Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e03
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein. 132 1e-30
BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesi... 132 1e-30
BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesi... 132 1e-30
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 36 0.20
EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein. 36 0.20
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 36 0.20
BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation ... 32 1.9
AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein pr... 32 1.9
AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein. 32 1.9
AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation ... 32 1.9
AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein. 32 1.9
AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein. 32 1.9
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 30 7.6
U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein. 30 7.6
U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein. 30 7.6
BC056667-1|AAH56667.1| 362|Homo sapiens CCDC18 protein protein. 30 7.6
BC020234-1|AAH20234.1| 195|Homo sapiens Unknown (protein for MG... 30 7.6
AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein. 30 7.6
AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein. 30 7.6
AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein. 30 7.6
AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein. 30 7.6
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 30 7.6
AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein. 30 7.6
AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein. 30 7.6
AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein. 30 7.6
AL139421-1|CAI22508.1| 1454|Homo sapiens coiled-coil domain cont... 30 7.6
>D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein.
Length = 399
Score = 132 bits (319), Expect = 1e-30
Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Frame = -1
Query: 744 KWQEFAXXXXXXXXXXXKLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMY 565
+WQ+FA L WDE +W +G+++ A + K WLIEVP N DP+ D +
Sbjct: 147 RWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQR-ARDDTKEWLIEVPGNADPLEDQF 205
Query: 564 EKKAGEKSEKVAKNELQRLKNLARAKKVKIP-RVGLPVTSDKASATQLXXXXXXXXXXXX 388
K+ K E+VAKNEL RL+NLARA K+++P GL T + S +L
Sbjct: 206 AKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPTGHQ-SKEELGRAMQVAKVSTA 264
Query: 387 SLGKFQDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNLNLLDNILSKRPKID 208
S+G+FQ++LPKEK RG GK+RK + AAEK+ L LL + SK+P++D
Sbjct: 265 SVGRFQERLPKEKVPRGS-------GKKRKFQPLFGDFAAEKKNQLELLRVMNSKKPQLD 317
Query: 207 MDKAVAKSINEEEVKRSHEKKNMKPGLGKRK--TQGKG 100
+ +A K + EE+ + + +++ M GKRK QG G
Sbjct: 318 VTRATNKQMREEDQEEAAKRRKMSQ-KGKRKGGRQGPG 354
>BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesis
regulator homolog (S. cerevisiae) protein.
Length = 365
Score = 132 bits (319), Expect = 1e-30
Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Frame = -1
Query: 744 KWQEFAXXXXXXXXXXXKLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMY 565
+WQ+FA L WDE +W +G+++ A + K WLIEVP N DP+ D +
Sbjct: 113 RWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQR-ARDDTKEWLIEVPGNADPLEDQF 171
Query: 564 EKKAGEKSEKVAKNELQRLKNLARAKKVKIP-RVGLPVTSDKASATQLXXXXXXXXXXXX 388
K+ K E+VAKNEL RL+NLARA K+++P GL T + S +L
Sbjct: 172 AKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPTGHQ-SKEELGRAMQVAKVSTA 230
Query: 387 SLGKFQDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNLNLLDNILSKRPKID 208
S+G+FQ++LPKEK RG GK+RK + AAEK+ L LL + SK+P++D
Sbjct: 231 SVGRFQERLPKEKVPRGS-------GKKRKFQPLFGDFAAEKKNQLELLRVMNSKKPQLD 283
Query: 207 MDKAVAKSINEEEVKRSHEKKNMKPGLGKRK--TQGKG 100
+ +A K + EE+ + + +++ M GKRK QG G
Sbjct: 284 VTRATNKQMREEDQEEAAKRRKMSQ-KGKRKGGRQGPG 320
>BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesis
regulator homolog (S. cerevisiae) protein.
Length = 365
Score = 132 bits (319), Expect = 1e-30
Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Frame = -1
Query: 744 KWQEFAXXXXXXXXXXXKLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMY 565
+WQ+FA L WDE +W +G+++ A + K WLIEVP N DP+ D +
Sbjct: 113 RWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQR-ARDDTKEWLIEVPGNADPLEDQF 171
Query: 564 EKKAGEKSEKVAKNELQRLKNLARAKKVKIP-RVGLPVTSDKASATQLXXXXXXXXXXXX 388
K+ K E+VAKNEL RL+NLARA K+++P GL T + S +L
Sbjct: 172 AKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPTGHQ-SKEELGRAMQVAKVSTA 230
Query: 387 SLGKFQDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAAEKEYNLNLLDNILSKRPKID 208
S+G+FQ++LPKEK RG GK+RK + AAEK+ L LL + SK+P++D
Sbjct: 231 SVGRFQERLPKEKVPRGS-------GKKRKFQPLFGDFAAEKKNQLELLRVMNSKKPQLD 283
Query: 207 MDKAVAKSINEEEVKRSHEKKNMKPGLGKRK--TQGKG 100
+ +A K + EE+ + + +++ M GKRK QG G
Sbjct: 284 VTRATNKQMREEDQEEAAKRRKMSQ-KGKRKGGRQGPG 320
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 35.5 bits (78), Expect = 0.20
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Frame = -1
Query: 564 EKKAGEKSEKVA-KNELQRLKNLARAKKVKIPRVGLPVTSDKAS---ATQLXXXXXXXXX 397
EKK EKSE+VA K EL + + +K K P PV S + +
Sbjct: 585 EKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVP 644
Query: 396 XXXSLGKFQDKLPKEK-EARGKGVHELIPGKERKRKAPIPTPAAEKEYNLNLLDNILSKR 220
K + +PK E +GK P E K K+P+P E+ + +
Sbjct: 645 KSPVEEKGKSPVPKSPVEEKGKSPVSKSP-VEEKAKSPVPKSPVEEAKS---KAEVGKGE 700
Query: 219 PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLGKRKTQGKGNA 94
K + +K V ++ EE+V++ EK P K ++ K A
Sbjct: 701 QKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEA 742
>EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein.
Length = 916
Score = 35.5 bits (78), Expect = 0.20
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Frame = -1
Query: 564 EKKAGEKSEKVA-KNELQRLKNLARAKKVKIPRVGLPVTSDKAS---ATQLXXXXXXXXX 397
EKK EKSE+VA K EL + + +K K P PV S + +
Sbjct: 585 EKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVP 644
Query: 396 XXXSLGKFQDKLPKEK-EARGKGVHELIPGKERKRKAPIPTPAAEKEYNLNLLDNILSKR 220
K + +PK E +GK P E K K+P+P E+ + +
Sbjct: 645 KSPVEEKGKSPVPKSPVEEKGKSPVSKSP-VEEKAKSPVPKSPVEEAKS---KAEVGKGE 700
Query: 219 PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLGKRKTQGKGNA 94
K + +K V ++ EE+V++ EK P K ++ K A
Sbjct: 701 QKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEA 742
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 35.5 bits (78), Expect = 0.20
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Frame = -1
Query: 564 EKKAGEKSEKVA-KNELQRLKNLARAKKVKIPRVGLPVTSDKAS---ATQLXXXXXXXXX 397
EKK EKSE+VA K EL + + +K K P PV S + +
Sbjct: 585 EKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVP 644
Query: 396 XXXSLGKFQDKLPKEK-EARGKGVHELIPGKERKRKAPIPTPAAEKEYNLNLLDNILSKR 220
K + +PK E +GK P E K K+P+P E+ + +
Sbjct: 645 KSPVEEKGKSPVPKSPVEEKGKSPVSKSP-VEEKAKSPVPKSPVEEAKS---KAEVGKGE 700
Query: 219 PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLGKRKTQGKGNA 94
K + +K V ++ EE+V++ EK P K ++ K A
Sbjct: 701 QKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEA 742
>BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation
initiation factor 5B protein.
Length = 1220
Score = 32.3 bits (70), Expect = 1.9
Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 7/191 (3%)
Frame = -1
Query: 642 KKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKIPRVG 463
K E+E+ E L + + E + G+K + K ++ + KV +
Sbjct: 232 KAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGV 291
Query: 462 LPVTSDKA-SATQLXXXXXXXXXXXXSLGKFQDKLPKEKEAR---GKGVHELIPGKERKR 295
+P + +KA + T K +K KEKE + K + + K
Sbjct: 292 IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKL 351
Query: 294 KAPIPTPAAEKEYNLNLLDNILSKR---PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLG 124
K E+E + L+ + +KR +++ +K K E+E K +K+
Sbjct: 352 KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKS 411
Query: 123 KRKTQGKGNAT 91
+R+ + + AT
Sbjct: 412 QREARARAEAT 422
>AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein
protein.
Length = 1132
Score = 32.3 bits (70), Expect = 1.9
Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 7/191 (3%)
Frame = -1
Query: 642 KKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKIPRVG 463
K E+E+ E L + + E + G+K + K ++ + KV +
Sbjct: 144 KAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGV 203
Query: 462 LPVTSDKA-SATQLXXXXXXXXXXXXSLGKFQDKLPKEKEAR---GKGVHELIPGKERKR 295
+P + +KA + T K +K KEKE + K + + K
Sbjct: 204 IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKL 263
Query: 294 KAPIPTPAAEKEYNLNLLDNILSKR---PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLG 124
K E+E + L+ + +KR +++ +K K E+E K +K+
Sbjct: 264 KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKS 323
Query: 123 KRKTQGKGNAT 91
+R+ + + AT
Sbjct: 324 QREARARAEAT 334
>AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.
Length = 1220
Score = 32.3 bits (70), Expect = 1.9
Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 7/191 (3%)
Frame = -1
Query: 642 KKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKIPRVG 463
K E+E+ E L + + E + G+K + K ++ + KV +
Sbjct: 232 KAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGV 291
Query: 462 LPVTSDKA-SATQLXXXXXXXXXXXXSLGKFQDKLPKEKEAR---GKGVHELIPGKERKR 295
+P + +KA + T K +K KEKE + K + + K
Sbjct: 292 IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKL 351
Query: 294 KAPIPTPAAEKEYNLNLLDNILSKR---PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLG 124
K E+E + L+ + +KR +++ +K K E+E K +K+
Sbjct: 352 KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKS 411
Query: 123 KRKTQGKGNAT 91
+R+ + + AT
Sbjct: 412 QREARARAEAT 422
>AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation
factor IF2 protein.
Length = 1220
Score = 32.3 bits (70), Expect = 1.9
Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 7/191 (3%)
Frame = -1
Query: 642 KKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKIPRVG 463
K E+E+ E L + + E + G+K + K ++ + KV +
Sbjct: 232 KAEKKERERKKRDEEKAKLRKLKEREELETGKKDQSKQKESQRKFEEETVKSKVTVDTGV 291
Query: 462 LPVTSDKA-SATQLXXXXXXXXXXXXSLGKFQDKLPKEKEAR---GKGVHELIPGKERKR 295
+P + +KA + T K +K KEKE + K + + K
Sbjct: 292 IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKL 351
Query: 294 KAPIPTPAAEKEYNLNLLDNILSKR---PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLG 124
K E+E + L+ + +KR +++ +K K E+E K +K+
Sbjct: 352 KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKS 411
Query: 123 KRKTQGKGNAT 91
+R+ + + AT
Sbjct: 412 QREARARAEAT 422
>AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 32.3 bits (70), Expect = 1.9
Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 7/191 (3%)
Frame = -1
Query: 642 KKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKIPRVG 463
K E+E+ E L + + E + G+K + K ++ + KV +
Sbjct: 232 KAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGV 291
Query: 462 LPVTSDKA-SATQLXXXXXXXXXXXXSLGKFQDKLPKEKEAR---GKGVHELIPGKERKR 295
+P + +KA + T K +K KEKE + K + + K
Sbjct: 292 IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKL 351
Query: 294 KAPIPTPAAEKEYNLNLLDNILSKR---PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLG 124
K E+E + L+ + +KR +++ +K K E+E K +K+
Sbjct: 352 KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKS 411
Query: 123 KRKTQGKGNAT 91
+R+ + + AT
Sbjct: 412 QREARARAEAT 422
>AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.
Length = 1222
Score = 32.3 bits (70), Expect = 1.9
Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 7/191 (3%)
Frame = -1
Query: 642 KKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKIPRVG 463
K E+E+ E L + + E + G+K + K ++ + KV +
Sbjct: 234 KAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGV 293
Query: 462 LPVTSDKA-SATQLXXXXXXXXXXXXSLGKFQDKLPKEKEAR---GKGVHELIPGKERKR 295
+P + +KA + T K +K KEKE + K + + K
Sbjct: 294 IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKL 353
Query: 294 KAPIPTPAAEKEYNLNLLDNILSKR---PKIDMDKAVAKSINEEEVKRSHEKKNMKPGLG 124
K E+E + L+ + +KR +++ +K K E+E K +K+
Sbjct: 354 KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKS 413
Query: 123 KRKTQGKGNAT 91
+R+ + + AT
Sbjct: 414 QREARARAEAT 424
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1163 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1221
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1222 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1248
>U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1053 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1111
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1112 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1138
>U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1053 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1111
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1112 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1138
>BC056667-1|AAH56667.1| 362|Homo sapiens CCDC18 protein protein.
Length = 362
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 630 AEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKK 484
AE+++N + + L Y+KK EK EKV E +NL +K
Sbjct: 289 AERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEK 337
>BC020234-1|AAH20234.1| 195|Homo sapiens Unknown (protein for
MGC:31938) protein.
Length = 195
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 43 WCPFSLSCFRFLG*EICCIAFTL 111
WCP +LS FLG E CCI T+
Sbjct: 138 WCPEALSQPSFLGMESCCIQETI 160
>AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein.
Length = 4547
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1026 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1084
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1085 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1111
>AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein.
Length = 4551
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1030 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1088
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1089 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1115
>AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein.
Length = 4547
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1026 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1084
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1085 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1111
>AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein.
Length = 4515
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 994 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1052
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1053 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1079
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1163 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1221
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1222 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1248
>AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein.
Length = 4525
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1004 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1062
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1063 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1089
>AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein.
Length = 4533
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1012 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1070
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1071 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1097
>AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein.
Length = 4574
Score = 30.3 bits (65), Expect = 7.6
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = -1
Query: 372 QDKLPKEKEARGKGVHELIPGKERKRKAPIPTPAA-----EKEYNLNLLDNILSKRPKID 208
Q K E E GKGV L E+ P P+PAA E E L L+ + S I
Sbjct: 1053 QQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRS-LSAIY 1111
Query: 207 MDKAVAKSI------NEEEVKRSHEKK 145
++K S+ EEV R+HE++
Sbjct: 1112 LEKLKTISLVIRGTQGAEEVLRAHEEQ 1138
>AL139421-1|CAI22508.1| 1454|Homo sapiens coiled-coil domain
containing 18 protein.
Length = 1454
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 630 AEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKK 484
AE+++N + + L Y+KK EK EKV E +NL +K
Sbjct: 234 AERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEK 282
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,710,275
Number of Sequences: 237096
Number of extensions: 2016874
Number of successful extensions: 5199
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5184
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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