Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17c10
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding pr...    25   3.7  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   8.6  

>AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP20 protein.
          Length = 139

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = -3

Query: 767 CSKRRKIFLMRDLQKL*QG--IRAIC 696
           C+K++KIF +R  Q +  G  IR++C
Sbjct: 11  CTKKKKIFPLRKEQMMKSGEMIRSVC 36


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 442 SLQWINTFSHVTNRFYKPTLQE 507
           ++ W+   +HVT+R Y PT+ +
Sbjct: 721 NIDWLQKINHVTSRQY-PTIND 741


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,425
Number of Sequences: 2352
Number of extensions: 9909
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)