Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17d24
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 37 0.019
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 36 0.025
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.23
U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical pr... 33 0.23
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 33 0.23
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 33 0.30
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 32 0.40
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 32 0.53
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 32 0.53
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 32 0.53
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 32 0.53
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 32 0.53
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 31 0.92
AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical ... 31 0.92
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 31 1.2
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 31 1.2
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 31 1.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 30 1.6
Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical pr... 29 2.8
U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical pr... 29 2.8
L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical pr... 29 2.8
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 2.8
AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical ... 29 2.8
Z78416-8|CAB01683.2| 588|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z69717-4|CAA93533.2| 588|Caenorhabditis elegans Hypothetical pr... 29 3.7
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53335-4|AAL27231.1| 504|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.7
AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical ... 29 3.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.7
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 29 4.9
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 29 4.9
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.9
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 4.9
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 4.9
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.9
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 6.5
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 6.5
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 28 6.5
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 6.5
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 8.6
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 28 8.6
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 8.6
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 36.7 bits (81), Expect = 0.019
Identities = 49/191 (25%), Positives = 69/191 (36%)
Frame = -2
Query: 641 APPCWPSPTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST*L 462
APP P PT + + P T+P+ PV ++ + ++ T +G T
Sbjct: 460 APPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVG---TMT 516
Query: 461 ASAWARTLSVTLDDRLVADPTGLPVWIRLXXXXXXXXXXXXXTQELMWRQSTPTVVFSVF 282
S T+ V T PV T + +TPT V
Sbjct: 517 PSTGTTTVPVPTTTGSPTTQTTAPV---------TKPTVPSSTTQTAPPVTTPTSQPPVT 567
Query: 281 LTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTSIRLRTISA 102
T+LL TPTV T V T PT T + T S A VTTS L S
Sbjct: 568 TTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVT--VAATTTSKAPVVTTSPTLAPTSP 625
Query: 101 LEVPSNMGNAV 69
++P++ + V
Sbjct: 626 TKLPTSPPSTV 636
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 36.3 bits (80), Expect = 0.025
Identities = 32/143 (22%), Positives = 57/143 (39%)
Frame = +1
Query: 160 VTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVT 339
V+ S G G + +G+ +T S G V S NT T G + S+ T
Sbjct: 1082 VSGSTGSTITGESTVSGSTESTVTAESTVSGSSV--STVSGNTGSTITGESTVSGSTGST 1139
Query: 340 VQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQK 519
+ ++ + + TG+ + ++ S S V A E+ + + + PD
Sbjct: 1140 GESTILESSVSTVSVSTGSTITDGSTASRSSVSTVSASTESTVSGGSSASIGSTNTPD-- 1197
Query: 520 VAKELSDTGNSIDGSVV*TVGKT 588
+ E + +G++I GS T T
Sbjct: 1198 -STESTISGSTISGSTGSTESST 1219
Score = 33.9 bits (74), Expect = 0.13
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 4/174 (2%)
Frame = +1
Query: 163 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTV 342
T SG GST G+ ++ G+S G ++S +T T G + +S+ T
Sbjct: 768 TVSGSTGSTGSTNNPGSTDSSTTGISTVSG--SSLSTISGSTGSTVSGSSDMTVSTGSTS 825
Query: 343 Q-GLVVTTPPGPSRI--QTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPD 513
G +T G S + TG+ V ++TS SSV+ ++ + + ST +SV
Sbjct: 826 SPGSTESTVSGASTMSPSTGSSVETSTS-GSSVSTVSQSTSSSTTGQSTVSESSVSTVSS 884
Query: 514 QKVAKELSDTGNSIDGSVV*TVGKT-TPVHNNNVAVGDGQQGGADHGVHSGVSV 672
+ + + + + + +V + G T T + + G G+ +G +V
Sbjct: 885 ESTISQSTGSTTTGESTVFGSTGSTATGSSTMSASTGSTDTPGSTESTITGSTV 938
Score = 31.5 bits (68), Expect = 0.70
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Frame = -2
Query: 311 STPTVVFSVFLTA-LLMVTFTPTVAETPNRVAELVPALTVEPTN--CTPPLFVTIVSLAD 141
ST S +TA +VT TV PN V P + PT TP VT+ S
Sbjct: 326 STAVTKPSTVVTAPSTVVTVPSTVVTKPNTVVTSSPTVATTPTTVVTTPSTVVTVPSTVV 385
Query: 140 YVTTSIRLRTISALEVPS---NMGNAVFGKRGNGIYGLRTGSSWP 15
V T++ + + PS + V R I TG S P
Sbjct: 386 TVPTTVVTNPSTVVTAPSTVVTVPTTVMTSRSTVITTPTTGGSSP 430
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = -2
Query: 311 STPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVT 132
+ P ++ + +VT P+ A+T + VP TV + T+V++ V
Sbjct: 246 AAPNTTVTISTSPTTVVT-VPSTAQTSSTTTVTVPTTTVTGPTTVVTVPTTVVTIPSTVV 304
Query: 131 TSIRLRTISALEVPSNM 81
TS + + VPS +
Sbjct: 305 TSPITTPSTVVTVPSTV 321
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = -2
Query: 689 STAGTATETPL*TP*SAPPCWPSPTATLLLWTGVVLPTVY----TTLPSMEFPVSDSSLA 522
+T T+ T + TP + PS T L T V T T LPS +S SSL+
Sbjct: 410 TTVMTSRSTVITTPTTGGSS-PSTAGTSLASTAVTTETSIGSSSTPLPSQSTSLSMSSLS 468
Query: 521 TFWSGSSTTEA 489
T+ SST A
Sbjct: 469 TYTPSSSTAGA 479
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 35.9 bits (79), Expect = 0.032
Identities = 28/81 (34%), Positives = 36/81 (44%)
Frame = -2
Query: 311 STPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVT 132
+TPT V T+LL TPTV T V T PT T + T S A VT
Sbjct: 614 TTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVT--VAATTTSKAPVVT 671
Query: 131 TSIRLRTISALEVPSNMGNAV 69
TS L S ++P++ + V
Sbjct: 672 TSPTLAPTSPTKLPTSPPSTV 692
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.23
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Frame = +2
Query: 359 PPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 538
PP A P T PP + TT AP KP T P PP + T K+ P
Sbjct: 192 PPPTTKAPPPPTTKAPPPPTTNKEV-TTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKP 250
Query: 539 T-LGTPLTAVLYRPLAR---PRQSTTITLQSETASKA 637
T P + P+ P +TT+T + T A
Sbjct: 251 TKAAPPAPTPVPNPVPSPPPPPANTTVTEEKTTVPPA 287
>U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical
protein C25H3.6a protein.
Length = 556
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 343 QGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVV 501
+G+ TP G TG P GS L S + +++ + +STP+AASVV
Sbjct: 113 RGITPNTPAGRRVTSTGLP-GSQQRLVSPANGSYAPRSQVSPGESTPVAASVV 164
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 33.1 bits (72), Expect = 0.23
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 5/192 (2%)
Frame = +1
Query: 133 VT*SANETIVTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVD 312
VT + + TNS GSTV S++ G S+T + + +N +T TTV
Sbjct: 840 VTTQGSSSTQTNSN-TGSTGSTVTNPPVSSSTSGSSSTQPIASSTANPGSSTSGTTV--- 895
Query: 313 CLHISSCVTVQGLVVTTPPGPSRIQTGNPVG-----SATSLSSSVTDNVRAQAEANQVDS 477
VT QG +T P+ TG+ V S+TS SSS T + + AN S
Sbjct: 896 -------VTTQG-SSSTQTNPNTGSTGSTVTQPSAFSSTSASSS-TQPIASSTTANPGSS 946
Query: 478 TPIAASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADHGVH 657
T ++ + S+TG++ + V T G +T + + V + Q V
Sbjct: 947 TS-GPTIASTQGSSSTQTNSNTGSTTVATTV-TQGSSTEGNTGSTTV-NSQSSSVASTVA 1003
Query: 658 SGVSVAVPAVEQ 693
S S V + Q
Sbjct: 1004 SSTSNIVSSTSQ 1015
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 383 SKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPL 499
S+P + G PP PA P P + P T+P +PPP+
Sbjct: 109 SRPSSSYGRPPQFYPAQPGPAVPAVIPPVVTQPIVPPPV 147
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 644 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 507
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 644 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 507
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.3 bits (70), Expect = 0.40
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 2/154 (1%)
Frame = +1
Query: 154 TIVTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSC 333
T VT +GST G++S + S+T+G S A ++ + TV S
Sbjct: 1468 TTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMG-----STAGSSSPQPTV--------SS 1514
Query: 334 VTVQGLVVTTPPGPSRIQTGNPVGSA-TSLSSSVTDNVRAQAEANQVDSTPIAASVVDEP 510
+V T G S + VG+ TS+SSS N + ST + S
Sbjct: 1515 TSVPSSTGATSSGSSTTVGSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGSSST 1574
Query: 511 DQKVAKELSDTGNSIDG-SVV*TVGKTTPVHNNN 609
+ ++TG+S G +V T G ++ N+N
Sbjct: 1575 QSIPSSTAANTGSSTSGPTVATTQGSSSTQTNSN 1608
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.53
Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 3/122 (2%)
Frame = +1
Query: 151 ETIVTNSGGVQFVGSTVRAGT--NSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHI 324
+T T S +T A T +S T SAT T + T
Sbjct: 150 DTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEASATTAATTTQ- 208
Query: 325 SSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTD-NVRAQAEANQVDSTPIAASVV 501
S T + VTT G + S T+ SVTD +A A + + A+
Sbjct: 209 ESITTTESDSVTTTEGSATTGAATTKDSVTTTEGSVTDKETTTEASATTTEGSATQATTA 268
Query: 502 DE 507
+E
Sbjct: 269 EE 270
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.9 bits (69), Expect = 0.53
Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 3/122 (2%)
Frame = +1
Query: 151 ETIVTNSGGVQFVGSTVRAGT--NSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHI 324
+T T S +T A T +S T SAT T + T
Sbjct: 150 DTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEASATTAATTTQ- 208
Query: 325 SSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTD-NVRAQAEANQVDSTPIAASVV 501
S T + VTT G + S T+ SVTD +A A + + A+
Sbjct: 209 ESITTTESDSVTTTEGSATTGAATTKDSVTTTEGSVTDKETTTEASATTTEGSATQATTA 268
Query: 502 DE 507
+E
Sbjct: 269 EE 270
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.53
Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 3/122 (2%)
Frame = +1
Query: 151 ETIVTNSGGVQFVGSTVRAGT--NSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHI 324
+T T S +T A T +S T SAT T + T
Sbjct: 150 DTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEASATTAATTTQ- 208
Query: 325 SSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTD-NVRAQAEANQVDSTPIAASVV 501
S T + VTT G + S T+ SVTD +A A + + A+
Sbjct: 209 ESITTTESDSVTTTEGSATTGAATTKDSVTTTEGSVTDKETTTEASATTTEGSATQATTA 268
Query: 502 DE 507
+E
Sbjct: 269 EE 270
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.9 bits (69), Expect = 0.53
Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 3/122 (2%)
Frame = +1
Query: 151 ETIVTNSGGVQFVGSTVRAGT--NSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHI 324
+T T S +T A T +S T SAT T + T
Sbjct: 150 DTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEASATTAATTTQ- 208
Query: 325 SSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTD-NVRAQAEANQVDSTPIAASVV 501
S T + VTT G + S T+ SVTD +A A + + A+
Sbjct: 209 ESITTTESDSVTTTEGSATTGAATTKDSVTTTEGSVTDKETTTEASATTTEGSATQATTA 268
Query: 502 DE 507
+E
Sbjct: 269 EE 270
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -1
Query: 231 QPGCRVSTCSHSRAYELYASTVRHNR 154
Q G VSTCSHS YE Y S NR
Sbjct: 1199 QYGVDVSTCSHSMHYECYRSLAEANR 1224
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.92
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -2
Query: 689 STAGTATETPL*TP*SAPPCWPSPTATLLL-WTGVVLPTVYTTLPSMEFPVSDSSLATFW 513
ST T T TP T + +PT T T PT TT P+ + L +
Sbjct: 86 STTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEVF 145
Query: 512 SGSSTTEAAIGVEST 468
S+TTEA +T
Sbjct: 146 RTSTTTEAPFFTTTT 160
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.1 bits (67), Expect = 0.92
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -2
Query: 311 STPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVT 132
+TPT + T T TPT T + E + T T T P T S + T
Sbjct: 274 TTPTTTTTTPTTTPTTTTTTPTTTTTESTTTE-TTSTTTPTTTTTAPTTTTTASTTTFKT 332
Query: 131 TSIRLRT 111
T+I T
Sbjct: 333 TTITTTT 339
>AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical
protein R52.3 protein.
Length = 379
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 646 DPPRLAGRLRLQRY--CCGLAWSCQRSIQHCRQWSSQC 539
D +A ++R+ +Y C G+ CQ+ I R+WS +C
Sbjct: 114 DHYNIAWKIRILKYEECLGIYLDCQKEIYEGRKWSIKC 151
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/90 (21%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 271 NAVKNTEKTTVGVD-CLH-ISSCVTVQGLVVTTPPGPSR-IQTGNPVGSATSLSSSVTDN 441
N V ++ T+ +D C + +S + + PP + + + + +GS+ +S+S+ ++
Sbjct: 334 NPVASSHPTSSSMDDCPYGRASIARAKDYQLRLPPHSQKGLSSSSLLGSSYPVSNSIKND 393
Query: 442 VRAQAEANQVDSTPIAASVVDEPDQKVAKE 531
+ Q+E+N+ D+T I+ S + ++ +
Sbjct: 394 ITKQSESNRADATNISFSSFESTKSDISPQ 423
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 2/116 (1%)
Frame = +1
Query: 214 NSATRLGVSATVGV--KVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQ 387
N T + V+ T T + A TE T+ D S T + +T
Sbjct: 173 NVLTDIPVTTTTSTTSSTTTTTATSTTESTSTSTDSTTTES--TTESTTESTSTSTDSTT 230
Query: 388 TGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSI 555
T + S T +S+ TD+ ++ + DST S + + + T S+
Sbjct: 231 TESTTESTTESTSTSTDSTTTESTSTSTDST-TTESTTESTTESTSTSTDSTTTSL 285
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 367 PGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDS--TPIAASVVDE--PDQKVAKEL 534
P P+ + G +AT+ +++V+++V A D+ TP AA V D+ DQ + +E
Sbjct: 2831 PAPAPEEIGLATPAATNTTNTVSESVAPNASTRGDDTLTTPAAAQVEDQASEDQHIEEEP 2890
Query: 535 SDTGNSIDGS 564
+ G DG+
Sbjct: 2891 MEVGED-DGA 2899
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Frame = +1
Query: 160 VTNSGGVQFVGSTVRAGTNSATRLGVSATVGV----------KVTMSNAVKNTEKTTVGV 309
+T+ G Q GST T +T G ++T G + ++S + + T V
Sbjct: 1149 MTSQGSTQIPGSTGSTVTQPSTGSGSTSTSGEITSQGSTQTPRSSLSTSPAISTSTQQSV 1208
Query: 310 DCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVT 435
S VT V + S + TG+ GS+TS SSS T
Sbjct: 1209 STNSPGSTVTQPSTVRGSTSSGSTVTTGSTEGSSTSGSSSAT 1250
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 359 PPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPP 493
PP GP G P G PP P+ + AP+ P R Q PP
Sbjct: 194 PPGYGPYGYAPQASTGYPPP--PSQQSPYAPQAGPPPQMRHQYPP 236
>Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical
protein F49C5.3 protein.
Length = 551
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 261 HHEQCGQ--KYREDHRRCGLPPHKLLRYGSG 347
HH + GQ K+RE H+R P +++R+ +G
Sbjct: 502 HHLKWGQVRKFREQHQRMETSPEEMIRFATG 532
>Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical
protein T09F5.2 protein.
Length = 182
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 434 PTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLY 571
P++ +P + T +LPP + T + R+ P+ TP +LY
Sbjct: 101 PSSISPAPDKTEPTSSELPPTITKELTAAISRSEPSTSTPAPTILY 146
>U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical
protein F13B9.6 protein.
Length = 390
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 70 TALPMFEGTSRALIVLSLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNSATRLGVSATV 249
T P+F GT+ +++ + + ++VT SGG + + G + V A V
Sbjct: 124 TLPPIFNGTNA-------LQITAMNDDNSVVTGSGGSPALTMQILEGHGISGSPVVKAAV 176
Query: 250 GVKVTMSNAVKNT 288
G ++T+ A++NT
Sbjct: 177 GQRITLDIALQNT 189
>L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical
protein C13G5.2 protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 387 LDPAGPRWGGNNQALNRNAGAYV-EAIHTDGGLLGIFDR 274
L+P+G + G AL+RNA YV + +L IFD+
Sbjct: 100 LEPSGHGFRGGIAALSRNASHYVISTVGRSSNILNIFDK 138
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 427 SVTDNVRAQAEANQVDSTPIAASV-VDEPDQ--KVAKELSDTGNSIDGSVV*TVGKTTPV 597
S+ D R E +++D ++ V +P++ ++ E+S + +DG TVG T +
Sbjct: 1018 SIEDQERETRENDKIDDGEELFNIGVWDPEEAVRIGVEISSRDDRMDGEDQDTVGLTQGL 1077
Query: 598 HNNNVAVGDGQ 630
H+ N++ D +
Sbjct: 1078 HDGNISDEDDE 1088
>AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical
protein Y48A6B.8 protein.
Length = 551
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 261 HHEQCGQ--KYREDHRRCGLPPHKLLRYGSG 347
HH + GQ K+RE H+R P +++R+ +G
Sbjct: 502 HHLKWGQVRKFREQHQRMETSPEEVIRFATG 532
>Z78416-8|CAB01683.2| 588|Caenorhabditis elegans Hypothetical
protein E01G6.3 protein.
Length = 588
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Frame = -1
Query: 714 ETCLSLLLFHGWNSNGNSAV---NTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 544
+ C +++ +HG N +SAV +T I + + +I G+ LY + N VP
Sbjct: 114 KNCSTVVYYHGGGINMDSAVQFNDTFILERYVKENVVFIIPAYRLGIFGLLYFGSNNLVP 173
Query: 543 SV-----GQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHV 439
+ F+ I+N GG+ ++L+G S GAH+
Sbjct: 174 QNLAIHDCELALRFIHQEISNFGGHKDDINLMGHSAGAHI 213
>Z69717-4|CAA93533.2| 588|Caenorhabditis elegans Hypothetical
protein E01G6.3 protein.
Length = 588
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Frame = -1
Query: 714 ETCLSLLLFHGWNSNGNSAV---NTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 544
+ C +++ +HG N +SAV +T I + + +I G+ LY + N VP
Sbjct: 114 KNCSTVVYYHGGGINMDSAVQFNDTFILERYVKENVVFIIPAYRLGIFGLLYFGSNNLVP 173
Query: 543 SV-----GQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHV 439
+ F+ I+N GG+ ++L+G S GAH+
Sbjct: 174 QNLAIHDCELALRFIHQEISNFGGHKDDINLMGHSAGAHI 213
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = -2
Query: 230 NRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTSIRLRTISALEVPSNMGNAVFGKRGN 51
N V L+ EP C+ P F I + V+ S ++ I + +P+N A+ GK+G
Sbjct: 210 NEVVARGRKLSQEPLPCSVPQFQPIPA----VSNSSKVTII--IPIPANKCGAIIGKKGE 263
Query: 50 GIYGLRTGSSWPF 12
+ LR+ ++ F
Sbjct: 264 QMRKLRSWTNCDF 276
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/61 (36%), Positives = 23/61 (37%)
Frame = -1
Query: 510 WLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNA 331
W N GGGNWG G G + G G GG R G G R GG R
Sbjct: 72 WGNNGGGGNWG-----GNGGGGNGGGGRGGGGGGGGGRGGG---GGGRGGGGGGGGGRGG 123
Query: 330 G 328
G
Sbjct: 124 G 124
>U53335-4|AAL27231.1| 504|Caenorhabditis elegans Hypothetical
protein C55C3.3 protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 367 PGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDS-TPIAASVVDEPDQKVAKELSDT 543
P PS P + S S V N R +E +QVD+ +P+ +V +E+
Sbjct: 234 PAPSPKSEKGPAEQSLSEPSPVPGNNRRNSETSQVDTISPVPTKLVGTQSPSERQEIEQM 293
Query: 544 GNS 552
NS
Sbjct: 294 PNS 296
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = +2
Query: 410 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 589
PP C P P CAP P+ P PPP+ Q P CP P + P P
Sbjct: 27 PPPCPPPPPPMCAP--PPL----PCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Query: 590 RQS 598
S
Sbjct: 81 MPS 83
>AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical
protein Y51H4A.7 protein.
Length = 670
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -1
Query: 531 FLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGGNN 352
F G V L N GG WG V GF + +A R+A G N W GN
Sbjct: 577 FRGATWVALHNGGGVGWGDVINGGFGIVLDGSSDAARRAEGMLNWDVPNGVTRRSWSGNA 636
Query: 351 QA 346
+A
Sbjct: 637 KA 638
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 3.7
Identities = 29/77 (37%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Frame = -1
Query: 501 NNGGGNWGR-VHLIGFSLGAH--VVGNAGRQAGGRPN---RVTGLDPAGPR--WGGNNQA 346
NNGGG WGR G G + GN G GGR + G G R WGGNN
Sbjct: 51 NNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNN-- 108
Query: 345 LNRNAGAYVEAIHTDGG 295
N G + + DGG
Sbjct: 109 -NGGGGNWGGGGNNDGG 124
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 225 PVGGFCHRWGKSHHEQCGQKYREDHRRCGLPP 320
P G +CH H C R+ RC LPP
Sbjct: 21 PTGFWCHEGQSEHSFYCCPSSRKFANRCHLPP 52
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 28.7 bits (61), Expect = 4.9
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 166 NSGGVQF-VGSTVRAGTNSATRLGVSATV-GVKVTMS--NAVKNTEKTTVGVDCLHISSC 333
N+GGVQ G + T+ + L +A+V GVK+ +S N + C S+C
Sbjct: 54 NNGGVQRDEGGYCNSNTDCRSGLYCTASVNGVKICLSTSNGGGGNGFPSGNGGCQTSSNC 113
Query: 334 VTVQGLVVTTPPGPSRIQTGNPVGSA 411
VVT G +IQTG V A
Sbjct: 114 QYGSVCVVTNGQGNCQIQTGGYVSPA 139
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 28.7 bits (61), Expect = 4.9
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 166 NSGGVQF-VGSTVRAGTNSATRLGVSATV-GVKVTMS--NAVKNTEKTTVGVDCLHISSC 333
N+GGVQ G + T+ + L +A+V GVK+ +S N + C S+C
Sbjct: 54 NNGGVQRDEGGYCNSNTDCRSGLYCTASVNGVKICLSTSNGGGGNGFPSGNGGCQTSSNC 113
Query: 334 VTVQGLVVTTPPGPSRIQTGNPVGSA 411
VVT G +IQTG V A
Sbjct: 114 QYGSVCVVTNGQGNCQIQTGGYVSPA 139
>AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical
protein VW02B12L.3 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 356 LPPHLGPAGSKPVT-----LLGLPPACRPALPTTCAPKLK 460
LP G GS+PV + PP RPA P AP +K
Sbjct: 136 LPALKGSTGSRPVAAPARPVAAAPPKPRPAAPAVAAPAVK 175
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/95 (25%), Positives = 38/95 (40%)
Frame = +2
Query: 239 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPA 418
+PP G P M I PP + + L + +PP + G P ++ PP+
Sbjct: 82 MPPPGMGPPPFMPPPIGMPPPPLGMPPPHI-GLGAAPYAVPPPMSLLGPPPFSV---PPS 137
Query: 419 CRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKL 523
P + AP + P PPP S+ +K+
Sbjct: 138 VPPPTSSAAAPIVPPPPVQSTAQPPPSGTSEAEKM 172
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/95 (25%), Positives = 38/95 (40%)
Frame = +2
Query: 239 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPA 418
+PP G P M I PP + + L + +PP + G P ++ PP+
Sbjct: 105 MPPPGMGPPPFMPPPIGMPPPPLGMPPPHI-GLGAAPYAVPPPMSLLGPPPFSV---PPS 160
Query: 419 CRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKL 523
P + AP + P PPP S+ +K+
Sbjct: 161 VPPPTSSAAAPIVPPPPVQSTAQPPPSGTSEAEKM 195
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/95 (25%), Positives = 38/95 (40%)
Frame = +2
Query: 239 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPA 418
+PP G P M I PP + + L + +PP + G P ++ PP+
Sbjct: 355 MPPPGMGPPPFMPPPIGMPPPPLGMPPPHI-GLGAAPYAVPPPMSLLGPPPFSV---PPS 410
Query: 419 CRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKL 523
P + AP + P PPP S+ +K+
Sbjct: 411 VPPPTSSAAAPIVPPPPVQSTAQPPPSGTSEAEKM 445
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 410 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLT 559
PP P PTT PK++P + P+ PP + P+ P P T
Sbjct: 377 PPKTEP--PTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPPT 424
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = -2
Query: 686 TAGTATETPL*TP*SAPPCWPSPTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSG 507
T+ +++ T + TP S SP++T+ T P+ TT PS S+ ++ S
Sbjct: 463 TSSSSSSTTVTTPTSTESTSTSPSSTVT--TSTTAPSTSTTGPSSSSSTPSSTASS--SV 518
Query: 506 SSTTEAAIGVEST*LASAWARTLSVTLDD 420
SST + ST +S ++ + T D
Sbjct: 519 SSTASSTQSSTSTQQSSTTTKSETTTSSD 547
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = -2
Query: 686 TAGTATETPL*TP*SAPPCWPSPTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSG 507
T+ +++ T + TP S SP++T+ T P+ TT PS S+ ++ S
Sbjct: 463 TSSSSSSTTVTTPTSTESTSTSPSSTVT--TSTTAPSTSTTGPSSSSSTPSSTASS--SV 518
Query: 506 SSTTEAAIGVEST*LASAWARTLSVTLDD 420
SST + ST +S ++ + T D
Sbjct: 519 SSTASSTQSSTSTQQSSTTTKSETTTSSD 547
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
Frame = +2
Query: 353 LLPPHLGPAGSKPVTLLGLPPACRPALPTTC---------APKLKPIKWTRPQLPPPLLM 505
LLPP + P + TL+G+ +P P AP P P PPP L
Sbjct: 93 LLPPAVAPPTNGQETLVGINNPVQPPPPVQYQNQGPQYIEAPPPPPSPPPPPPPPPPQLQ 152
Query: 506 SQTKKLPRNCPTLGTPLT 559
Q +LP T P T
Sbjct: 153 QQQVQLPLQDATTLRPST 170
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 675 SNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSV 538
S+GNS+VN M + + S V+ +D G Y A NG+ V
Sbjct: 289 SDGNSSVNLMSNTNIESDSGLGVVHIDGAGQGTDNYVVASNGLKFV 334
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.5
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Frame = +2
Query: 317 ST*APALRFRAWLLPPH--LGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLP 490
+T APA +F + +PP L KP+ L P P + P P++P
Sbjct: 197 ATIAPAPKFDIFTVPPPPPLFQEWEKPILSLSNPFTLNPLMKMFTTPSPPQTLAPLPKIP 256
Query: 491 PPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIM 649
P K LP L P Y PL R+S + +AGR++
Sbjct: 257 EPNPYEIKKGLPEPQFKLQDP----FYNPLFPSRKSKMFDFLA--GGEAGRLL 303
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 433 TDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNN 609
TDN + E+N + ++ I S ++ KV+K++ +GN ++ + K NNN
Sbjct: 671 TDNTTSNTESN-IKTSSIKESNIETSSLKVSKKIEGSGNKMNKKSKKSDDKKISKANNN 728
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 501 NNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNR--VTGLDPAGPRWGGNN 352
N GG WG + G + G+ + N G GG + G + WG NN
Sbjct: 315 NEGGDQWGSNNNGGDNYGSELSNNWGGSNGGSGSNGGSGGGNTDNDNWGSNN 366
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 501 NNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNR--VTGLDPAGPRWGGNN 352
N GG WG + G + G+ + N G GG + G + WG NN
Sbjct: 315 NEGGDQWGSNNNGGDNYGSELSNNWGGSNGGSGSNGGSGGGNTDNDNWGSNN 366
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +2
Query: 413 PACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPR 592
P +P T P L P++ LPP Q + P + TP+ + ++ RP
Sbjct: 338 PTSQPVQVMTPPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQ-TTRPP 396
Query: 593 QSTTITLQSET 625
T T + T
Sbjct: 397 MPTYATTPATT 407
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +2
Query: 413 PACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPR 592
P +P T P L P++ LPP Q + P + TP+ + ++ RP
Sbjct: 435 PTSQPVQVMTPPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQ-TTRPP 493
Query: 593 QSTTITLQSET 625
T T + T
Sbjct: 494 MPTYATTPATT 504
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,505,837
Number of Sequences: 27780
Number of extensions: 515512
Number of successful extensions: 1905
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -