Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17d02
(345 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 1.3
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 1.8
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 2.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 2.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 2.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 3.1
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 21 4.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 4.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 4.1
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 5.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 20 7.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 20 7.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 20 7.2
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 20 7.2
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 249 NFTNNEYNAILNQNIN 202
N+ NN YN L NIN
Sbjct: 98 NYNNNNYNKKLYYNIN 113
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 249 NFTNNEYNAILNQNIN 202
N+ NN YN L NIN
Sbjct: 98 NYNNNNYNKKLYYNIN 113
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 249 NFTNNEYNAILNQNIN 202
N+ NN YN L NIN
Sbjct: 98 NYNNNNYNKKLYYNIN 113
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 249 NFTNNEYNAILNQNIN 202
N+ NN YN L NIN
Sbjct: 98 NYNNNNYNKKLYYNIN 113
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 1.3
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNINQKY 193
+N+ NN YN N N + Y
Sbjct: 336 NNYNNNNYNNNYNNNCKKLY 355
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 1.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 239 TMNIMQY*TKTLIKNIHFTILIFY 168
T NI + L+K + +LIFY
Sbjct: 4 TNNIAAFQNVVLVKKVKIVLLIFY 27
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 2.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 249 NFTNNEYNAILNQNINQKY 193
N NN YN N N N Y
Sbjct: 95 NNYNNNYNNNYNNNYNNNY 113
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 2.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 249 NFTNNEYNAILNQNINQKY 193
N NN YN N N N Y
Sbjct: 95 NNYNNNYNNNYNNNYNNNY 113
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 2.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNINQKYS 190
+N+ NN YN N N Y+
Sbjct: 327 NNYNNNNYNNNYNNYNNNNYN 347
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -2
Query: 212 KTLIKNIHFTILIFYEILCTLYSLRIKTN 126
++++ I+ + +E+ CT L +KTN
Sbjct: 683 RSVLYKIYLNTMESHEVRCTAVFLLMKTN 711
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 21.0 bits (42), Expect = 4.1
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = -1
Query: 342 HLPELDNVRPG---GYEWRHPYPREEQNGQ 262
H+P + P EW +P E+ GQ
Sbjct: 102 HIPTAPPIPPEIQRALEWNAAHPEEDDGGQ 131
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNI 205
+N+ NN YN L NI
Sbjct: 101 NNYNNNNYNKKLYYNI 116
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNI 205
+N+ NN YN L NI
Sbjct: 101 NNYNNNNYNKKLYYNI 116
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 20.6 bits (41), Expect = 5.4
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +1
Query: 196 FLINVLVQYCIIFIVCKIVLLHLTILFLSGIWMAPLVASWAYIIQF 333
F + + C FI + L + F+ IW+ L + IQF
Sbjct: 148 FTVERYIAICHPFISHTMSKLSRAVKFIIVIWLLALCLAVPQAIQF 193
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNIN 202
+N+ NN Y + NIN
Sbjct: 100 NNYNNNNYKKLQYYNIN 116
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNIN 202
+N+ NN Y + NIN
Sbjct: 100 NNYNNNNYKKLQYYNIN 116
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNIN 202
+N+ NN Y + NIN
Sbjct: 100 NNYNNNNYKKLQYYNIN 116
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 252 DNFTNNEYNAILNQNIN 202
+N+ NN Y + NIN
Sbjct: 100 NNYNNNNYKKLQYYNIN 116
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 219 ILHYIHCL*NCLIALDHSVPLGDMD 293
IL ++ C+IA D++ DMD
Sbjct: 5 ILLFVLVTITCVIAEDYTTKYDDMD 29
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.2 bits (40), Expect = 7.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 197 NIHFTILIFYEILCTLYSLRI 135
NI++ I++ + + L SLRI
Sbjct: 112 NIYYIIILAWALFYLLVSLRI 132
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.2 bits (40), Expect = 7.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 197 NIHFTILIFYEILCTLYSLRI 135
NI++ I++ + + L SLRI
Sbjct: 165 NIYYIIILAWALFYLLVSLRI 185
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 219 ILHYIHCL*NCLIALDHSVPLGDMD 293
IL ++ C+IA D++ DMD
Sbjct: 5 ILLFVLVTITCVIAEDYTTKYDDMD 29
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,729
Number of Sequences: 438
Number of extensions: 1680
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7812315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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