Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17c16
         (160 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           22   2.9  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       21   5.1  
AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450 pr...    21   6.8  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          20   9.0  

>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = +2

Query: 11  YCTKIKTFKRARISITHLVDNFFDRIIDDRNAEVDV 118
           YC +    +  ++ +TH  D    R+ D  +A +++
Sbjct: 141 YCCRESFLRERQLQLTHCYDPDGVRMTDHESATMEI 176


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 139 PMCITKQDVDFGISIINDAIKKVVN*VCNRN 47
           P CIT   V+ G+  +N  I      VC  +
Sbjct: 92  PACITADGVERGVMSLNRKIPGPTISVCRHD 122


>AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450
           protein.
          Length = 155

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -2

Query: 63  KCVIEILARLKVFIFVQYTI 4
           +C+ E++A+  +F+F+  T+
Sbjct: 120 RCMGELMAKSNLFLFLTTTL 139


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 92  DDRNAEVDVLFSD 130
           DDR+ E+D L SD
Sbjct: 609 DDRHRELDDLLSD 621


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,329
Number of Sequences: 2352
Number of extensions: 2479
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 32
effective length of database: 488,715
effective search space used:  9774300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)