Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17c19
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC028363-1|AAH28363.1| 931|Homo sapiens phosphatidylinositol gl... 183 5e-46
AL137607-1|CAB70839.1| 825|Homo sapiens hypothetical protein pr... 183 5e-46
AF109219-1|AAD11432.1| 931|Homo sapiens Mcd4p homolog protein. 183 5e-46
BC096832-1|AAH96832.1| 346|Homo sapiens cysteinyl leukotriene r... 30 7.6
BC069160-1|AAH69160.1| 346|Homo sapiens cysteinyl leukotriene r... 30 7.6
BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein. 30 7.6
AY853711-1|AAW47925.1| 346|Homo sapiens cysteinyl leukotriene r... 30 7.6
AY389504-1|AAQ91330.1| 346|Homo sapiens cysteinyl leukotriene r... 30 7.6
AL137118-1|CAC29102.1| 346|Homo sapiens cysteinyl leukotriene r... 30 7.6
AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein. 30 7.6
AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein. 30 7.6
AF279611-1|AAK69485.1| 346|Homo sapiens cysteinyl leukotriene r... 30 7.6
AF254664-1|AAG17281.1| 346|Homo sapiens cysteinyl leukotriene r... 30 7.6
AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein. 30 7.6
AB083603-1|BAB89316.1| 346|Homo sapiens putative G-protein coup... 30 7.6
AB041947-1|BAD83598.1| 346|Homo sapiens G-protein coupled recep... 30 7.6
AB041644-1|BAB16379.1| 330|Homo sapiens cysteinyl leukotriene r... 30 7.6
AB038269-1|BAB03601.1| 346|Homo sapiens cysteinyl leukotriene C... 30 7.6
>BC028363-1|AAH28363.1| 931|Homo sapiens phosphatidylinositol glycan
anchor biosynthesis, class N protein.
Length = 931
Score = 183 bits (446), Expect = 5e-46
Identities = 99/237 (41%), Positives = 143/237 (60%), Gaps = 4/237 (1%)
Frame = -1
Query: 723 QTEAWIVAVTSLIMPFLFSRRLMCRLMAINTGLINFYLLMSVSHEGLFMVALIINVMSWV 544
Q +W +SL++P L S L RL +I L++ YLL+S +E LF + L + W+
Sbjct: 685 QIISWATLASSLVVPLLSSPVLFQRLFSILLSLMSTYLLLSTGYEALFPLVLSCLMFVWI 744
Query: 543 FIEFRLLHVKDV----KIIDCAFIEDTNEEKIGLQIERSITSQDFRRAFFFVLYIILAFF 376
IE L V K+ F +T+ + R + D RRAFF V +++ AFF
Sbjct: 745 NIEQETLQQSGVCCKQKLTSIQFSYNTDITQF-----RQLYLDDIRRAFFLVFFLVTAFF 799
Query: 375 GTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGC 196
GTGNIAS+NSF+L V CF+T F PF++ L++ K L PF++V CAF AVQ T+
Sbjct: 800 GTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLVMCAFEAVQLTTQLSSKS 859
Query: 195 LNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQIAKTMT 25
L +IVL+ S+IM L F V++ GSWL+IGTSIS +VIV +T+F+V +N +A+ +T
Sbjct: 860 LFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMSMTIFLVFLNGLAQLLT 916
>AL137607-1|CAB70839.1| 825|Homo sapiens hypothetical protein
protein.
Length = 825
Score = 183 bits (446), Expect = 5e-46
Identities = 99/237 (41%), Positives = 143/237 (60%), Gaps = 4/237 (1%)
Frame = -1
Query: 723 QTEAWIVAVTSLIMPFLFSRRLMCRLMAINTGLINFYLLMSVSHEGLFMVALIINVMSWV 544
Q +W +SL++P L S L RL +I L++ YLL+S +E LF + L + W+
Sbjct: 579 QIISWATLASSLVVPLLSSPVLFQRLFSILLSLMSTYLLLSTGYEALFPLVLSCLMFVWI 638
Query: 543 FIEFRLLHVKDV----KIIDCAFIEDTNEEKIGLQIERSITSQDFRRAFFFVLYIILAFF 376
IE L V K+ F +T+ + R + D RRAFF V +++ AFF
Sbjct: 639 NIEQETLQQSGVCCKQKLTSIQFSYNTDITQF-----RQLYLDDIRRAFFLVFFLVTAFF 693
Query: 375 GTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGC 196
GTGNIAS+NSF+L V CF+T F PF++ L++ K L PF++V CAF AVQ T+
Sbjct: 694 GTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLVMCAFEAVQLTTQLSSKS 753
Query: 195 LNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQIAKTMT 25
L +IVL+ S+IM L F V++ GSWL+IGTSIS +VIV +T+F+V +N +A+ +T
Sbjct: 754 LFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMSMTIFLVFLNGLAQLLT 810
>AF109219-1|AAD11432.1| 931|Homo sapiens Mcd4p homolog protein.
Length = 931
Score = 183 bits (446), Expect = 5e-46
Identities = 99/237 (41%), Positives = 143/237 (60%), Gaps = 4/237 (1%)
Frame = -1
Query: 723 QTEAWIVAVTSLIMPFLFSRRLMCRLMAINTGLINFYLLMSVSHEGLFMVALIINVMSWV 544
Q +W +SL++P L S L RL +I L++ YLL+S +E LF + L + W+
Sbjct: 685 QIISWATLASSLVVPLLSSPVLFQRLFSILLSLMSTYLLLSTGYEALFPLVLSCLMFVWI 744
Query: 543 FIEFRLLHVKDV----KIIDCAFIEDTNEEKIGLQIERSITSQDFRRAFFFVLYIILAFF 376
IE L V K+ F +T+ + R + D RRAFF V +++ AFF
Sbjct: 745 NIEQETLQQSGVCCKQKLTSIQFSYNTDITQF-----RQLYLDDIRRAFFLVFFLVTAFF 799
Query: 375 GTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGC 196
GTGNIAS+NSF+L V CF+T F PF++ L++ K L PF++V CAF AVQ T+
Sbjct: 800 GTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLVMCAFEAVQLTTQLSSKS 859
Query: 195 LNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQIAKTMT 25
L +IVL+ S+IM L F V++ GSWL+IGTSIS +VIV +T+F+V +N +A+ +T
Sbjct: 860 LFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMSMTIFLVFLNGLAQLLT 916
>BC096832-1|AAH96832.1| 346|Homo sapiens cysteinyl leukotriene
receptor 2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>BC069160-1|AAH69160.1| 346|Homo sapiens cysteinyl leukotriene
receptor 2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein.
Length = 412
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = -1
Query: 195 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 91
LN I ++ + +MGL L+F YV+ +G + EIGT I Q
Sbjct: 326 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 365
>AY853711-1|AAW47925.1| 346|Homo sapiens cysteinyl leukotriene
receptor 2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>AY389504-1|AAQ91330.1| 346|Homo sapiens cysteinyl leukotriene
receptor 2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>AL137118-1|CAC29102.1| 346|Homo sapiens cysteinyl leukotriene
receptor 2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein.
Length = 579
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = -1
Query: 195 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 91
LN I ++ + +MGL L+F YV+ +G + EIGT I Q
Sbjct: 497 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 536
>AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein.
Length = 583
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = -1
Query: 195 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 91
LN I ++ + +MGL L+F YV+ +G + EIGT I Q
Sbjct: 497 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 536
>AF279611-1|AAK69485.1| 346|Homo sapiens cysteinyl leukotriene
receptor type 2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>AF254664-1|AAG17281.1| 346|Homo sapiens cysteinyl leukotriene
receptor CYSLT2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein.
Length = 579
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = -1
Query: 195 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 91
LN I ++ + +MGL L+F YV+ +G + EIGT I Q
Sbjct: 497 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 536
>AB083603-1|BAB89316.1| 346|Homo sapiens putative G-protein coupled
receptor protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>AB041947-1|BAD83598.1| 346|Homo sapiens G-protein coupled receptor
protein protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
>AB041644-1|BAB16379.1| 330|Homo sapiens cysteinyl leukotriene
receptor like receptor protein.
Length = 330
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 13 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 47
>AB038269-1|BAB03601.1| 346|Homo sapiens cysteinyl leukotriene
CysLT2 receptor protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 444 RSITSQDFRRAFFFVLYIILAFFGT-GNIASLNSF 343
R+ T ++F+R FF ++Y+I+ F+G GN S+ F
Sbjct: 29 RNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVF 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,270,707
Number of Sequences: 237096
Number of extensions: 1934955
Number of successful extensions: 7209
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7206
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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