Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17d08
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p pro...    89   8e-18
AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA p...    89   8e-18
AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-P...    42   7e-04
BT016079-1|AAV36964.1|  922|Drosophila melanogaster LD47749p pro...    30   2.9  
AY052114-1|AAK93538.1|  922|Drosophila melanogaster SD06427p pro...    30   2.9  
AE014297-1680|AAF54941.1|  922|Drosophila melanogaster CG9799-PA...    30   2.9  

>AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p
           protein.
          Length = 95

 Score = 88.6 bits (210), Expect = 8e-18
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = -2

Query: 740 QLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITL 561
           QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     + Y  NA NCWIAA +Y++TL
Sbjct: 22  QLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANRAYNQNAYNCWIAACIYVLTL 79

Query: 560 VVSGHQFWLNNR 525
           ++S  QF++N+R
Sbjct: 80  LLSAQQFYMNSR 91


>AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA
           protein.
          Length = 95

 Score = 88.6 bits (210), Expect = 8e-18
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = -2

Query: 740 QLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITL 561
           QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     + Y  NA NCWIAA +Y++TL
Sbjct: 22  QLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANRAYNQNAYNCWIAACIYVLTL 79

Query: 560 VVSGHQFWLNNR 525
           ++S  QF++N+R
Sbjct: 80  LLSAQQFYMNSR 91


>AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-PA
           protein.
          Length = 107

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 20/56 (35%), Positives = 34/56 (60%)
 Frame = -2

Query: 737 LTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGYTLNAQNCWIAALLYL 570
           L L+G+F+Y++++ LLE LP     P  S E F  + ++ Y   +  C++AA+ YL
Sbjct: 22  LNLLGIFFYVQSLMLLESLPLPHHFP--SQEAFKEQADEAYQDVSTRCFVAAVFYL 75


>BT016079-1|AAV36964.1|  922|Drosophila melanogaster LD47749p
           protein.
          Length = 922

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 260 LPFASNFFQHIATSHQPTYLNK 195
           +PF S  FQ  A +H PTY+NK
Sbjct: 154 VPFRSEEFQITAVTHPPTYINK 175


>AY052114-1|AAK93538.1|  922|Drosophila melanogaster SD06427p
           protein.
          Length = 922

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 260 LPFASNFFQHIATSHQPTYLNK 195
           +PF S  FQ  A +H PTY+NK
Sbjct: 154 VPFRSEEFQITAVTHPPTYINK 175


>AE014297-1680|AAF54941.1|  922|Drosophila melanogaster CG9799-PA
           protein.
          Length = 922

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 260 LPFASNFFQHIATSHQPTYLNK 195
           +PF S  FQ  A +H PTY+NK
Sbjct: 154 VPFRSEEFQITAVTHPPTYINK 175


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,724,012
Number of Sequences: 53049
Number of extensions: 599541
Number of successful extensions: 1695
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)