Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17c09
         (830 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR541770-1|CAG46569.1|  399|Homo sapiens TM7SF1 protein.               31   5.1  
BC012100-1|AAH12100.1|  399|Homo sapiens G protein-coupled recep...    31   5.1  
AY242135-1|AAO92302.1|  399|Homo sapiens similar to transmembran...    31   5.1  
AL139162-6|CAI23528.1|  399|Homo sapiens G protein-coupled recep...    31   5.1  
AL139162-1|CAI23523.1|  229|Homo sapiens G protein-coupled recep...    31   5.1  
AL122018-5|CAI22684.1|  399|Homo sapiens G protein-coupled recep...    31   5.1  
AK223632-1|BAD97352.1|  399|Homo sapiens transmembrane 7 superfa...    31   5.1  
AF027826-1|AAC39669.1|  399|Homo sapiens putative seven pass tra...    31   5.1  

>CR541770-1|CAG46569.1|  399|Homo sapiens TM7SF1 protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 192 SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 236


>BC012100-1|AAH12100.1|  399|Homo sapiens G protein-coupled receptor
           137B protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 192 SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 236


>AY242135-1|AAO92302.1|  399|Homo sapiens similar to transmembrane 7
           superfamily member 1 protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 192 SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 236


>AL139162-6|CAI23528.1|  399|Homo sapiens G protein-coupled receptor
           137B protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 192 SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 236


>AL139162-1|CAI23523.1|  229|Homo sapiens G protein-coupled receptor
           137B protein.
          Length = 229

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 55  SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 99


>AL122018-5|CAI22684.1|  399|Homo sapiens G protein-coupled receptor
           137B protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 192 SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 236


>AK223632-1|BAD97352.1|  399|Homo sapiens transmembrane 7
           superfamily member 1 (upregulated in kidney) variant
           protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 192 SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 236


>AF027826-1|AAC39669.1|  399|Homo sapiens putative seven pass
           transmembrane protein protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 534 SVYINITKTLFTCCKVSLQFSLLAIYEQSTLHLNLHDRLQNICHM 400
           SV + I  TLF  C VSL   L  I + S  ++ L  +  ++C +
Sbjct: 192 SVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQV 236


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,352,331
Number of Sequences: 237096
Number of extensions: 1832864
Number of successful extensions: 6979
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6978
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)