Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17c19
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011159-1|AAR82827.1| 917|Drosophila melanogaster AT21454p pro... 108 7e-24
AE013599-1004|AAF58853.2| 894|Drosophila melanogaster CG2292-PA... 108 7e-24
BT021452-1|AAX33600.1| 632|Drosophila melanogaster AT28040p pro... 71 2e-12
AE014297-4126|AAF56711.2| 898|Drosophila melanogaster CG13978-P... 69 5e-12
BT001286-1|AAN71042.1| 932|Drosophila melanogaster AT09001p pro... 68 1e-11
AY094627-1|AAM10980.1| 787|Drosophila melanogaster AT01413p pro... 68 1e-11
AE014297-3217|AAF56048.1| 919|Drosophila melanogaster CG4907-PA... 64 3e-10
AY060607-1|AAL28155.1| 858|Drosophila melanogaster GH02677p pro... 41 0.002
AE014297-1322|AAF54657.2| 897|Drosophila melanogaster CG6790-PA... 41 0.002
AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-P... 31 1.6
AY089358-1|AAL90096.1| 251|Drosophila melanogaster AT18451p pro... 30 2.9
AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-P... 30 2.9
AY061417-1|AAL28965.1| 487|Drosophila melanogaster LD34806p pro... 29 8.8
AE014134-2290|AAN10825.1| 487|Drosophila melanogaster CG31849-P... 29 8.8
>BT011159-1|AAR82827.1| 917|Drosophila melanogaster AT21454p protein.
Length = 917
Score = 108 bits (260), Expect = 7e-24
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Frame = -1
Query: 477 TNEEKIGLQIERSITSQD-FRRAFFFVLYIILAFFGTGNIASLNSFELRWVTCFITSFQP 301
T E I L+ + + + R AF +LY + FG+GNIAS++SF+ C+++ F P
Sbjct: 738 TIELNISLRAQSARAERSVLRLAFTLLLYTFFSLFGSGNIASISSFDPNIARCYLSHFAP 797
Query: 300 FLITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGS 121
F+I L+L+K L P +++ A + + I +L+ ++MGL LF VRN GS
Sbjct: 798 FVIMGLVLLKLLVPVVLIMSVIYANSEFVRQHEEQIFICLLLICDVMGLNFLFLVRNQGS 857
Query: 120 WLEIGTSISQFVIVQVITLFIVLINQIAKTM 28
WL+IGTSIS FVI++V TL +++I AK +
Sbjct: 858 WLDIGTSISHFVIMEVTTLVMLVIFYTAKQL 888
>AE013599-1004|AAF58853.2| 894|Drosophila melanogaster CG2292-PA
protein.
Length = 894
Score = 108 bits (260), Expect = 7e-24
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Frame = -1
Query: 477 TNEEKIGLQIERSITSQD-FRRAFFFVLYIILAFFGTGNIASLNSFELRWVTCFITSFQP 301
T E I L+ + + + R AF +LY + FG+GNIAS++SF+ C+++ F P
Sbjct: 715 TIELNISLRAQSARAERSVLRLAFTLLLYTFFSLFGSGNIASISSFDPNIARCYLSHFAP 774
Query: 300 FLITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGS 121
F+I L+L+K L P +++ A + + I +L+ ++MGL LF VRN GS
Sbjct: 775 FVIMGLVLLKLLVPVVLIMSVIYANSEFVRQHEEQIFICLLLICDVMGLNFLFLVRNQGS 834
Query: 120 WLEIGTSISQFVIVQVITLFIVLINQIAKTM 28
WL+IGTSIS FVI++V TL +++I AK +
Sbjct: 835 WLDIGTSISHFVIMEVTTLVMLVIFYTAKQL 865
>BT021452-1|AAX33600.1| 632|Drosophila melanogaster AT28040p
protein.
Length = 632
Score = 70.5 bits (165), Expect = 2e-12
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Frame = -1
Query: 570 LIINVMSW-VFIEFRLLHVKDVKIIDCAFIEDTNEEKIGLQIERSITSQDFRRAFFFVLY 394
++ N MS+ ++ LL + + + IED +E LQ + +R + +LY
Sbjct: 427 IVANSMSYMIWFYCLLLQLTRLSKKETKEIEDAKDEHTSLQNLKGF----YRYGYMILLY 482
Query: 393 IILAFFGTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRA-VQFV 217
++FF G+ S F+ F F ++ +L+L+K P +I CA A V FV
Sbjct: 483 FYVSFFLAGHWISSFLFKPTTARLFYAHFSLYIAGSLVLLKIFIPSMIFICALYAMVPFV 542
Query: 216 TKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQIA 37
K L I + + SN MGL +++RN GSW +I + Q ++ + ++L +A
Sbjct: 543 RKNARSIL-ISIFMISNAMGLYQYYFIRNRGSWRKIRMFLDQILLTHAVNFMLLLGICLA 601
Query: 36 K 34
K
Sbjct: 602 K 602
>AE014297-4126|AAF56711.2| 898|Drosophila melanogaster CG13978-PA
protein.
Length = 898
Score = 69.3 bits (162), Expect = 5e-12
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = -1
Query: 486 IEDTNEEKIGLQIERSITSQDFRRAFFFVLYIILAFFGTGNIASLNSFELRWVTCFITSF 307
IED +E LQ + +R + +LY ++FF G+ S F+ F F
Sbjct: 722 IEDAKDEHTSLQNLKGF----YRYGYMILLYFYVSFFLAGHWISSFLFKPTTARLFYPHF 777
Query: 306 QPFLITTLILMKTLSPFLIVGCAFRA-VQFVTKAPLGCLNIIVLIYSNIMGLQLLFYVRN 130
++ +L+L+K P +I CA A V FV K L I + + SN MGL +++RN
Sbjct: 778 SLYIAGSLVLLKIFIPSVIFICALYAMVPFVRKNARSIL-ISIFMISNAMGLYQYYFIRN 836
Query: 129 NGSWLEIGTSISQFVIVQVITLFIVLINQIAK 34
GSW +I + Q ++ + ++L +AK
Sbjct: 837 RGSWRKIRMFLDQILLTHAVNFMLLLGISLAK 868
>BT001286-1|AAN71042.1| 932|Drosophila melanogaster AT09001p protein.
Length = 932
Score = 68.1 bits (159), Expect = 1e-11
Identities = 52/243 (21%), Positives = 112/243 (46%), Gaps = 7/243 (2%)
Frame = -1
Query: 741 PVSAFYQTEAWIVAVTSLI-MPFLFSRRLMCRLMAINTGLINFYLLMSVSHEGLFMVALI 565
PV + W + + + +P+ ++ L RL I ++ +++++ S LF+ ++
Sbjct: 660 PVCTYVYAACWSYLLFAFLSIPYSGTKDLRRRLELIIFNMLTVHIMLTTSIGSLFVQIMV 719
Query: 564 IN-VMSWVFIE--FRLLHVKDV---KIIDCAFIEDTNEEKIGLQIERSITSQDFRRAFFF 403
V+ E F ++KD + + +E++ E +E Q +R A
Sbjct: 720 TEFVLGLELYEESFSYANLKDAIANQQQNNQGLEESRNESPNNPLEH--VRQSYRYAALI 777
Query: 402 VLYIILAFFGTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQ 223
+LY+ ++FFGTG+ +F+ F F ++ IL+K P +IV + A+
Sbjct: 778 LLYLYISFFGTGHWFFNFTFKPMTSRLFFPQFHLHMLVAFILLKIFIPSIIVMSSIYALV 837
Query: 222 FVTKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQ 43
+ + I + + ++ M L ++V N GSW ++ S+ + ++ V + +++ +
Sbjct: 838 SFGRKNARSIFICLFLMNDAMSLYFCYFVINRGSWEKVRESLDRLLVSHVFIILLLVCSW 897
Query: 42 IAK 34
IAK
Sbjct: 898 IAK 900
>AY094627-1|AAM10980.1| 787|Drosophila melanogaster AT01413p protein.
Length = 787
Score = 68.1 bits (159), Expect = 1e-11
Identities = 52/243 (21%), Positives = 112/243 (46%), Gaps = 7/243 (2%)
Frame = -1
Query: 741 PVSAFYQTEAWIVAVTSLI-MPFLFSRRLMCRLMAINTGLINFYLLMSVSHEGLFMVALI 565
PV + W + + + +P+ ++ L RL I ++ +++++ S LF+ ++
Sbjct: 515 PVCTYVYAACWSYLLFAFLSIPYSGTKDLRRRLELIIFNMLTVHIMLTTSIGSLFVQIMV 574
Query: 564 IN-VMSWVFIE--FRLLHVKDV---KIIDCAFIEDTNEEKIGLQIERSITSQDFRRAFFF 403
V+ E F ++KD + + +E++ E +E Q +R A
Sbjct: 575 TEFVLGLELYEESFSYANLKDAIANQQQNNQGLEESRNESPNNPLEH--VRQSYRYAALI 632
Query: 402 VLYIILAFFGTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQ 223
+LY+ ++FFGTG+ +F+ F F ++ IL+K P +IV + A+
Sbjct: 633 LLYLYISFFGTGHWFFNFTFKPMTSRLFFPQFHLHMLVAFILLKIFIPSIIVMSSIYALV 692
Query: 222 FVTKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQ 43
+ + I + + ++ M L ++V N GSW ++ S+ + ++ V + +++ +
Sbjct: 693 SFGRKNARSIFICLFLMNDAMSLYFCYFVINRGSWEKVRESLDRLLVSHVFIILLLVCSW 752
Query: 42 IAK 34
IAK
Sbjct: 753 IAK 755
>AE014297-3217|AAF56048.1| 919|Drosophila melanogaster CG4907-PA
protein.
Length = 919
Score = 63.7 bits (148), Expect = 3e-10
Identities = 51/243 (20%), Positives = 112/243 (46%), Gaps = 7/243 (2%)
Frame = -1
Query: 741 PVSAFYQTEAWIVAVTSLI-MPFLFSRRLMCRLMAINTGLINFYLLMSVSHEGLFMVALI 565
PV + W + + + +P+ ++ L RL I ++ +++++ S LF+ ++
Sbjct: 647 PVCTYVYAACWSYLLFAFLSIPYSGTKDLRRRLELIIFNMLTVHIMLTTSIGSLFVQIMV 706
Query: 564 IN-VMSWVFIE--FRLLHVKDV---KIIDCAFIEDTNEEKIGLQIERSITSQDFRRAFFF 403
V+ E F ++KD + + +E++ E +E Q +R A
Sbjct: 707 TEFVLGLELYEESFSYANLKDAIANQQQNNQGLEESRNESPNNPLEH--VRQSYRYAALI 764
Query: 402 VLYIILAFFGTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQ 223
+LY+ ++FFGTG+ +F+ F F ++ IL+K P +IV + A+
Sbjct: 765 LLYLYISFFGTGHWFFNFTFKPMTSRLFFPQFHLHMLVAFILLKIFIPSIIVMSSIYALV 824
Query: 222 FVTKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQ 43
+ + + I + + ++ M L ++V N GS ++ S+ + ++ V + +++ +
Sbjct: 825 SFGRKNVRSIFICLFLMNDAMSLYFCYFVINRGSLEKVRESLDRLLVSHVFIILLLVCSW 884
Query: 42 IAK 34
IAK
Sbjct: 885 IAK 887
>AY060607-1|AAL28155.1| 858|Drosophila melanogaster GH02677p protein.
Length = 858
Score = 40.7 bits (91), Expect = 0.002
Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 1/205 (0%)
Frame = -1
Query: 651 RLMAINTGLINFYLLMSVSHEGLFMVALIINVMSWVFIEFRLLHV-KDVKIIDCAFIEDT 475
RL I L+ ++L+S S+ LF LII + + + +DVKI+ T
Sbjct: 635 RLELIRFNLLTLHVLLSDSYVSLFAQGLIIEYQMGLEVHEKFKEADEDVKIL-------T 687
Query: 474 NEEKIGLQIERSITSQDFRRAFFFVLYIILAFFGTGNIASLNSFELRWVTCFITSFQPFL 295
+ + + + +R A +LY + FGTG+ ++ F+ L
Sbjct: 688 SSKHLQMC---------YRFAVSILLYFYASLFGTGHWVGGFTYLANSARLFLPDSSSGL 738
Query: 294 ITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGSWL 115
+ L+L+ L P +++ + A+ + + + +++ N + L + +V +N W
Sbjct: 739 VPLLVLIHLLIPSIVIMASVVALSSFGRQQIRTIFSSLMLICNAVVLFFVVFVPHNAYWP 798
Query: 114 EIGTSISQFVIVQVITLFIVLINQI 40
S+ ++ Q+ + I+ I
Sbjct: 799 MAHPSVVHALLAQLTVILILACESI 823
>AE014297-1322|AAF54657.2| 897|Drosophila melanogaster CG6790-PA
protein.
Length = 897
Score = 40.7 bits (91), Expect = 0.002
Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 1/205 (0%)
Frame = -1
Query: 651 RLMAINTGLINFYLLMSVSHEGLFMVALIINVMSWVFIEFRLLHV-KDVKIIDCAFIEDT 475
RL I L+ ++L+S S+ LF LII + + + +DVKI+ T
Sbjct: 674 RLELIRFNLLTLHVLLSDSYVSLFAQGLIIEYQMGLEVHEKFKEADEDVKIL-------T 726
Query: 474 NEEKIGLQIERSITSQDFRRAFFFVLYIILAFFGTGNIASLNSFELRWVTCFITSFQPFL 295
+ + + + +R A +LY + FGTG+ ++ F+ L
Sbjct: 727 SSKHLQMC---------YRFAVSILLYFYASLFGTGHWVGGFTYLANSARLFLPDSSSGL 777
Query: 294 ITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGCLNIIVLIYSNIMGLQLLFYVRNNGSWL 115
+ L+L+ L P +++ + A+ + + + +++ N + L + +V +N W
Sbjct: 778 VPLLVLIHLLIPSIVIMASVVALSSFGRQQIRTIFSSLMLICNAVVLFFVVFVPHNAYWP 837
Query: 114 EIGTSISQFVIVQVITLFIVLINQI 40
S+ ++ Q+ + I+ I
Sbjct: 838 MAHPSVVHALLAQLTVILILACESI 862
>AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-PA
protein.
Length = 1491
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/106 (22%), Positives = 44/106 (41%)
Frame = -1
Query: 363 IASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQFVTKAPLGCLNII 184
I SL F + F S + T L+ T PFLIVG +V T A +G + +
Sbjct: 107 IHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIVGAENSSVAAQTAASIGLNSAL 166
Query: 183 VLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLIN 46
I ++ +++ W I + S + ++ +++I+
Sbjct: 167 FYILDSVAVMEMQSV---GAQWYTIDNTASSGYKLSIVGYMLIMIS 209
>AY089358-1|AAL90096.1| 251|Drosophila melanogaster AT18451p
protein.
Length = 251
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 433 SNTPFDLKTNFFFICVFNKRAVNYLYVLHVKKSKFNKNPAH 555
S PFDL + +FIC N+ Y+L V K H
Sbjct: 9 SKLPFDLNSAAYFICKLQDEGNNHQYLLVVPKKPIGTPDGH 49
>AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-PB
protein.
Length = 1630
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 433 SNTPFDLKTNFFFICVFNKRAVNYLYVLHVKKSKFNKNPAH 555
S PFDL + +FIC N+ Y+L V K H
Sbjct: 1388 SKLPFDLNSAAYFICKLQDEGNNHQYLLVVPKKPIGTPDGH 1428
>AY061417-1|AAL28965.1| 487|Drosophila melanogaster LD34806p
protein.
Length = 487
Score = 28.7 bits (61), Expect = 8.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 85 NRTSYNLVHCANKSNCENHDGFQH 14
++TSY L+ C+++SNC + + H
Sbjct: 260 SQTSYTLLRCSSESNCTSSMAYSH 283
>AE014134-2290|AAN10825.1| 487|Drosophila melanogaster CG31849-PA
protein.
Length = 487
Score = 28.7 bits (61), Expect = 8.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 85 NRTSYNLVHCANKSNCENHDGFQH 14
++TSY L+ C+++SNC + + H
Sbjct: 260 SQTSYTLLRCSSESNCTSSMAYSH 283
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,166,923
Number of Sequences: 53049
Number of extensions: 616147
Number of successful extensions: 1620
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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