Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17d09
(762 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p pro... 79 9e-15
AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA... 79 9e-15
AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p pro... 74 2e-13
AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA ... 74 2e-13
AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p pro... 74 2e-13
AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-P... 74 2e-13
AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p pro... 60 3e-09
AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-P... 60 3e-09
>AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p
protein.
Length = 250
Score = 78.6 bits (185), Expect = 9e-15
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIE-RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNK 508
SLCP F + + P ++ L + + P+GK++ + + + F C HGP ECYGNK
Sbjct: 33 SLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHHGPNECYGNK 92
Query: 507 LHACAIDVIGNITIAVMYN---------SCMMDLNQKNHGSDDLAADACGNKFDIDS-SP 358
+HACAI+ I + V Y +C+M KN + C ++ I++
Sbjct: 93 VHACAIEHIQANSYQVEYTRESLTMDFINCLMKAG-KNFPDNVYPGQRCASENHINNWEN 151
Query: 357 IKRCAKGDRGDELLKKYGDESK--KANYLFVPYILVN 253
IK CA G LL+K G+ + K VP IL N
Sbjct: 152 IKTCANSTEGSVLLRKAGESTMRLKEPLTSVPTILFN 188
>AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA
protein.
Length = 250
Score = 78.6 bits (185), Expect = 9e-15
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIE-RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNK 508
SLCP F + + P ++ L + + P+GK++ + + + F C HGP ECYGNK
Sbjct: 33 SLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHHGPNECYGNK 92
Query: 507 LHACAIDVIGNITIAVMYN---------SCMMDLNQKNHGSDDLAADACGNKFDIDS-SP 358
+HACAI+ I + V Y +C+M KN + C ++ I++
Sbjct: 93 VHACAIEHIQANSYQVEYTRESLTMDFINCLMKAG-KNFPDNVYPGQRCASENHINNWEN 151
Query: 357 IKRCAKGDRGDELLKKYGDESK--KANYLFVPYILVN 253
IK CA G LL+K G+ + K VP IL N
Sbjct: 152 IKTCANSTEGSVLLRKAGESTMRLKEPLTSVPTILFN 188
>AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p
protein.
Length = 213
Score = 74.1 bits (174), Expect = 2e-13
Identities = 47/145 (32%), Positives = 71/145 (48%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIERLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKL 505
SLCP R F L P E Y++I + P+GK+++ E+NG F CQHGP EC GN+L
Sbjct: 43 SLCPDSRNFMHQ-LGPVYEEFGDYIDILLVPFGKSQS-ERNGAI-FHCQHGPAECKGNRL 99
Query: 504 HACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDLAADACGNKFDIDSSPIKRCAKGDRGD 325
+C I+ N V + C M D D C N+ + + + C + G
Sbjct: 100 QSCVINSTANQAAQVKFVVCQM------LAPDYSRIDQCANEAGL-LTDVVHCLSSETGT 152
Query: 324 ELLKKYGDESKKANYLFVPYILVNG 250
+L + +K+ + F+P I+ NG
Sbjct: 153 KLQLQAELVTKQYSPSFIPTIVYNG 177
>AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA
protein.
Length = 213
Score = 74.1 bits (174), Expect = 2e-13
Identities = 47/145 (32%), Positives = 71/145 (48%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIERLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKL 505
SLCP R F L P E Y++I + P+GK+++ E+NG F CQHGP EC GN+L
Sbjct: 43 SLCPDSRNFMHQ-LGPVYEEFGDYIDILLVPFGKSQS-ERNGAI-FHCQHGPAECKGNRL 99
Query: 504 HACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDLAADACGNKFDIDSSPIKRCAKGDRGD 325
+C I+ N V + C M D D C N+ + + + C + G
Sbjct: 100 QSCVINSTANQAAQVKFVVCQM------LAPDYSRIDQCANEAGL-LTDVVHCLSSETGT 152
Query: 324 ELLKKYGDESKKANYLFVPYILVNG 250
+L + +K+ + F+P I+ NG
Sbjct: 153 KLQLQAELVTKQYSPSFIPTIVYNG 177
>AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p
protein.
Length = 207
Score = 73.7 bits (173), Expect = 2e-13
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIERLNQ--YLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGN 511
+LCP C F + L P++ R ++ + ++ + PYG A+T + +G E CQHG EC N
Sbjct: 38 ALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTND-DGNVE--CQHGVMECELN 94
Query: 510 KLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDLAADACGNKFDIDSSPIKRCAKGDR 331
HAC ++ +I ++ +CMM +KN + C + + ID +K C K +
Sbjct: 95 AWHACILEH-HDIAQSLKLIACMMR-GKKNR------LEKCADHYQIDVGDVKNCKKTRQ 146
Query: 330 GDELLKKYGDESKKANYLFVPYILVN 253
+++L+KYG E+ K ++ VP + ++
Sbjct: 147 VNDILRKYGKETAKVSFQGVPAVALD 172
>AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-PA
protein.
Length = 207
Score = 73.7 bits (173), Expect = 2e-13
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIERLNQ--YLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGN 511
+LCP C F + L P++ R ++ + ++ + PYG A+T + +G E CQHG EC N
Sbjct: 38 ALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTND-DGNVE--CQHGVMECELN 94
Query: 510 KLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDLAADACGNKFDIDSSPIKRCAKGDR 331
HAC ++ +I ++ +CMM +KN + C + + ID +K C K +
Sbjct: 95 AWHACILEH-HDIAQSLKLIACMMR-GKKNR------LEKCADHYQIDVGDVKNCKKTRQ 146
Query: 330 GDELLKKYGDESKKANYLFVPYILVN 253
+++L+KYG E+ K ++ VP + ++
Sbjct: 147 VNDILRKYGKETAKVSFQGVPAVALD 172
>AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p
protein.
Length = 216
Score = 60.1 bits (139), Expect = 3e-09
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIERLNQY--LNINIYPYGKAKTIEKN--GKYEFICQHGPEECY 517
+LCP F L ++ + + ++ +YP+GKA G+ + CQHG +EC
Sbjct: 39 ALCPDSMSFIRRRLYDALQDNDWWSVTDLKLYPFGKAGFYNNTSTGESQVFCQHGVDECE 98
Query: 516 GNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDLAADACGNKFDIDSSPIKRCAKG 337
N LHAC I+ + +I A CM+ S++L C +D S + C
Sbjct: 99 LNALHACIIETL-DIRKAFNLIYCML-----RSYSNELG--PCSRSMGVDVSKARECKAS 150
Query: 336 DRGDELLKKYGDESKKANYLFVPYIL 259
E+L YG E+ K FVP I+
Sbjct: 151 RTTAEILAPYGKETLKLGISFVPTIV 176
>AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-PA
protein.
Length = 216
Score = 60.1 bits (139), Expect = 3e-09
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = -1
Query: 684 SLCPGCRVFDSAILAPTIERLNQY--LNINIYPYGKAKTIEKN--GKYEFICQHGPEECY 517
+LCP F L ++ + + ++ +YP+GKA G+ + CQHG +EC
Sbjct: 39 ALCPDSMSFIRRRLYDALQDNDWWSVTDLKLYPFGKAGFYNNTSTGESQVFCQHGVDECE 98
Query: 516 GNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDLAADACGNKFDIDSSPIKRCAKG 337
N LHAC I+ + +I A CM+ S++L C +D S + C
Sbjct: 99 LNALHACIIETL-DIRKAFNLIYCML-----RSYSNELG--PCSRSMGVDVSKARECKAS 150
Query: 336 DRGDELLKKYGDESKKANYLFVPYIL 259
E+L YG E+ K FVP I+
Sbjct: 151 RTTAEILAPYGKETLKLGISFVPTIV 176
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,422,432
Number of Sequences: 53049
Number of extensions: 606219
Number of successful extensions: 1216
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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