Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17c24
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 66 4e-11
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 66 4e-11
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 62 4e-10
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 58 6e-09
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 56 4e-08
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 37 0.015
Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical pr... 36 0.044
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 35 0.059
U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL110487-4|CAB54427.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z70308-11|CAA94343.4| 378|Caenorhabditis elegans Hypothetical p... 30 2.2
U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical pr... 30 2.2
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 30 2.2
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical ... 30 2.2
AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical... 29 3.9
AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical... 29 3.9
AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H... 29 3.9
AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H... 29 3.9
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z50859-1|CAA90726.1| 208|Caenorhabditis elegans Hypothetical pr... 28 8.9
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 65.7 bits (153), Expect = 4e-11
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Frame = -3
Query: 768 VWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGITLN-PELQLLSIPAFMIISSALS 592
+W IM ++ L+G+ + Y++ I R +G+T N P + + A +I + +S
Sbjct: 302 LWPMSIAIMMML--AQQLSGINVAMFYSTVIFRGAGLTGNEPFYATIGMGAVNVIMTLIS 359
Query: 591 IMLVE--RMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFAT-PGWLPIVAIVATVSCYA 421
+ LV+ + GR+ LL S L L +Q +G + I ++ V +A
Sbjct: 360 VWLVDHPKFGRRSLLLAGLTGMFVSTLLLVGALTIQNSGGDKWASYSAIGFVLLFVISFA 419
Query: 420 AGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXXXXXXXXXX 241
G +P+ +SE+F+ R S + W + + ++ PI ++
Sbjct: 420 TGPGAIPWFFVSEIFDSSARGNANSIAVMVNWAANLLVGLTFLPINNLMQQYSFFIFSGF 479
Query: 240 XXXXXXVTALFFLPETKGKSVEEIEFELKAK 148
T F +PETKGKS+E+I+ E + +
Sbjct: 480 LAFFIFYTWKF-VPETKGKSIEQIQAEFEKR 509
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 65.7 bits (153), Expect = 4e-11
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Frame = -3
Query: 768 VWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGITLN-PELQLLSIPAFMIISSALS 592
+W IM ++ L+G+ + Y++ I R +G+T N P + + A +I + +S
Sbjct: 284 LWPMSIAIMMML--AQQLSGINVAMFYSTVIFRGAGLTGNEPFYATIGMGAVNVIMTLIS 341
Query: 591 IMLVE--RMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFAT-PGWLPIVAIVATVSCYA 421
+ LV+ + GR+ LL S L L +Q +G + I ++ V +A
Sbjct: 342 VWLVDHPKFGRRSLLLAGLTGMFVSTLLLVGALTIQNSGGDKWASYSAIGFVLLFVISFA 401
Query: 420 AGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXXXXXXXXXX 241
G +P+ +SE+F+ R S + W + + ++ PI ++
Sbjct: 402 TGPGAIPWFFVSEIFDSSARGNANSIAVMVNWAANLLVGLTFLPINNLMQQYSFFIFSGF 461
Query: 240 XXXXXXVTALFFLPETKGKSVEEIEFELKAK 148
T F +PETKGKS+E+I+ E + +
Sbjct: 462 LAFFIFYTWKF-VPETKGKSIEQIQAEFEKR 491
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 62.1 bits (144), Expect = 4e-10
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Frame = -3
Query: 750 LIMFVIITTHGLNGVFTIVTYASTILRASGITLN-PELQLLSIPAFMIISSALSIMLVE- 577
++ +++ + +G+ + Y++ I + +G++ N P + +I++ + L++
Sbjct: 308 IVSILMMFSQQFSGISAVTFYSTLIFKRNGLSGNEPMYATVGFGCIKLIATFGCLFLIDH 367
Query: 576 -RMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFATPGWLPIVAIVATVSCYAAGILPLP 400
+ GRK L S + TL + G+ ++ ++ I++ V +A G P+P
Sbjct: 368 PKFGRKRLHIAGLSGMCISSILIVITLTLSNAGYHWASYMNVLFILSFVVTFAFGPGPIP 427
Query: 399 FVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXXXXXXXXXXXXXXXXV 220
+ SE+F+ R + + T+ W+ +++ ++ PI I+
Sbjct: 428 WFFTSELFDSATRGRAAAVSATSNWVANWMVGLTFLPINNIIHQYAFLMFTFFTFTFAIF 487
Query: 219 TALFFLPETKGKSVEEIEFEL 157
T F+PETKGKS I EL
Sbjct: 488 T-WKFVPETKGKSPSAIRKEL 507
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 58.4 bits (135), Expect = 6e-09
Identities = 43/214 (20%), Positives = 88/214 (41%), Gaps = 2/214 (0%)
Frame = -3
Query: 792 FLEFFKQPVWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGIT-LNPELQLLSIPAF 616
F E F +P R + +++ G + +++ + +G+T + L+I
Sbjct: 311 FRELFTRPDLRIPLAVSIIVMIAQQFTGCTAVFAFSTDMFLNAGLTPVIARFSTLAIGIV 370
Query: 615 MIISSALSIMLVERMGRKFLLAGTYIVSAFSCGTLAT-TLLMQENGFATPGWLPIVAIVA 439
+ + S L+ ++GR++L + L+ T L + I ++V
Sbjct: 371 YFLFACTSPFLIHKVGRRWLSLFQLASCMVALMLLSLFTFLQNYENIEWARYGTIFSLVF 430
Query: 438 TVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXXXX 259
+ Y G P+P++I SE+F Q RA ++ + W +F+ + SY P +++
Sbjct: 431 YMCVYGVGS-PIPWIIASELFTQQFRATAVTVSVFVAWTFAFIVSTSYLPFQQLVGITFS 489
Query: 258 XXXXXXXXXXXXVTALFFLPETKGKSVEEIEFEL 157
+ LPET+ + + EI E+
Sbjct: 490 YFPFIIGLAVFGIFIYVLLPETRDRPMVEIVTEV 523
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/99 (27%), Positives = 51/99 (51%)
Frame = -3
Query: 462 LPIVAIVATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPIT 283
LPI+A + +++G LP+V+ SE + R+ ++ T+ W+ + + A +Y +T
Sbjct: 466 LPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNLIIALTYLSLT 525
Query: 282 EILXXXXXXXXXXXXXXXXXVTALFFLPETKGKSVEEIE 166
+++ + LF +PETKG S+EE+E
Sbjct: 526 QVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVE 564
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 52.4 bits (120), Expect = 4e-07
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Frame = -3
Query: 774 QPVWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGITLNPELQLLSIPAFMI-ISSA 598
QPV RRGFL+ + T V+ +V Y++ L +G + + + F+ +S+
Sbjct: 262 QPV-RRGFLLG--LATMQLTASVWPVVFYSTDFLMDAGFSYELSESVSTGMLFLSSLSTI 318
Query: 597 LSIMLVERMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFATPGWLPIVAIVATVSCYAA 418
+ + +VE+ RK+LL GT V+ + + + ++ + G+ I+ ++ Y+
Sbjct: 319 VGMFIVEKYSRKWLLIGTASVNIAAILVFSLSAILSHY-WTWIGYGCIICLILHGISYSV 377
Query: 417 GILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXXXXXXXXXXX 238
+ P+ + I SE+ RA S ++ ++ V A P+ + +
Sbjct: 378 AMGPIAWFITSELVPINFRAASQSLVLALNHTVALVLAFLTFPLYKTIGPITLVIFFVIP 437
Query: 237 XXXXXVTALFFLPETKGKSVEEIEFELK 154
+ + +LPETK K + I +L+
Sbjct: 438 GILCIIMLILYLPETKDKHINVIVEQLR 465
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/105 (24%), Positives = 50/105 (47%)
Frame = -3
Query: 462 LPIVAIVATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPIT 283
LPI+ +V + ++AG PLP+V+ +E + R+ +S W+ + + + ++ ++
Sbjct: 470 LPIIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLTFLSLS 529
Query: 282 EILXXXXXXXXXXXXXXXXXVTALFFLPETKGKSVEEIEFELKAK 148
+ V FF+PETKG S++E+E K
Sbjct: 530 QAATKYGTFFIYCGCTMVALVFVFFFVPETKGYSIDEVEMLFMTK 574
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = -3
Query: 789 LEFFKQPVWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGITLNPELQLLSI--PAF 616
+ K P R+ +I ++ L+G+ T++ Y I+R++G+ N +S+ A
Sbjct: 271 IRILKTPHVRKAMIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKDNHTTIWISVGTSAI 330
Query: 615 MIISSALSIMLVERMGRKFLLAGTYI-VSAFSCGTLATTLLMQENGFAT 472
+ + + I LVER+GR+ LL + I V F + LL+ + T
Sbjct: 331 NFLGTFIPIALVERVGRRVLLLVSMIGVILFLIAMGVSFLLINNDSLRT 379
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 47.6 bits (108), Expect = 1e-05
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
Frame = -3
Query: 795 RFLEFFKQPVWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGI-TLNPELQLLSIPA 619
+ ++ ++ R I V+ +GV I +A IL+ +G+ L L +I
Sbjct: 255 KMMDIVRKKSLRDKAFIGVVVTFAMSFSGVAVINAFAFDILKDTGLKVLEASLANDAISV 314
Query: 618 FMIISSALSIMLVERMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFATP--GWLPIVAI 445
+ISS ++ ++V+R GR+ LL ++ C + L+ F G++ I I
Sbjct: 315 VSMISSIVAAVIVDRNGRRPLLLISF-AGILVCNLIIFALMFTFYKFENHVLGFILICFI 373
Query: 444 VATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXX 265
+A G PL + I +E+ R+ S L FV ++ P+ L
Sbjct: 374 CIFTFFFALGPGPLCYFINAELVGQAARSAAQSWASVIQMLSRFVIVTAFLPMKNQLGEA 433
Query: 264 XXXXXXXXXXXXXXVTALFF-LPETKGKSVEEIE 166
+ L+F LPETK K+ E+E
Sbjct: 434 WSYLILFVAPVAASLVYLYFSLPETKNKNPFEVE 467
>Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 500
Score = 47.2 bits (107), Expect = 1e-05
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 6/220 (2%)
Frame = -3
Query: 789 LEFFKQPVWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGITLNPE-LQLLSIPAFM 613
+ +K P RRG L+ ++ + ++G+ I +A IL G+ + + +I F
Sbjct: 281 ISVWKSPFNRRGTLLGMMVTFSMAMSGITVINAFAFEILMNVGMKQDTAAIANAAICFFS 340
Query: 612 IISSALSIMLVERMGRKFLLAGTY----IVSAFSCGTLATTLLMQENGFATPGWLPIVAI 445
+S +++ GR+ LL T+ +V+ G L T +N + + I AI
Sbjct: 341 FAGILVSTKIIDHFGRRPLLISTFGCLAVVNVVIVG-LMYTFAETQNQIVS--YFLISAI 397
Query: 444 VATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXX 265
+A G PL I E+ R+ ++ F+ Y P+ +
Sbjct: 398 CMFNFLFAMGPGPLSMFITGELVPQNCRSASSVWTNAVMAVVRFLILTFYLPVKNMTSEF 457
Query: 264 XXXXXXXXXXXXXXVTALFFL-PETKGKSVEEIEFELKAK 148
V +FFL PETKG++VEEI E + K
Sbjct: 458 MAYAIFFVVPMIVAVLVIFFLLPETKGRNVEEIREEYERK 497
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 45.6 bits (103), Expect = 4e-05
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 6/214 (2%)
Frame = -3
Query: 789 LEFFKQPVWRRGFLIMFVIITTHGLNGVFTIVTYASTILRASGIT-LNPELQLLSIPAFM 613
L+ +Q R + V+ +GV I +A IL +G+ L L +
Sbjct: 257 LDVIQQKSLRDKAFVGAVVTFVMSFSGVAVISAFAFEILVNTGLNVLQASLANDATTIVS 316
Query: 612 IISSALSIMLVERMGRKFL----LAGTYIVSAFSCGTLATTLLMQENGFATPGWLPIVAI 445
+ISS L+I ++++ GR+ L LAG I + G + T + G G++ I I
Sbjct: 317 VISSVLAIAIIDKNGRRPLLLISLAGILICNLIIFGLMFT---FDKFGNQVLGFILIFFI 373
Query: 444 VATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXX 265
+A G PL + I +E+ R+ S + F ++ P+ L
Sbjct: 374 CIFQFFFALGPGPLSYFINAELVGQDARSAAQSWASVVQMISQFSIITAFLPMKNQLGEA 433
Query: 264 XXXXXXXXXXXXXXVTALFF-LPETKGKSVEEIE 166
+ L+F LPETK KS E+E
Sbjct: 434 WSYLILFVAPVAVSLVFLYFSLPETKNKSPIEVE 467
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = -3
Query: 462 LPIVAIVATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPIT 283
LPIV + + ++ G LP+V+ SE + R+ +S + W+ + + A +Y +T
Sbjct: 474 LPIVMMGVYLLTFSCGFTSLPWVLNSEFYPMWARSTCVSISTLSNWVFNLIIALTYLSLT 533
Query: 282 EILXXXXXXXXXXXXXXXXXVTALFFLPETKGKSVEEIE 166
+ + F +PET G S++E+E
Sbjct: 534 HAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDEVE 572
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/103 (22%), Positives = 44/103 (42%)
Frame = -3
Query: 456 IVAIVATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEI 277
+VA++ Y G+ P+ + I SE+ + R+ S + +M + + P+ +
Sbjct: 370 LVALIIYGYTYGTGVGPISWFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSV 429
Query: 276 LXXXXXXXXXXXXXXXXXVTALFFLPETKGKSVEEIEFELKAK 148
+ + +LPETKG+ + +I ELK K
Sbjct: 430 IGSYAFLILYSIPSFISMLILFRYLPETKGREIHDIVNELKKK 472
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/103 (22%), Positives = 44/103 (42%)
Frame = -3
Query: 456 IVAIVATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEI 277
+VA++ Y G+ P+ + I SE+ + R+ S + +M + + P+ +
Sbjct: 370 LVALIIYGYTYGTGVGPISWFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSV 429
Query: 276 LXXXXXXXXXXXXXXXXXVTALFFLPETKGKSVEEIEFELKAK 148
+ + +LPETKG+ + +I ELK K
Sbjct: 430 IGSYAFLILYSIPSFISMLILFRYLPETKGREIHDIVNELKKK 472
>Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.6 protein.
Length = 479
Score = 35.5 bits (78), Expect = 0.044
Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 2/184 (1%)
Frame = -3
Query: 714 NGVFTIVTYASTILRASGITLNPELQLLSIPAFM-IISSALSIMLVERMGRKFLLAGTYI 538
+G+ I + + +L+ G + S+ +F I+S+ L+ + ++++GR+ LL + +
Sbjct: 292 SGIVAISFFGTFLLQTIGFSPEGSAVANSLCSFASIVSALLAAIAMDKIGRRPLLITSLL 351
Query: 537 VSAF-SCGTLATTLLMQENGFATPGWLPIVAIVATVSCYAAGILPLPFVIMSEMFNFQIR 361
V A + ++ L + W + V ++ GI P I +E+
Sbjct: 352 VLALINIFMMSLVFLYDSTKDSFLAWPFLALFVLFTFVFSIGIGPAAVFIGAELAPPGTI 411
Query: 360 AKVMSCIITTGWLMSFVQAASYGPITEILXXXXXXXXXXXXXXXXXVTALFFLPETKGKS 181
+K+ S + + SF+ Y + E + ++ LPETKGKS
Sbjct: 412 SKMQSYSTSVQFAGSFICPIIYLQLVESIGGFAFMLFIVPLTITAAYFYMY-LPETKGKS 470
Query: 180 VEEI 169
EI
Sbjct: 471 PVEI 474
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 35.1 bits (77), Expect = 0.059
Identities = 47/162 (29%), Positives = 66/162 (40%), Gaps = 6/162 (3%)
Frame = -3
Query: 633 LSIPAFMIISSALSIMLVERMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFATPGWLPI 454
+ IPA I+ +L++R+GR+ +LAG + A +C L LM +N W+ I
Sbjct: 406 VEIPALFIV-----YLLIDRIGRRLILAGGLFI-AGAC--LLVNWLMGDN---VQLWMAI 454
Query: 453 VAIVATVSCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGP--ITE 280
+ T G+ + E+F IR M T + + AASY I E
Sbjct: 455 TQMAFTKGS-ITGVYAAIYTYSPELFPTVIRNTAMGFCSTIARVGAI--AASYISMWIAE 511
Query: 279 ILXXXXXXXXXXXXXXXXXVTALFFLPETKGK----SVEEIE 166
V L FLPET GK S+EEIE
Sbjct: 512 QFGKVFMIIPFGCMAVLAAVMTLLFLPETMGKPLPESIEEIE 553
>U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical
protein K09C4.5 protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.24
Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 4/196 (2%)
Frame = -3
Query: 744 MFVIITTHGLNGVFTIVTYASTILRASGITLNPELQL-LSIPAFMIISSALSIMLVERMG 568
+F+++ + + GV+T++ + + +G T+ L + L + + + + +++ +G
Sbjct: 268 LFLVLDSGVIQGVYTVLLH-----KTAGFTVQEALNVNLVLVIIFLPTRFVGTYIIDHLG 322
Query: 567 RK--FLLAGTYIVSAFSCGTLATTLLMQENGFAT-PGWLPIVAIVATVSCYAAGILPLPF 397
R+ L+AG + S + L+T ++ G + WL I + S A G+ L
Sbjct: 323 RRPVMLIAGIIVYSK-TWLMLSTQFIIYFVGPSVLTKWLYIGVECLSESSLATGVTSLGI 381
Query: 396 VIMSEMFNFQIRAKVMSCIITTGWLMSFVQAASYGPITEILXXXXXXXXXXXXXXXXXVT 217
+ +SE+F R V +I ++ + S PI
Sbjct: 382 LFISELFPPSARTCVAQALILVTMTIN-LPIISIFPIVYSFFGPGFFIIHVFSQFFFGAY 440
Query: 216 ALFFLPETKGKSVEEI 169
+PET+G++V +I
Sbjct: 441 LYRHMPETRGRAVYDI 456
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/104 (24%), Positives = 47/104 (45%)
Frame = -3
Query: 612 IISSALSIMLVERMGRKFLLAGTYIVSAFSCGTLATTLLMQENGFATPGWLPIVAIVATV 433
+I S + L +R+GRK + G ++ + G + T M + W+ I A +A +
Sbjct: 127 LIGSFVCGFLSDRLGRKPVYLGCLLM--ITIGHILLTFSMYLS------WMTINATLAAM 178
Query: 432 SCYAAGILPLPFVIMSEMFNFQIRAKVMSCIITTGWLMSFVQAA 301
+ G + FVI++E F++ + + GW +S A
Sbjct: 179 GFFCGGYMVTNFVILTEA--FELPKSRLLVVSLNGWSVSMAVTA 220
>AL110487-4|CAB54427.1| 505|Caenorhabditis elegans Hypothetical
protein Y39E4B.5 protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.3
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Frame = -3
Query: 744 MFVIITTHGLNGVFTIVTYAST-ILRASGITLNPELQLLSIPAFMII--SSALSIMLVER 574
M + + T L F + +ST L SG++++ Q+ S A +++ SS +++R
Sbjct: 267 MRLALATLSLTLSFYPILQSSTYFLLESGVSVDMA-QICSTMAQVVLTLSSICGASIIDR 325
Query: 573 MGRKFLLAGTYIVS-----AFSCGT-LATTLLMQENGFATPGWLPIVAIVATVSCYAAGI 412
R+ LL I+S AFS + L+ T++ + ++ P + + +++A + +
Sbjct: 326 FSRRKLLITFGILSNVLLVAFSFFSHLSATVV---SPYSWPKYACLASLLAYCISFGMVL 382
Query: 411 LPLPFVIMSEMFNFQIRAKVMS-CIITTGWLMSFVQAASYGPITEILXXXXXXXXXXXXX 235
PL + + E+ + + R + S C L++ A+ P+ I
Sbjct: 383 GPLSWFVAPELVSQRHRCTIFSACFAIHNLLIALTDFATI-PLFRIFGSMCFVFLFVVPS 441
Query: 234 XXXXVTALFFLPETKGKSVEEIEFEL 157
F+PET GKS +I E+
Sbjct: 442 FFCLCYIYLFMPETLGKSTLDIIHEM 467
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 89 PFILDYHPPNIPKYSIEWSYFAFNSNSISSTLLPF 193
PFI +YHPP IP Y S+ SN+ + +PF
Sbjct: 228 PFISEYHPPFIPYYIPNQSF----SNAFNQYPMPF 258
>Z70308-11|CAA94343.4| 378|Caenorhabditis elegans Hypothetical
protein F49E11.2 protein.
Length = 378
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Frame = -3
Query: 636 LLSIPAFMIISSALSIMLVER-----MGRKF------LLAGTYIVSAFSCGTLATTLLMQ 490
LL P F I+S A SI L+ +GRK ++ + FS +A L
Sbjct: 40 LLMTPIFSIVSFAFSITLLAAIIYALLGRKIPSRKYCIIISRTLADIFSSVLIAAASLFA 99
Query: 489 ENGFATPGWLPIVAIVATVSCYAAGILPLPFVIMSEM-----FNFQIRAKV--MSCIITT 331
+ A+ L + + T + +I+ ++ + FQ + +S I+
Sbjct: 100 NSYSASYMVLALFLYICTFGVIQLTSSHIAVIILRQISVTRPYGFQSICSIRRLSLIVGF 159
Query: 330 GWLMSFVQAASYGPITEIL 274
W++S + +A+Y P+T ++
Sbjct: 160 TWILSIMYSAAYTPMTTVI 178
>U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical
protein B0252.3a protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = -3
Query: 768 VWRRGFLIMFVIITTHGL---NGVFTIVTYASTILRASGITLNPELQ-LLSIPAFMIISS 601
+W+ I++V++ T+ ++ + + ST L A + LN L L+ PA++
Sbjct: 94 MWKHKMFIVYVLVMTYIWIVDTFIYFGLAFYSTNL-AGNLYLNFVLMSLVEAPAYIF--- 149
Query: 600 ALSIMLVERMGRKFLLAGTYIVSAFS 523
S + + + GRK L++GT+I++ S
Sbjct: 150 --SPIFMNKYGRKVLISGTHIIAGLS 173
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = -3
Query: 768 VWRRGFLIMFVIITTHGL---NGVFTIVTYASTILRASGITLNPELQ-LLSIPAFMIISS 601
+W+ I++V++ T+ ++ + + ST L A + LN L L+ PA++
Sbjct: 261 MWKHKMFIVYVLVMTYIWIVDTFIYFGLAFYSTNL-AGNLYLNFVLMSLVEAPAYIF--- 316
Query: 600 ALSIMLVERMGRKFLLAGTYIVSAFS 523
S + + + GRK L++GT+I++ S
Sbjct: 317 --SPIFMNKYGRKVLISGTHIIAGLS 340
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = -3
Query: 768 VWRRGFLIMFVIITTHGL---NGVFTIVTYASTILRASGITLNPELQ-LLSIPAFMIISS 601
+W+ I++V++ T+ ++ + + ST L A + LN L L+ PA++
Sbjct: 281 MWKHKMFIVYVLVMTYIWIVDTFIYFGLAFYSTNL-AGNLYLNFVLMSLVEAPAYIF--- 336
Query: 600 ALSIMLVERMGRKFLLAGTYIVSAFS 523
S + + + GRK L++GT+I++ S
Sbjct: 337 --SPIFMNKYGRKVLISGTHIIAGLS 360
>AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical
protein Y54E5A.7 protein.
Length = 622
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 653 NVIPEARRIVEAYVTIVNTPFRP 721
N+ PEAR++VE ++V++P RP
Sbjct: 470 NIAPEARKVVEIATSMVSSPERP 492
>AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical
protein Y18D10A.6b protein.
Length = 655
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 563 FLPILSTSIMDRAEDIIIKAGILNNCSSGFNVIPEARRIVEAYVTIVNTPF 715
++ + S+++ A I++ A L + FN +P + I A+VT F
Sbjct: 239 YMLVFGESMLNDAVSIVLAATALRHAKPSFNSLPASEIITSAFVTFTEMFF 289
>AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical
protein Y18D10A.6a protein.
Length = 681
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 563 FLPILSTSIMDRAEDIIIKAGILNNCSSGFNVIPEARRIVEAYVTIVNTPF 715
++ + S+++ A I++ A L + FN +P + I A+VT F
Sbjct: 265 YMLVFGESMLNDAVSIVLAATALRHAKPSFNSLPASEIITSAFVTFTEMFF 315
>AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H
exchanger isoform 8b protein.
Length = 655
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 563 FLPILSTSIMDRAEDIIIKAGILNNCSSGFNVIPEARRIVEAYVTIVNTPF 715
++ + S+++ A I++ A L + FN +P + I A+VT F
Sbjct: 239 YMLVFGESMLNDAVSIVLAATALRHAKPSFNSLPASEIITSAFVTFTEMFF 289
>AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H
exchanger isoform 8a protein.
Length = 681
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 563 FLPILSTSIMDRAEDIIIKAGILNNCSSGFNVIPEARRIVEAYVTIVNTPF 715
++ + S+++ A I++ A L + FN +P + I A+VT F
Sbjct: 265 YMLVFGESMLNDAVSIVLAATALRHAKPSFNSLPASEIITSAFVTFTEMFF 315
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
protein F23D12.2 protein.
Length = 1322
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = -3
Query: 534 SAFSCGTLATTLLMQENGFAT-PGW----LPIVAIVATVS 430
SAFS T+ATT+L G T P W LP +I++T S
Sbjct: 45 SAFSSATVATTILCTSGGAPTLPAWKLNLLPDASILSTKS 84
>Z50859-1|CAA90726.1| 208|Caenorhabditis elegans Hypothetical
protein T26C5.1 protein.
Length = 208
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +2
Query: 524 ENADTIYVPARRNFLPILSTSIMDRAEDIIIKAG-------ILNNCSSGFNVIPE 667
E D + +PAR FLP+L+ + ++ G IL+N +S N PE
Sbjct: 121 EQKDKVLIPARDKFLPLLTRYLEKSKSGFLVDGGLTFADLIILDNMTSLLNWWPE 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,945,291
Number of Sequences: 27780
Number of extensions: 335936
Number of successful extensions: 972
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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