Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e01
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 238 3e-63
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 34 0.096
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 31 0.68
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 31 0.68
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 31 0.89
U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical pr... 30 1.6
DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein. 30 1.6
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 30 2.1
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 29 2.7
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 29 2.7
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 29 2.7
Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 3.6
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 29 3.6
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 4.8
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 6.3
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 6.3
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 6.3
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 28 6.3
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 6.3
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 6.3
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 28 6.3
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 6.3
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 28 8.3
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 28 8.3
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF125951-3|AAY86273.1| 244|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 238 bits (583), Expect = 3e-63
Identities = 121/240 (50%), Positives = 155/240 (64%), Gaps = 1/240 (0%)
Frame = -3
Query: 760 KDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXX 581
KDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 58 KDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDS 117
Query: 580 XXXXXXXXXXDEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 404
++YNVE D P F+ LD+GLARTTTG+++F MKG DGG+NVPHS
Sbjct: 118 TYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHS 175
Query: 403 IKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAI 224
RF G+D ESK++NAE HR I G HVA+YM L+++DED +KRQFSK++ G+ AD +
Sbjct: 176 ESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNL 235
Query: 223 EAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
A Y+K H AIRAD S K+ K S KR ++LT ERK R+ KKA ++ + Q
Sbjct: 236 VATYQKVHSAIRADASPAAKKAAKPS---KRHTAKRLTYDERKQRVADKKALLLQLKEQQ 292
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical protein
C34F11.5 protein.
Length = 894
Score = 34.3 bits (75), Expect = 0.096
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -3
Query: 280 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADP--SHKKKELKKDSVKQKRWNKRKLTL 107
+ K++ K +K + EA K+ + IR S KKE +K+ K+K K K
Sbjct: 815 TLKKKMRKKVKQQMLKKMEEAAAKENEKEIRKTKKKSKDKKEGRKEESKEKAHKKSKPKK 874
Query: 106 AERKNRIKQKKASFIKR 56
+ R+ + QKKA K+
Sbjct: 875 SNRRGHMNQKKAKRTKK 891
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -3
Query: 235 ADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKR--KLTLAERKNRIKQKKASFI 62
ADA++ I +K E +P+ KK KK+ K + K K E+ N+ + KK+
Sbjct: 71 ADAVKKIEEKGEEKKPEEPAKSKKSEKKEKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDP 130
Query: 61 KRLQAQ 44
K+ A+
Sbjct: 131 KKEDAK 136
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 541 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 365
N EP++ G F C+L TT+G+R G + L + ++FPG +
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 364 F 362
F
Sbjct: 128 F 128
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 229 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 59
A E + KK E R K+KE +KD K+K K K + K R K+K IK
Sbjct: 354 AEEKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEK-EKDKEKEREKRKSKEKIK 409
>U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical
protein F59G1.4 protein.
Length = 580
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 253 IKLGVTADAIEAIYKKAHEAI---RADPSHKKKELKKDSVKQKRWNKRKLTLAERK 95
I +G++ A+E YKKA + I + D +KKK+ K+ K+K R + L RK
Sbjct: 422 INIGLSDGAVE--YKKAQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRK 475
>DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein.
Length = 580
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 253 IKLGVTADAIEAIYKKAHEAI---RADPSHKKKELKKDSVKQKRWNKRKLTLAERK 95
I +G++ A+E YKKA + I + D +KKK+ K+ K+K R + L RK
Sbjct: 422 INIGLSDGAVE--YKKAQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRK 475
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3
Query: 184 DPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAE 38
D +KKE KKD ++K+ K++ E+K K++K K+ + + E
Sbjct: 160 DKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEE 208
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 235 ADAIEAIYKKAH--EAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 62
+D + YK +H E +R + K+E K +VKQ W++ K TL ++ + K+ I
Sbjct: 421 SDIHNSFYKVSHDSEVLRCEFETVKEEYNK-TVKQSEWDEMKATLNTLRSMNRSLKSEKI 479
Query: 61 K 59
+
Sbjct: 480 R 480
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 235 ADAIEAIYKKAH--EAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 62
+D + YK +H E +R + K+E K +VKQ W++ K TL ++ + K+ I
Sbjct: 421 SDIHNSFYKVSHDSEVLRCEFETVKEEYNK-TVKQSEWDEMKATLNTLRSMNRSLKSEKI 479
Query: 61 K 59
+
Sbjct: 480 R 480
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -3
Query: 211 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAE 38
KK E +AD + KK+ KKD+ K+K+ +K K +K + QKKA K+ A E
Sbjct: 53 KKRKERKKADKA--KKKTKKDAAKRKKKSKDK-----KKKQKAQKKAEKPKQQPASEE 103
>Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical
protein F33H1.3 protein.
Length = 359
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -3
Query: 289 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLT 110
D ++ +KY L T + A+ ++ + P H KK V NKR++T
Sbjct: 35 DRQQIRQAMAKYCNLDETTSKLLALERQIL-GLDPQPFHIDVLRKKQKVLTDSINKRRMT 93
Query: 109 LAERKNRIKQKK 74
L + K + KK
Sbjct: 94 LQQGKEDAELKK 105
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -3
Query: 307 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 128
+ LE+D + KR+ ++ K D E + K R +KKE K+ ++K+
Sbjct: 142 KKLEEDKKKEEKRKEAEEKK---KKDEEEKMKKDEERNKRKKEEEEKKEAKRREDEEKKE 198
Query: 127 NKRK--LTLAERKNRIKQKKASFIKRLQAQAEA 35
KRK + ERK R A F +++ + A
Sbjct: 199 AKRKEEEAIEERKRRQSALFAKFFSKVEKKKVA 231
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = -3
Query: 178 SHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 56
S +KK+L+K+ ++ + +KRK +ER+ + + K+ + K+
Sbjct: 70 SRRKKKLRKEKSRKSQRSKRKKRESERRKKERSKRIARSKK 110
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Frame = -3
Query: 409 HSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEY---MRSLEQDDEDSFKRQFSKYIKLGV 239
H++ F D + K A V R G V EY M+ + +D + + K K+ +
Sbjct: 474 HAVTYFTDADMKYIKSIATVIRQS--GFDVPEYLMEMKKVSRDRKKDMLKHAPKRHKIAI 531
Query: 238 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKN 92
+ + K +A + + K E + +K+ K+KL KN
Sbjct: 532 VKEQVIKKKKMLAKAAAEEKAKNKTETQTAEKPEKKIKKKKLIKKNNKN 580
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -3
Query: 211 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 74
+K E + D +KK+ KKD K+K +K + +++ + K++K
Sbjct: 124 EKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREK 169
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -3
Query: 328 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 149
L + E + +E+ + K+ + K + A EA RA+ KK+ +++
Sbjct: 58 LELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAAQEE 117
Query: 148 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 44
KQ W + ER + ++KK + +K+LQA+
Sbjct: 118 EHKQ--WKAEQ----ERIQKEQEKKEADLKKLQAE 146
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/78 (20%), Positives = 39/78 (50%)
Frame = -3
Query: 280 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 101
+ K + K ++L D ++ + E + +KKE K + K++ N+RK + +
Sbjct: 36 TLKSTWDKKMELKAKKDMVKRVQDNIREK-QVQERQEKKERKVEQEKRRLENERKAEIVQ 94
Query: 100 RKNRIKQKKASFIKRLQA 47
+ +I + K + ++L++
Sbjct: 95 KITKIHKLKKTKKRQLRS 112
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/81 (24%), Positives = 37/81 (45%)
Frame = -3
Query: 316 EYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQ 137
E + E+ +D K+ K K + + I K + +++ KK E K+D K+
Sbjct: 71 EEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKE 130
Query: 136 KRWNKRKLTLAERKNRIKQKK 74
+ K K ++K+ +K KK
Sbjct: 131 ESKEKSK-DEEKKKDEVKDKK 150
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 655 SDQPSHHNVATHVNKQRTQYGHLQSESRP 741
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 655 SDQPSHHNVATHVNKQRTQYGHLQSESRP 741
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 655 SDQPSHHNVATHVNKQRTQYGHLQSESRP 741
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 27.9 bits (59), Expect = 8.3
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Frame = -3
Query: 289 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSH---KKKELKKD-SVKQKRW-- 128
DED FK Q SK+I L A+ I I + + +P +++LK K W
Sbjct: 382 DEDFFKEQKSKFIHL---AEQIMKILSGLNIQMNLEPLRAPTNERDLKDYWETLNKIWVP 438
Query: 127 ------NKRKLTLAERKNRIKQKKASFIKRLQAQAE 38
++RKL L ++R K + +R+Q Q+E
Sbjct: 439 EISRQLHQRKLELETEQSRFSNKAVTAEERIQIQSE 474
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 27.9 bits (59), Expect = 8.3
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Frame = -3
Query: 289 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSH---KKKELKKD-SVKQKRW-- 128
DED FK Q SK+I L A+ I I + + +P +++LK K W
Sbjct: 382 DEDFFKEQKSKFIHL---AEQIMKILSGLNIQMNLEPLRAPTNERDLKDYWETLNKIWVP 438
Query: 127 ------NKRKLTLAERKNRIKQKKASFIKRLQAQAE 38
++RKL L ++R K + +R+Q Q+E
Sbjct: 439 EISRQLHQRKLELETEQSRFSNKAVTAEERIQIQSE 474
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 172 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 74
K+K+LKK + K+K+ +KL ERK K+K+
Sbjct: 131 KEKKLKKKAKKEKK-KAKKLEKKERKKERKEKR 162
>AF125951-3|AAY86273.1| 244|Caenorhabditis elegans Hypothetical
protein D2063.4 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +2
Query: 212 VDGFNSICSDS*FYVLAELSLERILIILFK--TSHVFSNMQTKDVSPVYFSIELF 370
VDGF ++CS S V + L ++++ +L + +HV ++ ++++ + IE++
Sbjct: 53 VDGFRNVCSGSDLSVRSNLDVKQLSELLKEDPCTHVAGDVVIENLTDIAIPIEVY 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,694,364
Number of Sequences: 27780
Number of extensions: 335125
Number of successful extensions: 1396
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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