Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17c13
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 208 3e-54
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 200 1e-51
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 200 1e-51
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 194 5e-50
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 182 4e-46
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 180 8e-46
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 180 8e-46
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 180 8e-46
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 180 8e-46
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 169 2e-42
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 169 2e-42
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 167 6e-42
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 167 6e-42
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 157 9e-39
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 136 2e-32
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 136 2e-32
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 33 0.24
U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical pr... 32 0.43
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 29 5.3
AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical ... 29 5.3
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 208 bits (509), Expect = 3e-54
Identities = 101/246 (41%), Positives = 136/246 (55%), Gaps = 9/246 (3%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVESD---DIKGIDWYFMPVVNPDGYEYTHTVDRLW 641
G+HAREWI+PA + I + E + +++ DWY MP VNPDGYEY+ T DRLW
Sbjct: 205 GVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIMPQVNPDGYEYSRTTDRLW 264
Query: 640 RKNRKPGY---RACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEPETLALSEFIK 470
RK R R C G D NRN+G+ WG GA+ +PCS IY GS+ +SEPE L EF
Sbjct: 265 RKTRSKNVTVNRWCVGADANRNWGYRWGEAGANRTPCSNIYMGSHPYSEPEIRGLKEFFT 324
Query: 469 SSAANFSAYVTYHSYGQYMLYPWGYDNAVPPDYKDLDNLGKKMAEAISKTXXXXXXXXXX 290
N Y++ HSYGQ +L PWGY N +Y+D N K+ A+AI T
Sbjct: 325 WQITNPMVYISLHSYGQLLLSPWGYTNERTENYQDQQNAAKEAAQAIKNTTGVSYSYGTI 384
Query: 289 XGLLYPAAGGSDDWAKSQGIKYSYTIELSDT---GRYGFVLPTSFIVPVAKENLAGLRVL 119
++YPA+G S D+ + +G+ Y Y +EL T + F LP S+I E LA L +
Sbjct: 385 SEMMYPASGTSIDFMQHRGVPYIYGVELRPTDNPNSFAFNLPPSYIRATGDEMLAALNAI 444
Query: 118 ASQVIK 101
+ +K
Sbjct: 445 GTHAVK 450
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 200 bits (487), Expect = 1e-51
Identities = 106/238 (44%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVESDDIKGIDWYFMPVVNPDGYEYTHTVDRLWRKN 632
GIHAREWIS Y IY + + + +P NPDGYEY+ T DR+WRK
Sbjct: 174 GIHAREWISYNVALYLIYTIVSQ-PAYRNLLDSVQLVVVPNTNPDGYEYSRTNDRMWRKT 232
Query: 631 RKPGYRA-CTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEPETLALSEFIKSSAAN 455
R + C G D NRN+ +WG +G S+S CSEI+ GS SEPE LAL+ I
Sbjct: 233 RSRFTNSRCAGADANRNYPFYWGTQGVSHSQCSEIFCGSRPQSEPEVLALTNAIIRDEER 292
Query: 454 FSAYVTYHSYGQYMLYPWGY-DNAVPPDYKDLDNLGKKMAEAISKTXXXXXXXXXXXGLL 278
Y+ HSYGQ +LYPWG+ P D +DL +G+ MA AI L
Sbjct: 293 IKGYIALHSYGQEILYPWGHTQRTYPTDVQDLIQVGRAMASAIRAVNNTDYTVVNSGDGL 352
Query: 277 YPAAGGSDDWAKSQGIKYSYTIELSDTGRY-GFVLPTSFIVPVAKENLAGLRVLASQV 107
YPAAG SDDWAKS+GIKYSYTIELS + GF LP I V +E ++VL +V
Sbjct: 353 YPAAGASDDWAKSRGIKYSYTIELSPIDDFTGFSLPEDRINQVCREAFQAIQVLMIEV 410
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 200 bits (487), Expect = 1e-51
Identities = 106/238 (44%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVESDDIKGIDWYFMPVVNPDGYEYTHTVDRLWRKN 632
GIHAREWIS Y IY + + + +P NPDGYEY+ T DR+WRK
Sbjct: 174 GIHAREWISYNVALYLIYTIVSQ-PAYRNLLDSVQLVVVPNTNPDGYEYSRTNDRMWRKT 232
Query: 631 RKPGYRA-CTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEPETLALSEFIKSSAAN 455
R + C G D NRN+ +WG +G S+S CSEI+ GS SEPE LAL+ I
Sbjct: 233 RSRFTNSRCAGADANRNYPFYWGTQGVSHSQCSEIFCGSRPQSEPEVLALTNAIIRDEER 292
Query: 454 FSAYVTYHSYGQYMLYPWGY-DNAVPPDYKDLDNLGKKMAEAISKTXXXXXXXXXXXGLL 278
Y+ HSYGQ +LYPWG+ P D +DL +G+ MA AI L
Sbjct: 293 IKGYIALHSYGQEILYPWGHTQRTYPTDVQDLIQVGRAMASAIRAVNNTDYTVVNSGDGL 352
Query: 277 YPAAGGSDDWAKSQGIKYSYTIELSDTGRY-GFVLPTSFIVPVAKENLAGLRVLASQV 107
YPAAG SDDWAKS+GIKYSYTIELS + GF LP I V +E ++VL +V
Sbjct: 353 YPAAGASDDWAKSRGIKYSYTIELSPIDDFTGFSLPEDRINQVCREAFQAIQVLMIEV 410
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 194 bits (474), Expect = 5e-50
Identities = 103/263 (39%), Positives = 151/263 (57%), Gaps = 25/263 (9%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQFAEYFDVE---SDDIKGIDWYFMPVVNPDGYEYTHTVD-- 650
GGIHAREW+SP+TV YFI+Q +D + + ++WY +P++NPDGYEY+ + +
Sbjct: 181 GGIHAREWVSPSTVLYFIHQLVTQYDKDVQIKQFVDQLEWYIVPLLNPDGYEYSRSSNDP 240
Query: 649 --RLWRKNRKPGY--------------RACTGTDLNRNFGHHWGGKGASNSPCSEIYRGS 518
RLWRKNR P C G DLNRNF +G G+S PCSEIY+G+
Sbjct: 241 EIRLWRKNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFDWFFGQVGSSTDPCSEIYQGA 300
Query: 517 NAFSEPETLALSEFIKSSAANFSAYVTYHSYGQYMLYPWGYD-NAVPPDYKDLDNLGKKM 341
AFSEPET A+ +F++ S ++T+HSY Q ++YP+G+ D DL +
Sbjct: 301 YAFSEPETAAVRDFVQRH--RISTFLTFHSYSQILMYPFGHQVRTYSNDLNDLRSTALSA 358
Query: 340 AEAISKTXXXXXXXXXXXGLLYPAAGGSDDWAKSQG-IKYSYTIELSDTGRY--GFVLPT 170
A+A++ LYPA+GGS+DWAK + +KYS+ EL + GF+L
Sbjct: 359 AQALNSVYNTQYKVGTGADTLYPASGGSEDWAKGKAHVKYSFLFELRPEEQVWDGFLLAE 418
Query: 169 SFIVPVAKENLAGLRVLASQVIK 101
+ I+P A+E ++V+AS+ I+
Sbjct: 419 NQIIPTARETWEAVKVIASKTIE 441
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 182 bits (442), Expect = 4e-46
Identities = 102/259 (39%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQFAEYFDVES---DDIKGIDWYFMPVVNPDGYEYTHTVD-- 650
G IHAREW S T YFI Q + ++ + + +D+Y +P +NPDGYEYT T
Sbjct: 216 GNIHAREWASSHTALYFINQLVSEYGKDAQITNYVDTLDFYIVPCLNPDGYEYTRTSPIP 275
Query: 649 --RLWRKNRKP---------GYRACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSE 503
RLWRKNR P G + C G DLNRNF HW +G+S PCS IY G FSE
Sbjct: 276 TVRLWRKNRSPELCRPSLWGGEKCCRGVDLNRNFRFHWAERGSSYEPCSNIYHGEEVFSE 335
Query: 502 PETLALSEFIKSSAA--NFSAYVTYHSYGQYMLYPWGYDNA-VPPDYKDLDNLGKKMAEA 332
PET A+ F+ + A+VT HSY Q +YP+ ++ P D +L +K
Sbjct: 336 PETRAVRNFLATPEMKDRVDAFVTLHSYAQLWIYPYSHEEQNYPEDIGELRKTARKAINR 395
Query: 331 ISKTXXXXXXXXXXXGLLYPAAGGSDDWAKSQ-GIKYSYTIELSDTGRY--GFVLPTSFI 161
+S+ L PAAGGSDDWAKS +KY Y IEL GF+L +
Sbjct: 396 LSRVYGTNYRMGTGADTLSPAAGGSDDWAKSALNVKYVYLIELRPQMELSNGFILHKKEL 455
Query: 160 VPVAKENLAGLRVLASQVI 104
+P A E G R + V+
Sbjct: 456 IPTAVETFEGFREVVDAVL 474
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 180 bits (439), Expect = 8e-46
Identities = 97/255 (38%), Positives = 143/255 (56%), Gaps = 17/255 (6%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVESDDIK---GIDWYFMPVVNPDGYEYTHTVDRLW 641
GIHAREWI+PAT Y ++ ++ ++ K ID+Y +PV+NPDGYEY+ +R+W
Sbjct: 186 GIHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYSREKNRMW 245
Query: 640 RKNRKPGYRA--------CTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEPETLAL 485
RKNR P A C+G DLNRNF W G+S+ PC + Y GS AFSEPE+ A+
Sbjct: 246 RKNRSPAKCARQTFSTVCCSGVDLNRNFDWFWASTGSSSDPCHDTYHGSAAFSEPESQAV 305
Query: 484 SEFIKSSAANFSAYVTYHSYGQYMLYPWGY-DNAVPPDY-KDLDNLGKKMAEAISKTXXX 311
+F++ + A+++ HSY Q L P+G+ + P DY L L + +A+ +
Sbjct: 306 RDFLEQNTP--EAFISLHSYSQMWLIPYGHRKQSYPQDYHTGLRPLALRATKALYELYGT 363
Query: 310 XXXXXXXXGLLYPAAGGSDDWAKSQ-GIKYSYTIELSDTGR---YGFVLPTSFIVPVAKE 143
L+Y A+GGS DWAK Q + Y+Y IEL +GF+LP IVP E
Sbjct: 364 KYQVGTGADLMYEASGGSHDWAKGQLKVPYAYLIELRPKNTMMGHGFLLPEREIVPTGLE 423
Query: 142 NLAGLRVLASQVIKE 98
++V+A +++ +
Sbjct: 424 TFESIKVVADELVAQ 438
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 180 bits (439), Expect = 8e-46
Identities = 97/255 (38%), Positives = 143/255 (56%), Gaps = 17/255 (6%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVESDDIK---GIDWYFMPVVNPDGYEYTHTVDRLW 641
GIHAREWI+PAT Y ++ ++ ++ K ID+Y +PV+NPDGYEY+ +R+W
Sbjct: 186 GIHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYSREKNRMW 245
Query: 640 RKNRKPGYRA--------CTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEPETLAL 485
RKNR P A C+G DLNRNF W G+S+ PC + Y GS AFSEPE+ A+
Sbjct: 246 RKNRSPAKCARQTFSTVCCSGVDLNRNFDWFWASTGSSSDPCHDTYHGSAAFSEPESQAV 305
Query: 484 SEFIKSSAANFSAYVTYHSYGQYMLYPWGY-DNAVPPDY-KDLDNLGKKMAEAISKTXXX 311
+F++ + A+++ HSY Q L P+G+ + P DY L L + +A+ +
Sbjct: 306 RDFLEQNTP--EAFISLHSYSQMWLIPYGHRKQSYPQDYHTGLRPLALRATKALYELYGT 363
Query: 310 XXXXXXXXGLLYPAAGGSDDWAKSQ-GIKYSYTIELSDTGR---YGFVLPTSFIVPVAKE 143
L+Y A+GGS DWAK Q + Y+Y IEL +GF+LP IVP E
Sbjct: 364 KYQVGTGADLMYEASGGSHDWAKGQLKVPYAYLIELRPKNTMMGHGFLLPEREIVPTGLE 423
Query: 142 NLAGLRVLASQVIKE 98
++V+A +++ +
Sbjct: 424 TFESIKVVADELVAQ 438
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 180 bits (439), Expect = 8e-46
Identities = 100/258 (38%), Positives = 142/258 (55%), Gaps = 21/258 (8%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQFAEYFDVESDD--IKGIDWYFMPVVNPDGYEYTHTVD--- 650
GGIHAREW +P T +FI+Q + + I + +P +NPDGYE+T +
Sbjct: 182 GGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYEFTRSSTNPH 241
Query: 649 -RLWRKNRKPGY---------RACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEP 500
RLWRKNR R C G DLNRNF H+ G S+ PCSEIY+G + FSEP
Sbjct: 242 VRLWRKNRSKMQCRKDIWGRNRCCRGVDLNRNFDFHFRESGTSDDPCSEIYQGPSPFSEP 301
Query: 499 ETLALSEFIKSS--AANFSAYVTYHSYGQYMLYPWGY-DNAVPPDYKDLDNLGKKMAEAI 329
E A+ + + S AY+T H+Y Q ++P+G+ +A P D KDL +GKK A+A+
Sbjct: 302 EAKAVRDALLSQRYKGRTDAYITLHTYSQIWIHPYGHKKDAYPGDIKDLYEVGKKAAQAL 361
Query: 328 SKTXXXXXXXXXXXGLLYPAAGGSDDWAKSQG-IKYSYTIEL--SDTGRYGFVLPTSFIV 158
+ LYPA+GGS+DWAK + +K+ Y +EL + GF+L ++
Sbjct: 362 KRVYGTKYVVGSGADTLYPASGGSEDWAKHEAKVKFVYLLELRPDEKNWDGFILDEKELI 421
Query: 157 PVAKENLAGLRVLASQVI 104
P A+E G+RV+A V+
Sbjct: 422 PTARETWEGVRVVAEAVL 439
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 180 bits (439), Expect = 8e-46
Identities = 100/258 (38%), Positives = 142/258 (55%), Gaps = 21/258 (8%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQFAEYFDVESDD--IKGIDWYFMPVVNPDGYEYTHTVD--- 650
GGIHAREW +P T +FI+Q + + I + +P +NPDGYE+T +
Sbjct: 182 GGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYEFTRSSTNPH 241
Query: 649 -RLWRKNRKPGY---------RACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEP 500
RLWRKNR R C G DLNRNF H+ G S+ PCSEIY+G + FSEP
Sbjct: 242 VRLWRKNRSKMQCRKDIWGRNRCCRGVDLNRNFDFHFRESGTSDDPCSEIYQGPSPFSEP 301
Query: 499 ETLALSEFIKSS--AANFSAYVTYHSYGQYMLYPWGY-DNAVPPDYKDLDNLGKKMAEAI 329
E A+ + + S AY+T H+Y Q ++P+G+ +A P D KDL +GKK A+A+
Sbjct: 302 EAKAVRDALLSQRYKGRTDAYITLHTYSQIWIHPYGHKKDAYPGDIKDLYEVGKKAAQAL 361
Query: 328 SKTXXXXXXXXXXXGLLYPAAGGSDDWAKSQG-IKYSYTIEL--SDTGRYGFVLPTSFIV 158
+ LYPA+GGS+DWAK + +K+ Y +EL + GF+L ++
Sbjct: 362 KRVYGTKYVVGSGADTLYPASGGSEDWAKHEAKVKFVYLLELRPDEKNWDGFILDEKELI 421
Query: 157 PVAKENLAGLRVLASQVI 104
P A+E G+RV+A V+
Sbjct: 422 PTARETWEGVRVVAEAVL 439
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 169 bits (411), Expect = 2e-42
Identities = 100/258 (38%), Positives = 136/258 (52%), Gaps = 20/258 (7%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVE---SDDIKGIDWYFMPVVNPDGYEYTHTVD--- 650
GIHAREW + T +YFI + + + + I Y +PV+NPDGYEYT T
Sbjct: 151 GIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYTRTDKTNP 210
Query: 649 --RLWRKNRKP------GYR--ACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEP 500
R+WRK+R P G R C G DLNRNF + GAS PCSEIY G +AFSEP
Sbjct: 211 RARMWRKSRSPKACAFDGVRNSCCMGVDLNRNFDFRFSEIGASRYPCSEIYHGPSAFSEP 270
Query: 499 ETLALSEFIKSSAANFSAYVTYHSYGQYMLYPWGYDN-AVPPDYKDLDNLGKKMAEAISK 323
E+ A S+F+ S AY+T HSY Q +Y + + PD ++ + K + + +
Sbjct: 271 ESKAYSQFLTSLKGRLEAYITLHSYSQLWIYSYSHRKFTYAPDIEETRRVAAKAVQELGR 330
Query: 322 TXXXXXXXXXXXGLLYPAAGGSDDWAK-SQGIKYSYTIELSDTGR--YGFVLPTSFIVPV 152
++Y +GGS DWAK + IKYSYTIEL GFVL + ++P
Sbjct: 331 MYGTKYRHGTGPEIIYAFSGGSTDWAKETLKIKYSYTIELRPGYEEWNGFVLDKNQLIPT 390
Query: 151 AKENLAGLRVLASQVIKE 98
AKE AG+ V+ +V +
Sbjct: 391 AKETWAGVTVVLDEVTNQ 408
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 169 bits (411), Expect = 2e-42
Identities = 100/258 (38%), Positives = 136/258 (52%), Gaps = 20/258 (7%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVE---SDDIKGIDWYFMPVVNPDGYEYTHTVD--- 650
GIHAREW + T +YFI + + + + I Y +PV+NPDGYEYT T
Sbjct: 151 GIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYTRTDKTNP 210
Query: 649 --RLWRKNRKP------GYR--ACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEP 500
R+WRK+R P G R C G DLNRNF + GAS PCSEIY G +AFSEP
Sbjct: 211 RARMWRKSRSPKACAFDGVRNSCCMGVDLNRNFDFRFSEIGASRYPCSEIYHGPSAFSEP 270
Query: 499 ETLALSEFIKSSAANFSAYVTYHSYGQYMLYPWGYDN-AVPPDYKDLDNLGKKMAEAISK 323
E+ A S+F+ S AY+T HSY Q +Y + + PD ++ + K + + +
Sbjct: 271 ESKAYSQFLTSLKGRLEAYITLHSYSQLWIYSYSHRKFTYAPDIEETRRVAAKAVQELGR 330
Query: 322 TXXXXXXXXXXXGLLYPAAGGSDDWAK-SQGIKYSYTIELSDTGR--YGFVLPTSFIVPV 152
++Y +GGS DWAK + IKYSYTIEL GFVL + ++P
Sbjct: 331 MYGTKYRHGTGPEIIYAFSGGSTDWAKETLKIKYSYTIELRPGYEEWNGFVLDKNQLIPT 390
Query: 151 AKENLAGLRVLASQVIKE 98
AKE AG+ V+ +V +
Sbjct: 391 AKETWAGVTVVLDEVTNQ 408
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical protein
ZC434.9b protein.
Length = 532
Score = 167 bits (407), Expect = 6e-42
Identities = 102/269 (37%), Positives = 150/269 (55%), Gaps = 30/269 (11%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQF-AEYFD--VESDDIKGIDWYFMPVVNPDGYEYTHT---- 656
GGIHAREW + T +FI + A+Y D + + +++Y +PV NPDGYEY+ +
Sbjct: 197 GGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYSRSDVSP 256
Query: 655 VDRLWRKNR------KPGY---RACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSE 503
+ RLWRKNR K + R C G DLNRN+ H+G G+S CSEIY+GS+AFSE
Sbjct: 257 MIRLWRKNRAGVVCKKDRWFRDRCCGGVDLNRNYDWHFGETGSSTDKCSEIYQGSSAFSE 316
Query: 502 PETLALSEFIKSSAAN--FSAYVTYHSYGQYMLYPWGY-DNAVPPDYKDL--------DN 356
ET ++ +F+ SS N A++T H+Y Q ++P+ + +VP D +L
Sbjct: 317 SETRSMRDFLTSSELNGKIDAFITLHTYSQMWIHPYSHARKSVPADVAELVCVDENNVQR 376
Query: 355 LGKKMAEAISKTXXXXXXXXXXXGLLYPAAGGSDDWAK-SQGIKYSYTIEL--SDTGRYG 185
+G+ A+ T +LYP+AGGSDDWAK + IKY Y +EL + G
Sbjct: 377 VGRAAVAALENTYGTKYKFGTGSDILYPSAGGSDDWAKGTLRIKYVYLLELRPGEDVWDG 436
Query: 184 FVLPTSFIVPVAKENLAGLRVLASQVIKE 98
F+L ++P AKE G++V+ V ++
Sbjct: 437 FILDQHQLIPTAKETWNGIKVVIRAVTEQ 465
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical protein
ZC434.9a protein.
Length = 581
Score = 167 bits (407), Expect = 6e-42
Identities = 102/269 (37%), Positives = 150/269 (55%), Gaps = 30/269 (11%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQF-AEYFD--VESDDIKGIDWYFMPVVNPDGYEYTHT---- 656
GGIHAREW + T +FI + A+Y D + + +++Y +PV NPDGYEY+ +
Sbjct: 197 GGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYSRSDVSP 256
Query: 655 VDRLWRKNR------KPGY---RACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSE 503
+ RLWRKNR K + R C G DLNRN+ H+G G+S CSEIY+GS+AFSE
Sbjct: 257 MIRLWRKNRAGVVCKKDRWFRDRCCGGVDLNRNYDWHFGETGSSTDKCSEIYQGSSAFSE 316
Query: 502 PETLALSEFIKSSAAN--FSAYVTYHSYGQYMLYPWGY-DNAVPPDYKDL--------DN 356
ET ++ +F+ SS N A++T H+Y Q ++P+ + +VP D +L
Sbjct: 317 SETRSMRDFLTSSELNGKIDAFITLHTYSQMWIHPYSHARKSVPADVAELVCVDENNVQR 376
Query: 355 LGKKMAEAISKTXXXXXXXXXXXGLLYPAAGGSDDWAK-SQGIKYSYTIEL--SDTGRYG 185
+G+ A+ T +LYP+AGGSDDWAK + IKY Y +EL + G
Sbjct: 377 VGRAAVAALENTYGTKYKFGTGSDILYPSAGGSDDWAKGTLRIKYVYLLELRPGEDVWDG 436
Query: 184 FVLPTSFIVPVAKENLAGLRVLASQVIKE 98
F+L ++P AKE G++V+ V ++
Sbjct: 437 FILDQHQLIPTAKETWNGIKVVIRAVTEQ 465
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 157 bits (381), Expect = 9e-39
Identities = 98/258 (37%), Positives = 133/258 (51%), Gaps = 20/258 (7%)
Frame = -2
Query: 811 GIHAREWISPATVTYFIYQFAEYFDVE---SDDIKGIDWYFMPVVNPDGYEYTHTVD--- 650
GIHAREW + T +YFI + + + + I Y +PV+NPDGYEYT T
Sbjct: 151 GIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYTRTDKTNP 210
Query: 649 --RLWRKNRKP------GYR--ACTGTDLNRNFGHHWGGKGASNSPCSEIYRGSNAFSEP 500
R+WRK+R P G R C G DLNRNF + GAS PCSEIY G +AFSEP
Sbjct: 211 RARMWRKSRSPKACAFDGVRNSCCMGVDLNRNFDFRFSEIGASRYPCSEIYHGPSAFSEP 270
Query: 499 ETLALSEFIKSSAANFSAYVTYHSYGQYMLYPWGYDN-AVPPDYKDLDNLGKKMAEAISK 323
E+ A S+F+ S AY+T HSY Q +Y + + PD ++ + K + + +
Sbjct: 271 ESKAYSQFLTSLKGRLEAYITLHSYSQLWIYSYSHRKFTYAPDIEETRRVAAKAVQELGR 330
Query: 322 TXXXXXXXXXXXGLLYPAAGGSDDWAK-SQGIKYSYTIELSDTGR--YGFVLPTSFIVPV 152
++ GS DWAK + IKYSYTIEL GFVL + ++P
Sbjct: 331 MYGTKYRHGTGPEIIC----GSTDWAKETLKIKYSYTIELRPGYEEWNGFVLDKNQLIPT 386
Query: 151 AKENLAGLRVLASQVIKE 98
AKE AG+ V+ +V +
Sbjct: 387 AKETWAGVTVVLDEVTNQ 404
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 136 bits (329), Expect = 2e-32
Identities = 87/263 (33%), Positives = 129/263 (49%), Gaps = 24/263 (9%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQFAEYF---DVESDDIKGIDWYFMPVVNPDGYEYTHTVDRL 644
GG HAREW + YFI + + D + ++ +D Y PV+NPDG+ Y+ T R
Sbjct: 92 GGNHAREWPAFHVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRTSTRA 151
Query: 643 ----WRKNRKPGYRA----------CTGTDLNRNFGHHWGGKGAS-NSPCSEIYRGSNAF 509
WRKNR P C G DLNRN+ + K N+PCS+ ++G F
Sbjct: 152 MIRQWRKNRAPENCTGTGPFQTDICCEGVDLNRNYDIGFSHKNYPFNNPCSDEFQGPRPF 211
Query: 508 SEPETLALSEFIKSSA--ANFSAYVTYHSYGQYMLYPWGYD-NAVPPDYKDLDNLGKKMA 338
SEPET A+ +FI SS A V+ H++GQ + P+ Y P D KDL+ L + A
Sbjct: 212 SEPETRAVRDFIMSSEIYGRLYALVSMHTHGQLWILPYNYQKRTYPQDIKDLEILANRAA 271
Query: 337 EAISKTXXXXXXXXXXXGLLYPAAGGSDDW-AKSQGIKYSYTIELSDTGR--YGFVLPTS 167
+ + +L A GG+ DW K+ KY Y +EL + + F +
Sbjct: 272 DRVFAYRETKYRVGTAADMLGTATGGATDWIKKNTPTKYVYVLELPPDMKTWFAFQVKPH 331
Query: 166 FIVPVAKENLAGLRVLASQVIKE 98
+++P+ KE G+ V+ QV++E
Sbjct: 332 WLIPIGKETWLGIEVIFDQVVEE 354
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 136 bits (329), Expect = 2e-32
Identities = 87/263 (33%), Positives = 129/263 (49%), Gaps = 24/263 (9%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQFAEYF---DVESDDIKGIDWYFMPVVNPDGYEYTHTVDRL 644
GG HAREW + YFI + + D + ++ +D Y PV+NPDG+ Y+ T R
Sbjct: 92 GGNHAREWPAFHVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRTSTRA 151
Query: 643 ----WRKNRKPGYRA----------CTGTDLNRNFGHHWGGKGAS-NSPCSEIYRGSNAF 509
WRKNR P C G DLNRN+ + K N+PCS+ ++G F
Sbjct: 152 MIRQWRKNRAPENCTGTGPFQTDICCEGVDLNRNYDIGFSHKNYPFNNPCSDEFQGPRPF 211
Query: 508 SEPETLALSEFIKSSA--ANFSAYVTYHSYGQYMLYPWGYD-NAVPPDYKDLDNLGKKMA 338
SEPET A+ +FI SS A V+ H++GQ + P+ Y P D KDL+ L + A
Sbjct: 212 SEPETRAVRDFIMSSEIYGRLYALVSMHTHGQLWILPYNYQKRTYPQDIKDLEILANRAA 271
Query: 337 EAISKTXXXXXXXXXXXGLLYPAAGGSDDW-AKSQGIKYSYTIELSDTGR--YGFVLPTS 167
+ + +L A GG+ DW K+ KY Y +EL + + F +
Sbjct: 272 DRVFAYRETKYRVGTAADMLGTATGGATDWIKKNTPTKYVYVLELPPDMKTWFAFQVKPH 331
Query: 166 FIVPVAKENLAGLRVLASQVIKE 98
+++P+ KE G+ V+ QV++E
Sbjct: 332 WLIPIGKETWLGIEVIFDQVVEE 354
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 703 YFMPVVNPDGYEYTHTVDRLWRKNRKPGYRACTGTDLNRNF 581
+ MP +NPDGYE+ D+ G + G DLNRNF
Sbjct: 156 HLMPSMNPDGYEHASEGDQA----GVTGRQNANGKDLNRNF 192
>U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical
protein C46A5.2 protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 575 MSKVSVEISTSASTVTRLSVLPPKTIHGMCILVSIWIHDRHEIPVDALNIVRFHIEILSK 754
++K+S+ + S + VLP ++ V I I+ R+ + + N VRF+ + S
Sbjct: 283 VAKLSIFFNNMTSPILNTGVLPQLVLYNGDSNVEIGIYPRYYLNSNDWNRVRFYQK--SM 340
Query: 755 LVDKVSDGCGTYP 793
++ SDGC T P
Sbjct: 341 ILLPKSDGCSTDP 353
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 31.1 bits (67), Expect = 0.99
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = -2
Query: 814 GGIHAREWISPATVTYFIYQFAEYFDVE---SDDIKGIDWYFMPVVNPDGYEYTHTVDRL 644
G +H E + V Y + +D + + MP +NPDGYE DR+
Sbjct: 136 GNMHGNEVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMPSMNPDGYEKGFPGDRI 195
Query: 643 WRKNRKPGYRACTGTDLNRNF 581
G DLNRNF
Sbjct: 196 ----SAMGRANANDVDLNRNF 212
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 703 YFMPVVNPDGYEY---THTVDRLWRKNRKPGYRACTGTDLNRNF 581
+ +P +NPDG+E T R W R G DLNR+F
Sbjct: 139 HILPSMNPDGFELALGTEPAQRQWLTGRS----NINGVDLNRDF 178
>AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical
protein C30E1.8 protein.
Length = 424
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 509 KGITSTIYFTARTV*CAFASPMMSKVSVEISTSASTV--TRLSVLPPKTIHGMCILVSIW 682
K T+T+ T +T P ++ V +T+ ST+ T S + K I L +IW
Sbjct: 276 KPTTTTVTTTTKTT-TTQQQPQTTQSVVIQTTATSTIQTTTKSTVNVKLIVSTVTLNTIW 334
Query: 683 IHDRH 697
++DRH
Sbjct: 335 LYDRH 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,176,296
Number of Sequences: 27780
Number of extensions: 417663
Number of successful extensions: 1091
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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