Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e03
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1646 - 35027475-35027600,35027713-35027826,35027920-350281... 76 3e-14
06_01_0302 + 2188905-2188989,2189309-2189406,2189487-2189753,218... 37 0.015
09_04_0085 + 14441123-14443507,14443731-14443787 34 0.14
04_03_0643 + 18328807-18331969,18332560-18332627 34 0.14
06_01_0223 - 1709897-1709912,1710188-1712520 33 0.18
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 32 0.42
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900... 32 0.55
08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 32 0.55
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 31 0.73
05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931 31 0.73
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 31 1.3
07_01_0376 + 2815419-2815755,2815912-2817659 30 1.7
01_01_0100 - 755894-756662,757086-757598,758718-761050 30 1.7
08_02_0009 + 11216532-11218687,11220727-11225998 30 2.2
08_02_0008 + 11212351-11214506,11214548-11214584 30 2.2
08_02_0007 + 11208170-11210325,11210367-11210403 30 2.2
08_02_0003 + 11180421-11180757,11180773-11185715 30 2.2
08_02_0002 + 11173365-11173512,11173528-11178470 30 2.2
06_01_1138 - 9429447-9433868 30 2.2
04_03_0995 + 21521877-21521977,21522152-21522217,21523630-215236... 30 2.2
05_07_0182 + 28243881-28245406,28245460-28245505,28246309-282464... 29 2.9
08_02_1079 + 24190453-24190483,24191201-24191475,24191619-241919... 28 6.8
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 28 6.8
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 28 9.0
>04_04_1646 -
35027475-35027600,35027713-35027826,35027920-35028106,
35028262-35028379,35028699-35028827,35028947-35028998,
35029525-35029869
Length = 356
Score = 76.2 bits (179), Expect = 3e-14
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Frame = -1
Query: 744 KWQEFAXXXXXXXXXXXKLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMY 565
KW++FA K +WDEQ Q W YG+ + +K+ +IE +P D +
Sbjct: 124 KWEQFAKMKGITKHKKNKREWDEQTQTWKRTYGYDRVNDDKDIP-IIEAKATDEPGVDPF 182
Query: 564 EKKAGEKSEKVAKNELQRLKNLARAKKV-------KIPRVGLPVTSDKASATQ------L 424
++ +K + V K E RL+NL +A KV ++ LP+T KA + L
Sbjct: 183 AQRREDKKKHVEKQEKNRLENLKKAAKVGALPSHIQLAATALPITGTKADIPKKSRKKDL 242
Query: 423 XXXXXXXXXXXXSLGKFQDKLPKEKEARGKGVH-ELIPGKERKRKAPIPTPAAEKEYNLN 247
S GKF +KLP EK + G H + +P E K EK+ N
Sbjct: 243 EDVAGMASSATASGGKFDEKLPGEKPPKNPGKHRKFLPVVEGKGMG-----NQEKQQNDK 297
Query: 246 LLDNILSKRPKIDMDKAVAKSINEEEVKRSHEKKNMK 136
+L+ +L+K + MD V ++I +VK+ +++ K
Sbjct: 298 ILNALLAKSSEDQMD--VGRAITMYKVKKEKQRRKDK 332
>06_01_0302 +
2188905-2188989,2189309-2189406,2189487-2189753,
2189906-2189947,2190071-2190078,2190230-2190273,
2190615-2190695,2190779-2190907,2191017-2191114,
2191188-2191448,2191537-2191581,2191748-2191881,
2191965-2192045,2192127-2192308,2192632-2192746,
2192873-2193056,2193144-2193329
Length = 679
Score = 37.1 bits (82), Expect = 0.015
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Frame = -1
Query: 588 LDPMTDMYEKKAGEKSEKVAKNELQRLKNLARA----KKVKIPRVGLPVTSDKA-----S 436
+DP +KK ++ EK KN L+ LK A+ +++ LP+T KA S
Sbjct: 522 VDPFAQRKQKK--KRVEKQGKNRLENLKKAAKVGALPSHIQLAATSLPITGTKADLPKKS 579
Query: 435 ATQLXXXXXXXXXXXXSLGKFQDKLPKEKEARGKGVH-ELIPGKERKRKAPIPTPAAEKE 259
+ S GKF +KLP EK + G H + IP E + + K+
Sbjct: 580 RKEDLENVAGMGSATASGGKFDEKLPGEKPPKHPGKHKKFIPVAEGEGMGNL-----GKQ 634
Query: 258 YNLNLLDNILSKR-PKIDMDKAVAK 187
N +L ++L++ ++D+ KA ++
Sbjct: 635 QNDKILMSLLARNSEQLDVCKASSR 659
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 33.9 bits (74), Expect = 0.14
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Frame = -1
Query: 537 KVAKNELQRLKNLARAKKVKIPRVGLPVTSDKASATQLXXXXXXXXXXXXSLGKFQDKLP 358
K+ EL + LAR KKVK + V K T++ K QDK
Sbjct: 344 KIRDKELYFYRELARVKKVK-KNEDMAVEIFKTQETKIEQIKR----------KEQDKYD 392
Query: 357 KEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKAVAKSI 181
KE++ GK + E E +R + + E+E NL N ++NI ++ + ++
Sbjct: 393 KEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYNDFINTL 449
Query: 180 NE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+E + + E + G GKRK G+G N
Sbjct: 450 DEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 483
>04_03_0643 + 18328807-18331969,18332560-18332627
Length = 1076
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 419 VDNC---VAEALSEVTGSPTLGILTFLALARFLSLCNSFFATFSDFSPAFFSYISVIGSK 589
+DNC + +SE + T+G+ + L+ +S CN+ + F PA+ ++ I
Sbjct: 882 IDNCGSLTSICVSEASNIHTVGVFSSLSTVT-ISFCNALLSLDEFFMPAYMPFVKTIDVL 940
Query: 590 FC 595
FC
Sbjct: 941 FC 942
>06_01_0223 - 1709897-1709912,1710188-1712520
Length = 782
Score = 33.5 bits (73), Expect = 0.18
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 4/171 (2%)
Frame = -1
Query: 588 LDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKIPRVGLPVTSDKASATQLXXXXX 409
L + + Y K + K+ EL + LAR KKVK + V K T++
Sbjct: 327 LKEINEEYNKSIKCEWPKIRDKELYFYRELARVKKVK-KNEDMAVEIFKNQETKIEQIKR 385
Query: 408 XXXXXXXSLGKFQDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNI 232
K QDK KE++ GK + E E +R + + E+E NL N ++NI
Sbjct: 386 ----------KEQDKHGKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENI 432
Query: 231 LSKRPKIDMDKAVAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
++ + +++E + + E + G GKRK G+G N
Sbjct: 433 ENEIDNAEQYNDFIDTLDEVGLHNLDNAMEAMEVDLGTGKRKIYGEGTVKN 483
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 32.3 bits (70), Expect = 0.42
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Frame = -1
Query: 537 KVAKNELQRLKNLARAKKVKIPRVGLPVTSDKASATQLXXXXXXXXXXXXSLGKFQDKLP 358
K+ EL + LAR KKVK + V K T++ K QDK
Sbjct: 344 KIRNKELYFYRELARVKKVK-KNEDMAVEIFKNQETKIEQIKR----------KEQDKHG 392
Query: 357 KEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKAVAKSI 181
KE++ GK + E E +R + + E+E NL N ++NI ++ + ++
Sbjct: 393 KEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNAEQYNDFINTL 449
Query: 180 NE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+E + + E + G GKRK G+G N
Sbjct: 450 DEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 483
>10_05_0085 -
9005539-9005922,9006207-9006463,9006707-9006883,
9007349-9007490,9007814-9007904,9009024-9010942
Length = 989
Score = 31.9 bits (69), Expect = 0.55
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Frame = -1
Query: 537 KVAKNELQRLKNLARAKKVKIPRVGLPVTSDKASATQLXXXXXXXXXXXXSLGKFQDKLP 358
K+ EL K LAR KKVK + V K T++ K +DK
Sbjct: 206 KIRDKELYFYKELARVKKVK-KNEDMAVEIFKNQETKIEQIKR----------KEKDKYC 254
Query: 357 KEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKAVAKSI 181
KE++ GK + E E +R + + E+E NL N ++NI ++ + ++
Sbjct: 255 KEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNAEQYNDFINTL 311
Query: 180 NE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+E + + E + G GKRK G+G N
Sbjct: 312 DEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 345
>08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391
Length = 818
Score = 31.9 bits (69), Expect = 0.55
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Frame = -1
Query: 537 KVAKNELQRLKNLARAKKVKIPRVGLPVTSDKASATQLXXXXXXXXXXXXSLGKFQDKLP 358
K+ EL + LAR KKVK + V K T++ K QDK
Sbjct: 339 KIRDKELYFYRELARVKKVK-KNEDMAVKIFKNQETKIEQIKR----------KEQDKHG 387
Query: 357 KEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKAVAKSI 181
KE++ GK + E E +R + + E+E NL N ++NI ++ + ++
Sbjct: 388 KEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYNDFINTL 444
Query: 180 NE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+E + + E + G GKRK G+G N
Sbjct: 445 DEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 478
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = -1
Query: 294 KAPIPTPAAEKEYNLNLLDNILSKRPKIDMDKAVAKSINEEEVKRSHEKK 145
K+ + + +KE L LL+ +KR + + K V +S+N EE+K +++
Sbjct: 35 KSAVVSLRRQKEVELRLLEEETAKRVEQAIRKQVEESLNSEEIKHEIQRR 84
>05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931
Length = 553
Score = 31.5 bits (68), Expect = 0.73
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = -1
Query: 378 KFQDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMD 202
K QDK KE++ GK + E E +R + + E+E NL N ++NI ++ +
Sbjct: 19 KEQDKHGKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNAEQY 75
Query: 201 KAVAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+++E + + E + G+GKRK G+G N
Sbjct: 76 NDFINTLDEVGLHNLDNAMEAMEVDLGIGKRKKYGEGTVKN 116
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -1
Query: 309 KERKRKAPIPTPAAEKEYNLNL-LDNILSKRPKIDMDKAVAKSINEEE-VKRSHEKKNMK 136
KE + + A +E + L D L K+ K + D+ KS++ E +K + ++
Sbjct: 277 KELQAMQQLSVKKANEEVFIKLGSDKDLKKKEKDEKDERTKKSLSINEFLKPAEGERYYN 336
Query: 135 PGLGKRKTQGKGNATNF 85
PG G+ + +G+G+ F
Sbjct: 337 PGRGRGRGRGRGDRGGF 353
>07_01_0376 + 2815419-2815755,2815912-2817659
Length = 694
Score = 30.3 bits (65), Expect = 1.7
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Frame = -1
Query: 537 KVAKNELQRLKNLARAKKVKIPRVGLPVTSDKASATQLXXXXXXXXXXXXSLGKFQDKLP 358
K+ EL + LAR KKVK + V K T++ K QDK
Sbjct: 292 KIRDKELYFYRELARVKKVK-KNEDMAVEIFKNQETKIEQIKR----------KEQDKHG 340
Query: 357 KEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKAVAKSI 181
KE++ GK + E + +R + + E+E NL N ++NI ++ + ++
Sbjct: 341 KEEQNLGKILSEEEQWAKNER---LFLESYEEEINLINEMENIENEIDNAEQYNDFINTL 397
Query: 180 NE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+E + + E + G GKRK G+G N
Sbjct: 398 DEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 431
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 30.3 bits (65), Expect = 1.7
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Frame = -1
Query: 537 KVAKNELQRLKNLARAKKVKIPRVGLPVTSDKASATQLXXXXXXXXXXXXSLGKFQDKLP 358
K+ EL + LAR KKVK + V K T++ K QD+
Sbjct: 344 KIRDKELYFYRELARVKKVK-KNEDMAVEIFKNQETKIEQIKK----------KEQDEHD 392
Query: 357 KEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKAVAKSI 181
KE++ GK + E E ++ + + E+E NL N ++NI ++ + ++
Sbjct: 393 KEEQNLGKILSEEEQWAENEK---LFLESYEEEINLINEMENIENEIDNAEQYNDFINTL 449
Query: 180 NE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+E ++ + E + G GKRK G+G N
Sbjct: 450 DEVGLHNLENAMEAMEVDLGTGKRKRYGEGTVKN 483
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKA 196
QDK KE++ GK + E E +R + + E+E NL N ++NI ++ +
Sbjct: 375 QDKHDKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYND 431
Query: 195 VAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+++E + + E + G GKRK G+G N
Sbjct: 432 FINTLDEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 470
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKA 196
QDK KE++ GK + E E +R + + E+E NL N ++NI ++ +
Sbjct: 1089 QDKHDKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYND 1145
Query: 195 VAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+++E + + E + G GKRK G+G N
Sbjct: 1146 FINTLDEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 1184
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKA 196
QDK KE++ GK + E E +R + + E+E NL N ++NI ++ +
Sbjct: 375 QDKHDKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYND 431
Query: 195 VAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+++E + + E + G GKRK G+G N
Sbjct: 432 FINTLDEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 470
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKA 196
QDK KE++ GK + E E +R + + E+E NL N ++NI ++ +
Sbjct: 375 QDKHDKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYND 431
Query: 195 VAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+++E + + E + G GKRK G+G N
Sbjct: 432 FINTLDEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 470
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKA 196
QDK KE++ GK + E E +R + + E+E NL N ++NI ++ +
Sbjct: 373 QDKHDKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYND 429
Query: 195 VAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+++E + + E + G GKRK G+G N
Sbjct: 430 FINTLDEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 468
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNL-NLLDNILSKRPKIDMDKA 196
QDK KE++ GK + E E +R + + E+E NL N ++NI ++ +
Sbjct: 310 QDKHDKEEQNLGKILSEEEQWAENER---LFLESYEEEINLINEMENIENEIDNTEQYND 366
Query: 195 VAKSINE---EEVKRSHEKKNMKPGLGKRKTQGKGNATN 88
+++E + + E + G GKRK G+G N
Sbjct: 367 FINTLDEVGLHNLDNAMEAMEVDLGTGKRKRYGEGTVKN 405
>06_01_1138 - 9429447-9433868
Length = 1473
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Frame = -1
Query: 654 LYGFKKTAAEKEKNWLIEVPQNLDPMTD-MYEKKAGEKSEKVA-----KNELQRLKNLAR 493
L FKK E+ KN+++E P MTD ++EK+A K +K+ N L ++ L +
Sbjct: 1238 LLTFKKGEFEQLKNFVVEGPN----MTDIIFEKEAAPKLQKIVLSLTNVNSLSGVEGLPK 1293
Query: 492 AKKVKI 475
K++++
Sbjct: 1294 LKEIEL 1299
>04_03_0995 +
21521877-21521977,21522152-21522217,21523630-21523696,
21523959-21524041,21524318-21524359,21524614-21524733,
21524806-21524869,21525028-21525113,21525217-21525299,
21525994-21526070,21526549-21526567,21526568-21526661,
21527042-21527087
Length = 315
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 90 LLHCLYLEFYVFLSRVSYFSFRVIS*LPLRLYFSLQLYPYQFLASY 227
+ C L ++FL R+S+ V+S L L+L LY + SY
Sbjct: 42 IAQCFLLNGFIFLGRISFSGIMVLSTLHLQLRVEYTLYYNIWFRSY 87
>05_07_0182 +
28243881-28245406,28245460-28245505,28246309-28246400,
28246513-28246635,28246753-28246984
Length = 672
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 570 MYEKKAGEKSEKVAKNELQRLKNLARAKKV--KIPRVGLPVTSDKASAT 430
++ ++A + S+ V K++L LK RA + PR G+P TS++A T
Sbjct: 364 VFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRT 412
>08_02_1079 +
24190453-24190483,24191201-24191475,24191619-24191977,
24192066-24192306,24192391-24192603,24192677-24192769,
24192872-24192973,24194104-24194481
Length = 563
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -1
Query: 300 KRKAPIPTPAAEKEYNLNLLDNILSKRPKIDM--DKAVAKSINEEEVKRSHEKKNMKPGL 127
+R+ P+ A+ EY + IL +ID K +A +I E + + K
Sbjct: 3 RRRRPVAREPAQNEYERTRQEKILQNIRRIDELGIKDIAATIKHIETQHASSKTK---NS 59
Query: 126 GKRKTQGKGNATN 88
G +K+ G+G+ T+
Sbjct: 60 GTKKSHGEGSDTS 72
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 276 PAAEKEYNLNLLDNILSKRPK--IDMDKAVAKSINEEEVKRSHEKKNMKPGLGKRKTQGK 103
P + YNL + + + ++ K +D + + E + S +N +PG K+K G
Sbjct: 259 PKLLRRYNLRFVTSSVQEKAKTGVDQKQELKTEEGESSDQESEVVENPEPGSNKKKESGL 318
Query: 102 G 100
G
Sbjct: 319 G 319
>02_01_0425 -
3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 684 WDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEK 559
WD+ W+P +KT + K N L V + +DP T +++
Sbjct: 14 WDDP---WIPRDWTRKTVSNKGTNMLTRVNELIDPYTGDWDE 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,953,233
Number of Sequences: 37544
Number of extensions: 341361
Number of successful extensions: 1225
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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