKQFY+ + K + +LY L++A +VIFC+T+ V WL E+M R
Sbjct: 447 EEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQ 506
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 451
V +HGDM ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 507 VDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 558
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 109 bits (262), Expect = 2e-24
Identities = 54/112 (48%), Positives = 70/112 (62%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
EE L IKQFY+ + K + +LY L++A +VIFC+T+ V WL E+M R
Sbjct: 831 EEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQ 890
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 451
V +HGDM ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 891 VDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 942
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 108 bits (260), Expect = 4e-24
Identities = 59/164 (35%), Positives = 87/164 (53%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
EELTL G+ Q+Y ++ E+ K+ L L+ L I Q++IFCN+ ++V+ L + + ++
Sbjct: 248 EELTLLGVTQYYAFVQ-EKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYS 306
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXX 427
+H M Q R + FR G+ R L+ +DLL RGID+Q V+ VIN+D P N E Y
Sbjct: 307 CYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLH 366
Query: 426 XXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMPSDV 295
IN +T DR L+ IE T I +P V
Sbjct: 367 RIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTRIEPIPKTV 410
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 91.9 bits (218), Expect = 5e-19
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Frame = -2
Query: 783 ELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTV 604
+LTL G++Q Y+ ++ E K L +L D L Q VIF ++ + L + + ++F
Sbjct: 252 KLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPS 310
Query: 603 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXX 424
A+H M Q ER + F+ R+L+ TDL RG+D+++V+ V NYD+P + ++Y
Sbjct: 311 IAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHR 370
Query: 423 XXXXXXXXXXXXXINFVT-EADRRALKDIEDFYHTSIVEMPS--DVANLI*G 277
I FV+ E D + L ++D + SI E+P DV+ I G
Sbjct: 371 VARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKIDVSTYIEG 422
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 91.9 bits (218), Expect = 5e-19
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Frame = -2
Query: 783 ELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTV 604
+LTL G++Q Y+ ++ E K L +L D L Q VIF ++ + L + + ++F
Sbjct: 244 KLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPS 302
Query: 603 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXX 424
A+H M Q ER + F+ R+L+ TDL RG+D+++V+ V NYD+P + ++Y
Sbjct: 303 IAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHR 362
Query: 423 XXXXXXXXXXXXXINFVT-EADRRALKDIEDFYHTSIVEMPS--DVANLI*G 277
I FV+ E D + L ++D + SI E+P DV+ I G
Sbjct: 363 VARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKIDVSTYIEG 414
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/114 (32%), Positives = 61/114 (53%)
Frame = -2
Query: 681 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
+ +IF T+RK D LT +M + +HGD +Q ER+ ++++F+ G + +++ TD+ A
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAA 437
Query: 501 RGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDI 340
RG+DV + VINYD P+N E+Y F T + KD+
Sbjct: 438 RGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDL 491
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 79.0 bits (186), Expect = 4e-15
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Frame = -2
Query: 777 TLXGIKQFYIAIELEEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVS 601
T I Q + +E +E K L DL D T + ++F T+R L ++ +++ V
Sbjct: 397 TSENIMQKIVWVEEDE-KRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVV 455
Query: 600 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXX 421
+HGD+ Q ERE + FRTG++ +L+ T + ARG+D+ V VINYDLPS+ + Y
Sbjct: 456 TIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRI 515
Query: 420 XXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMP 304
+F + +R +++ D + E+P
Sbjct: 516 GRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELP 554
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical protein
F01F1.7 protein.
Length = 730
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Frame = -2
Query: 735 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 556
E+ K + L ++ ++ +IF N ++ D L++ + F + +HG Q +RE +
Sbjct: 557 EDRKRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYAL 616
Query: 555 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINF 376
+ + G+S +L+ TD+ RGIDV+ VS V+NYD+ + E+Y I F
Sbjct: 617 QALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITF 676
Query: 375 VTEADRRALKDIED-FYHTSIVEMPSDVAN 289
+T D D++ + + P ++AN
Sbjct: 677 LTPDDTAVYFDLKQVLVESPVSSCPPELAN 706
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 589 LGIDIDSYTTEKSAEVYTK----KTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 644
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
R +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 645 RSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 800 LGIDIDSYTTEKNSEVYTK----KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
R +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 856 RSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 901
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 800 LGIDIDSYTTEKNSEVYTK----KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
R +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 856 RSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 901
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 589 LGIDIDSYTTEKSAEVYTK----KTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 644
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
R +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 645 RSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 800 LGIDIDSYTTEKNSEVYTK----KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
R +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 856 RSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 901
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 589 LGIDIDSYTTEKSAEVYTK----KTMVFVSQRAMADILASILSSAQVPAITIHGAREQRE 644
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
R +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 645 RSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 68.1 bits (159), Expect = 7e-12
Identities = 41/147 (27%), Positives = 69/147 (46%)
Frame = -2
Query: 777 TLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSA 598
T+ +KQ YI + ++K L L + + A++FC T + +
Sbjct: 254 TVDNLKQHYIFVP-NKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVP 312
Query: 597 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXX 418
+HG M Q +R + +F++ + +L+ TD+ ARG+D+ V VINYD+PS ++Y
Sbjct: 313 LHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVG 372
Query: 417 XXXXXXXXXXXINFVTEADRRALKDIE 337
I VT+ D A + IE
Sbjct: 373 RTARAGRSGIAITVVTQYDVEAYQKIE 399
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 68.1 bits (159), Expect = 7e-12
Identities = 34/130 (26%), Positives = 66/130 (50%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E D++ + + ++F ++ D L M +HG +Q+E
Sbjct: 546 LGIDIDTYTTEKNSDVF----VKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKE 601
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXX 391
R ++ FR+G+ VLI T ++ RG+D++ V VINYD+P+N ++Y
Sbjct: 602 RSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSG 661
Query: 390 XXINFVTEAD 361
+F++ AD
Sbjct: 662 RATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 68.1 bits (159), Expect = 7e-12
Identities = 34/130 (26%), Positives = 66/130 (50%)
Frame = -2
Query: 750 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 571
+ I+++ + E D++ + + ++F ++ D L M +HG +Q+E
Sbjct: 546 LGIDIDTYTTEKNSDVF----VKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKE 601
Query: 570 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXX 391
R ++ FR+G+ VLI T ++ RG+D++ V VINYD+P+N ++Y
Sbjct: 602 RSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSG 661
Query: 390 XXINFVTEAD 361
+F++ AD
Sbjct: 662 RATSFISLAD 671
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/118 (29%), Positives = 64/118 (54%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
+++ L GIKQ+ +A LE L + ++ QA++FC+ K + + +
Sbjct: 228 DDVQLFGIKQYVVAKCSP--MLEKLTHVLKSIRYVQALVFCDQISKCEPIATHLKSSGLD 285
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
V+ + M Q++R++ + Q R ++L+++DL ARGID V+ V+N D +N E Y
Sbjct: 286 VTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETY 343
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/118 (29%), Positives = 64/118 (54%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
+++ L GIKQ+ +A LE L + ++ QA++FC+ K + + +
Sbjct: 228 DDVQLFGIKQYVVAKCSP--MLEKLTHVLKSIRYVQALVFCDQISKCEPIATHLKSSGLD 285
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
V+ + M Q++R++ + Q R ++L+++DL ARGID V+ V+N D +N E Y
Sbjct: 286 VTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETY 343
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/124 (28%), Positives = 62/124 (50%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
++F T+R + L ++ + ++HGD+ Q ERE + FR+G +L+ T + ARG
Sbjct: 402 LVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARG 461
Query: 495 IDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSI 316
+D+ V VINYDLP + + Y +F + +R +D+++ S
Sbjct: 462 LDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESN 521
Query: 315 VEMP 304
E+P
Sbjct: 522 QEVP 525
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/124 (28%), Positives = 62/124 (50%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
++F T+R + L ++ + ++HGD+ Q ERE + FR+G +L+ T + ARG
Sbjct: 386 LVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARG 445
Query: 495 IDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSI 316
+D+ V VINYDLP + + Y +F + +R +D+++ S
Sbjct: 446 LDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESN 505
Query: 315 VEMP 304
E+P
Sbjct: 506 QEVP 509
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/124 (28%), Positives = 62/124 (50%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
++F T+R + L ++ + ++HGD+ Q ERE + FR+G +L+ T + ARG
Sbjct: 383 LVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARG 442
Query: 495 IDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSI 316
+D+ V VINYDLP + + Y +F + +R +D+++ S
Sbjct: 443 LDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESN 502
Query: 315 VEMP 304
E+P
Sbjct: 503 QEVP 506
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/87 (32%), Positives = 51/87 (58%)
Frame = -2
Query: 693 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 514
L + +A++FC T+++ D + + + + + +HGD ER+ + F+ G R L+ +
Sbjct: 503 LQMDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCS 562
Query: 513 DLLARGIDVQQVSCVINYDLPSNRENY 433
D++ARG+DVQ V VI+ LP + Y
Sbjct: 563 DVVARGLDVQGVPFVISVTLPDEKSMY 589
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Frame = -2
Query: 714 LCDLYDTLSIAQA-----VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 550
+C++ + L+ A +IF ++ D L+ ++ +HG Q +RE+ +
Sbjct: 324 VCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNM 383
Query: 549 FRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVT 370
R+G ++L+ TDL +RGIDV ++ V+NYD P + E Y ++F+
Sbjct: 384 LRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLW 443
Query: 369 EADRRALKDIEDFYHTSIVEMPSDV 295
DR + + S E+P +
Sbjct: 444 WNDRSNFEGLIQILEKSEQEVPDQL 468
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 65.7 bits (153), Expect = 4e-11
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Frame = -2
Query: 765 IKQFYIAIELEEWKLETLC-DLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHG 589
I+Q ++ ++ KL L +L + S+ + +IF + + + + + ++DF + +HG
Sbjct: 484 IEQKVFVMQNQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHG 543
Query: 588 DMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXX 409
DM Q ER + +FR S++L+ TD+ ARG+D+ ++ VIN+D+ + + +
Sbjct: 544 DMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTG 602
Query: 408 XXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMPSDVANL 286
VTE D + + + E+P + +L
Sbjct: 603 RAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDL 643
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/83 (32%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = -2
Query: 678 AVIFCNTRRKVDWLTESMHLRDF-TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
+++F + + K D + + + + +V+ +HG +DQ +R+ + F+TG +VL+ T + A
Sbjct: 554 SIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAA 613
Query: 501 RGIDVQQVSCVINYDLPSNRENY 433
RG+DV+ + V+NYD P++ E+Y
Sbjct: 614 RGLDVKNLILVVNYDCPNHYEDY 636
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Frame = -2
Query: 765 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRD--FTVSAMH 592
+KQ E+ K + +L T A++F ++ + L + + D V +++
Sbjct: 347 VKQKLTYCGTEDGKKIAIRNLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSIN 406
Query: 591 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXX 412
+ER+ M +FR G VL+ T+LL RG+D+ V VINYDLP++ +Y
Sbjct: 407 SGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRT 466
Query: 411 XXXXXXXXXINFVTEADRRALKDIEDFYHTSIVEMP 304
+ + T+AD + +K I S ++P
Sbjct: 467 GRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDVP 502
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = -2
Query: 681 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
+ +IF + VD + E + ++ V+++HG DQ +R + FR VL+ TD+ +
Sbjct: 443 KVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVAS 502
Query: 501 RGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVT-EADRRALKDIEDFYH 325
+G+D Q + VIN+D+P + ENY F+ +++ L D++
Sbjct: 503 KGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLA 562
Query: 324 TSIVEMP 304
+ E+P
Sbjct: 563 EAGQELP 569
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = -2
Query: 681 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
+ +IF + + D + +HGD Q RE ++ F++ +L+TTDLL+
Sbjct: 648 KTIIFVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLS 707
Query: 501 RGIDVQQVSCVINYDLP 451
RGIDV + VIN+DLP
Sbjct: 708 RGIDVSDLDRVINFDLP 724
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = -2
Query: 777 TLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM-HLRD-FTV 604
T +KQ Y+ +E EE K+ L + ++++F ++ ++ +LTE+ LR V
Sbjct: 291 TPDNLKQSYVIVE-EEHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPV 349
Query: 603 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
+ G M+Q++R +F + VLI TD+ +RG+D + + VI D P+ ++Y
Sbjct: 350 MGLWGTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDY 406
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/126 (24%), Positives = 60/126 (47%)
Frame = -2
Query: 684 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 505
+ +IF T R+ L F V ++H + Q++R + FR+ + +V+I TD+
Sbjct: 338 SSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVA 397
Query: 504 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYH 325
+RG+D+ V V+N+++P + Y ++FVT+ D L+ +E
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 324 TSIVEM 307
+ E+
Sbjct: 458 KKLDEL 463
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/126 (24%), Positives = 60/126 (47%)
Frame = -2
Query: 684 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 505
+ +IF T R+ L F V ++H + Q++R + FR+ + +V+I TD+
Sbjct: 338 SSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVA 397
Query: 504 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYH 325
+RG+D+ V V+N+++P + Y ++FVT+ D L+ +E
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 324 TSIVEM 307
+ E+
Sbjct: 458 KKLDEL 463
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/77 (28%), Positives = 43/77 (55%)
Frame = -2
Query: 681 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
Q V+FC T + V+++ +H S ++ +D R++ +++F + +L+ TD+ A
Sbjct: 267 QTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAA 326
Query: 501 RGIDVQQVSCVINYDLP 451
RG+D+ + VIN P
Sbjct: 327 RGVDIPLLDTVINLHFP 343
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/77 (28%), Positives = 43/77 (55%)
Frame = -2
Query: 681 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
Q V+FC T + V+++ +H S ++ +D R++ +++F + +L+ TD+ A
Sbjct: 267 QTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAA 326
Query: 501 RGIDVQQVSCVINYDLP 451
RG+D+ + VIN P
Sbjct: 327 RGVDIPLLDTVINLHFP 343
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/118 (25%), Positives = 56/118 (47%)
Frame = -2
Query: 786 EELTLXGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 607
EE T+ G++Q YI ++ +L L + ++F ++ V + E ++ D
Sbjct: 282 EEATVEGLQQGYIVAPSDK-RLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIP 340
Query: 606 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
++HG Q++R QF + +L+ TD+ ARG+D+ V ++ YD Y
Sbjct: 341 CMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREY 398
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/112 (25%), Positives = 54/112 (48%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
++F T++ + + L V M + Q +R + +F+ VL++TDL +RG
Sbjct: 421 IVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRG 480
Query: 495 IDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDI 340
+D++ V VIN ++P + + Y I+ V E +R+ LK+I
Sbjct: 481 LDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKLLKEI 532
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -2
Query: 612 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 445
F V + + R ++ +F +RVLI +D+LARG D+ +V CVINY+LP++
Sbjct: 424 FEVDYFTAQLFGKRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPAD 479
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/77 (25%), Positives = 43/77 (55%)
Frame = -2
Query: 681 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
+ +IF N+ + D L + + +MH +Q +R+ + FR G + ++ +++ A
Sbjct: 1004 KTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCA 1063
Query: 501 RGIDVQQVSCVINYDLP 451
RG+++ + V+NYD+P
Sbjct: 1064 RGLNIAGLDHVVNYDMP 1080
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/77 (25%), Positives = 43/77 (55%)
Frame = -2
Query: 681 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 502
+ +IF N+ + D L + + +MH +Q +R+ + FR G + ++ +++ A
Sbjct: 1004 KTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCA 1063
Query: 501 RGIDVQQVSCVINYDLP 451
RG+++ + V+NYD+P
Sbjct: 1064 RGLNIAGLDHVVNYDMP 1080
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = -2
Query: 765 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIF---CNTRRKVDWLTESMHLRDFTVSAM 595
+K +Y+ +E K + + + +IF CN+ R + E L + A+
Sbjct: 232 LKNYYVECRADE-KTSVCLEFIRQRTDKKILIFFPSCNSVRYFYKIFERC-LGKRPLFAV 289
Query: 594 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 445
HG R ++ F ++ V+I+TD++ARGID+ + VI +DLP +
Sbjct: 290 HGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKH 339
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -2
Query: 597 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
+H M Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E Y
Sbjct: 303 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIY 357
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -2
Query: 597 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
+H M Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E Y
Sbjct: 470 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIY 524
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
+I+C +R + + +++ H M+ +R + + +G +V++ T G
Sbjct: 313 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 372
Query: 495 IDVQQVSCVINYDLPSNRENY 433
ID V VI++ LP + ENY
Sbjct: 373 IDKPNVRFVIHHSLPKSIENY 393
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
+I+C +R + + +++ H M+ +R + + +G +V++ T G
Sbjct: 336 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 395
Query: 495 IDVQQVSCVINYDLPSNRENY 433
ID V VI++ LP + ENY
Sbjct: 396 IDKPNVRFVIHHSLPKSIENY 416
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
+I+C T++ VD + + + H + + +RE F ++ T G
Sbjct: 450 IIYCQTKQMVDDVNCVLRRIGVRSAHYHAGLTKNQREKAHTDFMRDKITTIVATVAFGMG 509
Query: 495 IDVQQVSCVINYDLPSNRENY 433
ID V VI+Y P+N E+Y
Sbjct: 510 IDKPDVRNVIHYGCPNNIESY 530
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = -2
Query: 585 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 433
+ +R+ EV+ R+F LI T +L G+DV+Q + VI +D P + +Y
Sbjct: 438 LHKRQTEVL-RRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSY 487
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
+++C +R++ + + + + H ++ R + R + V+ T G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 495 IDVQQVSCVINYDLPSNRENY 433
ID V VI+Y LP + E Y
Sbjct: 533 IDKPDVRFVIHYSLPKSIEGY 553
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = -2
Query: 675 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 496
+++C +R++ + + + + H ++ R + R + V+ T G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 495 IDVQQVSCVINYDLPSNRENY 433
ID V VI+Y LP + E Y
Sbjct: 533 IDKPDVRFVIHYSLPKSIEGY 553
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = -2
Query: 651 KVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 472
K +W++ L T S+ ++++ ++ F G R+L++T + G+DV + S
Sbjct: 731 KSEWMSG---LNKSTASSADISASKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSL 787
Query: 471 VINYDLPSN 445
VI Y+ +N
Sbjct: 788 VIKYNYATN 796
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = -2
Query: 651 KVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 472
K +W++ L T S+ ++++ ++ F G R+L++T + G+DV + S
Sbjct: 731 KSEWMSG---LNKSTASSADISASKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSL 787
Query: 471 VINYDLPSN 445
VI Y+ +N
Sbjct: 788 VIKYNYATN 796
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = -2
Query: 672 IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGI 493
IFC T ++V +T ++ + + + + ++ V + ++ T++LARGI
Sbjct: 228 IFCETVQRVTQVTMTLRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNILARGI 287
Query: 492 DVQQVSCVINYDLPSNRENY 433
DV V I ++ ++ + Y
Sbjct: 288 DVSSVKHTIIMEMSADFDTY 307
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = -2
Query: 672 IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGI 493
IFC T ++V +T ++ + + + + ++ V + ++ T++LARGI
Sbjct: 381 IFCETVQRVTQVTMALRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNILARGI 440
Query: 492 DVQQVSCVINYDLPSNRENY 433
DV V I ++ ++ + Y
Sbjct: 441 DVSSVKHTIIMEMSADFDTY 460
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/80 (18%), Positives = 40/80 (50%)
Frame = -2
Query: 672 IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGI 493
IFC T +V +T ++ + + + ++++ + + + ++ T++++RGI
Sbjct: 379 IFCETVSRVIQVTMALRQMGYNFKPVCSSVLKQQQAITLNDLEFCNIHGVVCTNIMSRGI 438
Query: 492 DVQQVSCVINYDLPSNRENY 433
DV V I ++ ++ +Y
Sbjct: 439 DVSSVKQTIIMEMSTDFPSY 458
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -2
Query: 507 LARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIED 334
++RGID VS V+N+D P + Y ++F ++R L+ I++
Sbjct: 368 VSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQE 425
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -2
Query: 507 LARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIED 334
++RGID VS V+N+D P + Y ++F ++R L+ I++
Sbjct: 435 VSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQE 492
>Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical
protein T09E11.10 protein.
Length = 338
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 663 NTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 550
N RK W+T+ ++ V + GD+DQ+ +E++M +
Sbjct: 96 NVLRKT-WMTQRNRIKSIFVIGLGGDVDQKTKELVMSE 132
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 777 TLXGIKQFYIA-IEL-EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 628
T+ GI F + + L + KLETLCD+ D + +IFC ++ + S
Sbjct: 115 TMHGISGFDLTTVPLYHQSKLETLCDIIDNCKL--EIIFCENAKRAEGFLSS 164
>Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical
protein B0272.2 protein.
Length = 213
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 657 RRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 553
R +VD L +H D VSA+H M QR R R
Sbjct: 68 RMRVDQLRADVHRVDMAVSAVHTRMTQRWRAATER 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,864,230
Number of Sequences: 27780
Number of extensions: 345705
Number of successful extensions: 811
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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