Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17d07
         (850 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021416-1|AAX33564.1|  887|Drosophila melanogaster LD05154p pro...    29   8.1  
BT001355-1|AAN71110.1|  486|Drosophila melanogaster AT27758p pro...    29   8.1  
AY684632-1|AAV80293.1|  886|Drosophila melanogaster lysosomal en...    29   8.1  
AY058588-1|AAL13817.1|  322|Drosophila melanogaster LD28173p pro...    29   8.1  
AE014297-4590|AAF57043.1|  486|Drosophila melanogaster CG2218-PA...    29   8.1  
AE014297-4000|AAN14087.2|  887|Drosophila melanogaster CG31072-P...    29   8.1  
AE014297-3999|AAN14088.2|  886|Drosophila melanogaster CG31072-P...    29   8.1  

>BT021416-1|AAX33564.1|  887|Drosophila melanogaster LD05154p
           protein.
          Length = 887

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 360 CTLFLLYQRNLICRLPTRCLKTSEFHH 440
           C L + YQ  L CR P RC  T+   H
Sbjct: 479 CQLLIQYQTPLACREPIRCKATTYVDH 505


>BT001355-1|AAN71110.1|  486|Drosophila melanogaster AT27758p
           protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 282 PNHSVPNC-SLQS*YDLDNCL*NVLCQCTLFLLYQRNLICRLPTRCLKTSEFH 437
           P  S  NC S Q  Y++  C   V  +C + L   +  +C++  RC     +H
Sbjct: 430 PPASCINCRSAQFGYEIRTCRHLVCRECLVLLSQDQQCVCKVFFRCADVERYH 482


>AY684632-1|AAV80293.1|  886|Drosophila melanogaster lysosomal
           enzyme receptor protein protein.
          Length = 886

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 360 CTLFLLYQRNLICRLPTRCLKTSEFHH 440
           C L + YQ  L CR P RC  T+   H
Sbjct: 478 CQLLIQYQTPLACREPIRCKATTYVDH 504


>AY058588-1|AAL13817.1|  322|Drosophila melanogaster LD28173p
           protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 282 PNHSVPNC-SLQS*YDLDNCL*NVLCQCTLFLLYQRNLICRLPTRCLKTSEFH 437
           P  S  NC S Q  Y++  C   V  +C + L   +  +C++  RC     +H
Sbjct: 266 PPASCINCRSAQFGYEIRTCRHLVCRECLVLLSQDQQCVCKVFFRCADVERYH 318


>AE014297-4590|AAF57043.1|  486|Drosophila melanogaster CG2218-PA
           protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 282 PNHSVPNC-SLQS*YDLDNCL*NVLCQCTLFLLYQRNLICRLPTRCLKTSEFH 437
           P  S  NC S Q  Y++  C   V  +C + L   +  +C++  RC     +H
Sbjct: 430 PPASCINCRSAQFGYEIRTCRHLVCRECLVLLSQDQQCVCKVFFRCADVERYH 482


>AE014297-4000|AAN14087.2|  887|Drosophila melanogaster CG31072-PB,
           isoform B protein.
          Length = 887

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 360 CTLFLLYQRNLICRLPTRCLKTSEFHH 440
           C L + YQ  L CR P RC  T+   H
Sbjct: 479 CQLLIQYQTPLACREPIRCKATTYVDH 505


>AE014297-3999|AAN14088.2|  886|Drosophila melanogaster CG31072-PA,
           isoform A protein.
          Length = 886

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 360 CTLFLLYQRNLICRLPTRCLKTSEFHH 440
           C L + YQ  L CR P RC  T+   H
Sbjct: 478 CQLLIQYQTPLACREPIRCKATTYVDH 504


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,587,524
Number of Sequences: 53049
Number of extensions: 904394
Number of successful extensions: 2451
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2451
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)