Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17c15
         (794 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130390-1|AAI30391.1|  755|Homo sapiens FAM22F protein protein.       33   1.2  
AL691447-4|CAI13277.1|  655|Homo sapiens family with sequence si...    33   1.2  
AL158827-6|CAH72568.1|  622|Homo sapiens family with sequence si...    33   1.2  
AL133071-1|CAB61394.1|  613|Homo sapiens hypothetical protein pr...    33   1.2  

>BC130390-1|AAI30391.1|  755|Homo sapiens FAM22F protein protein.
          Length = 755

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = -1

Query: 794 GCTRR*GSRRRHCTISAQFFPSQFSRWTPWGRSWPNE*RRV-----PPSASAQFPAGAGR 630
           GC R   +  RH T      PS+F+      R  P+  +RV     PP  +AQ P G GR
Sbjct: 508 GCGR---AAPRHGTARLDSSPSEFAAGQEAAREVPDPQQRVSVETSPPQTAAQDPQGQGR 564

Query: 629 TKSGSA 612
            ++G A
Sbjct: 565 VRTGMA 570


>AL691447-4|CAI13277.1|  655|Homo sapiens family with sequence
           similarity 22, member F protein.
          Length = 655

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = -1

Query: 794 GCTRR*GSRRRHCTISAQFFPSQFSRWTPWGRSWPNE*RRV-----PPSASAQFPAGAGR 630
           GC R   +  RH T      PS+F+      R  P+  +RV     PP  +AQ P G GR
Sbjct: 407 GCGR---AAPRHGTARLDSSPSEFAAGQEAAREVPDPQQRVSVETSPPQTAAQDPQGQGR 463

Query: 629 TKSGSA 612
            ++G A
Sbjct: 464 VRTGMA 469


>AL158827-6|CAH72568.1|  622|Homo sapiens family with sequence
           similarity 22, member G protein.
          Length = 622

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = -1

Query: 794 GCTRR*GSRRRHCTISAQFFPSQFSRWTPWGRSWPNE*RRV-----PPSASAQFPAGAGR 630
           GC R   +  RH T      PS+F+      R  P+  +RV     PP  +AQ P G GR
Sbjct: 374 GCGR---AAPRHGTARLDSSPSEFAAGQEAAREVPDPQQRVSVETSPPQTAAQDPQGQGR 430

Query: 629 TKSGSA 612
            ++G A
Sbjct: 431 VRTGMA 436


>AL133071-1|CAB61394.1|  613|Homo sapiens hypothetical protein
           protein.
          Length = 613

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = -1

Query: 794 GCTRR*GSRRRHCTISAQFFPSQFSRWTPWGRSWPNE*RRV-----PPSASAQFPAGAGR 630
           GC R   +  RH T      PS+F+      R  P+  +RV     PP  +AQ P G GR
Sbjct: 366 GCGR---AAPRHGTARLDSSPSEFAAGQEAAREVPDPQQRVSVETSPPQTAAQDPQGQGR 422

Query: 629 TKSGSA 612
            ++G A
Sbjct: 423 VRTGMA 428


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,257,353
Number of Sequences: 237096
Number of extensions: 2578154
Number of successful extensions: 8698
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8698
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)