Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17d02
         (345 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        24   1.4  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   1.8  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   3.2  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    22   5.6  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    22   5.6  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    22   5.6  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     22   7.4  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    22   7.4  

>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 253 LLHLTILFLSGIWMAPLVASWAYIIQFWKMN 345
           L+ L++LF  G W  P   S+   + F+  N
Sbjct: 210 LIMLSVLFFQGQWTIPFNRSFTTNVPFYDEN 240


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 342 HLPELDNVRPGGYEWRHPY 286
           HL E ++V PGG + R P+
Sbjct: 26  HLSEQNDVLPGGSQARRPF 44


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 214 VQYCIIFIVC 243
           V YC+IFI+C
Sbjct: 392 VVYCVIFIIC 401


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 225 HYIHCL*NCLIALDHSVPLGDMDG 296
           HY H     L  L+ S PLG+M G
Sbjct: 25  HYRHWANRNLPQLEASFPLGNMKG 48


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 211 LVQYCIIFIVCKIVLLHLTILFLSGIWM 294
           ++ +  +F +    L H  ILFL G+WM
Sbjct: 391 IITFPFLFAIMFGDLGHGLILFLLGMWM 418


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 301 VAPSISPRGTEWSSAIRQFYKQ 236
           V  S  P G   S++I QFY+Q
Sbjct: 37  VMNSYPPMGVPGSASIAQFYQQ 58


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = -1

Query: 339 LPELDNVRPGGYE-WRHPYPREEQNGQVQ*DNFTNNEYNAI 220
           +P  +   PG    W  P P   QNG  Q      N +N +
Sbjct: 509 VPMFETNLPGPSNGWVQPVPSHTQNGPSQPQPQQQNPFNLL 549


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 282 REEQNGQVQ*DNFTNNEYNAILNQN 208
           RE++N   + DN  NN  + +   N
Sbjct: 751 REDENEDTKADNMNNNHSDQLTGDN 775


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,134
Number of Sequences: 2352
Number of extensions: 5207
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)