Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17c08
(900 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071013-1|AAL48635.1| 361|Drosophila melanogaster RE09223p pro... 359 2e-99
AE014297-3198|AAF56032.1| 361|Drosophila melanogaster CG6949-PA... 359 2e-99
BT010296-1|AAQ23614.1| 813|Drosophila melanogaster LD11580p pro... 36 0.057
AE013599-2990|AAF57487.1| 813|Drosophila melanogaster CG9143-PA... 36 0.057
BT001263-1|AAN71019.1| 469|Drosophila melanogaster AT02760p pro... 31 2.2
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro... 29 8.7
AY094875-1|AAM11228.1| 381|Drosophila melanogaster RE41410p pro... 29 8.7
AY089467-1|AAL90205.1| 597|Drosophila melanogaster AT27838p pro... 29 8.7
AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protei... 29 8.7
AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein. 29 8.7
AE014297-577|AAF54049.2| 597|Drosophila melanogaster CG14609-PA... 29 8.7
AE014296-2049|AAF50001.1| 381|Drosophila melanogaster CG7264-PA... 29 8.7
AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-P... 29 8.7
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P... 29 8.7
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P... 29 8.7
>AY071013-1|AAL48635.1| 361|Drosophila melanogaster RE09223p
protein.
Length = 361
Score = 359 bits (884), Expect = 2e-99
Identities = 159/244 (65%), Positives = 198/244 (81%)
Frame = -2
Query: 815 FLKIDLPDFNEDHTSYPPHKLRQKMKEKGVLPPRPWMERPFYISATGGVFEAYVPPEGDG 636
F+K+DLP+ E ++R +MKE+GVLPPRPWMERPF+IS TGG+FEAYVPPEGDG
Sbjct: 67 FVKMDLPNLREKQEDITKEEMRSRMKERGVLPPRPWMERPFHISCTGGIFEAYVPPEGDG 126
Query: 635 KASIVSTSRAKQTVELLEKKSKSMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNN 456
K SI+STS AKQ +E LEKKSKS+MA+RKI+S+DE++ S F + AQDIYI+AH +
Sbjct: 127 KKSIISTSGAKQKLEFLEKKSKSLMAVRKIRSYDENFSSDDFGAEAQDIYIQAHTHMAAK 186
Query: 455 DKRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVR 276
DK +R +V+E+ Y E HN KTIRWKFL+SLEPPRVVHAR T+VI+KEN F QVTVR
Sbjct: 187 DKYKIREFVSERCYPEMMHNVKDKTIRWKFLQSLEPPRVVHARVTEVITKENQFAQVTVR 246
Query: 275 FHTRQQLAVYDRFGRLIHGSEILAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEP 96
FH++Q LA+YDRFGRL+HGSEI+ KDVLEY+VFEKH+SN YG WR+H+KIIPDW P K+P
Sbjct: 247 FHSQQMLAIYDRFGRLMHGSEIITKDVLEYVVFEKHISNEYGKWRLHDKIIPDWLPAKQP 306
Query: 95 SKLT 84
+ +T
Sbjct: 307 APIT 310
>AE014297-3198|AAF56032.1| 361|Drosophila melanogaster CG6949-PA
protein.
Length = 361
Score = 359 bits (884), Expect = 2e-99
Identities = 159/244 (65%), Positives = 198/244 (81%)
Frame = -2
Query: 815 FLKIDLPDFNEDHTSYPPHKLRQKMKEKGVLPPRPWMERPFYISATGGVFEAYVPPEGDG 636
F+K+DLP+ E ++R +MKE+GVLPPRPWMERPF+IS TGG+FEAYVPPEGDG
Sbjct: 67 FVKMDLPNLREKQEDITKEEMRSRMKERGVLPPRPWMERPFHISCTGGIFEAYVPPEGDG 126
Query: 635 KASIVSTSRAKQTVELLEKKSKSMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNN 456
K SI+STS AKQ +E LEKKSKS+MA+RKI+S+DE++ S F + AQDIYI+AH +
Sbjct: 127 KKSIISTSGAKQKLEFLEKKSKSLMAVRKIRSYDENFSSDDFGAEAQDIYIQAHTHMAAK 186
Query: 455 DKRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVR 276
DK +R +V+E+ Y E HN KTIRWKFL+SLEPPRVVHAR T+VI+KEN F QVTVR
Sbjct: 187 DKYKIREFVSERCYPEMMHNVKDKTIRWKFLQSLEPPRVVHARVTEVITKENQFAQVTVR 246
Query: 275 FHTRQQLAVYDRFGRLIHGSEILAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEP 96
FH++Q LA+YDRFGRL+HGSEI+ KDVLEY+VFEKH+SN YG WR+H+KIIPDW P K+P
Sbjct: 247 FHSQQMLAIYDRFGRLMHGSEIITKDVLEYVVFEKHISNEYGKWRLHDKIIPDWLPAKQP 306
Query: 95 SKLT 84
+ +T
Sbjct: 307 APIT 310
>BT010296-1|AAQ23614.1| 813|Drosophila melanogaster LD11580p
protein.
Length = 813
Score = 36.3 bits (80), Expect = 0.057
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEKGVLPPRPWME---RPFYISATGGVFEAYVPPE--GDGKASI 624
N+ T+ PP L+ KE + W + + IS GG FE + E D AS+
Sbjct: 4 NKQKTAKPPKLLKGAAKEPALSKAENWQKVKIKGHVISDDGGGFEGLIGLEVLKDYDASL 63
Query: 623 VSTSRAKQTVELLEKKSKSMMAIRKIKSFDEDYDSK 516
V +S+ + T +++ K RK+ DE+ S+
Sbjct: 64 VKSSQKRTTSRNPDRERKLKKKKRKVSKGDEEESSE 99
>AE013599-2990|AAF57487.1| 813|Drosophila melanogaster CG9143-PA
protein.
Length = 813
Score = 36.3 bits (80), Expect = 0.057
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEKGVLPPRPWME---RPFYISATGGVFEAYVPPE--GDGKASI 624
N+ T+ PP L+ KE + W + + IS GG FE + E D AS+
Sbjct: 4 NKQKTAKPPKLLKGAAKEPALSKAENWQKVKIKGHVISDDGGGFEGLIGLEVLKDYDASL 63
Query: 623 VSTSRAKQTVELLEKKSKSMMAIRKIKSFDEDYDSK 516
V +S+ + T +++ K RK+ DE+ S+
Sbjct: 64 VKSSQKRTTSRNPDRERKLKKKKRKVSKGDEEESSE 99
>BT001263-1|AAN71019.1| 469|Drosophila melanogaster AT02760p
protein.
Length = 469
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -2
Query: 554 RKIKSFDEDYDSKKFISHAQDIYIKAHESLVNNDKRALRLYVTEKAYSEFRHNSHLKTIR 375
R+ S ++D DS + + +D Y + E L + D + + + + R+N H K
Sbjct: 394 RRSNSDEDDEDSDRLENEDEDFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASL 453
Query: 374 WKFLESLEPPRVVHARCT 321
W P H +C+
Sbjct: 454 WAL------PSTFHRKCS 465
>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
protein.
Length = 1019
Score = 29.1 bits (62), Expect = 8.7
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +1
Query: 196 TSLARISLPWIRRPK-RSYTASCWRVWNRTVTCPNMFSLLITSVHRACTTLGGSNDSRN- 369
T + R ++P + R + R Y SCWR W R P ++ R T N+ RN
Sbjct: 12 TPMTRENIPLLNRQRNRWYLFSCWRKWFR----PRELRARTVNLGRVNTEKFPPNEIRNQ 67
Query: 370 -FHLIVFK*LLCLNSE*AFSVTYNLNALLSLF 462
++ I F L+ F Y L LS F
Sbjct: 68 KYNFITFLPLVLFEQFRFFLNLYFLLMALSQF 99
>AY094875-1|AAM11228.1| 381|Drosophila melanogaster RE41410p
protein.
Length = 381
Score = 29.1 bits (62), Expect = 8.7
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = -2
Query: 593 ELLEKKSKSMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNNDKRALRL-YVTEKA 417
++LEKK + + K F+E +K + AQ++ ++ + +V++D R Y ++
Sbjct: 51 QILEKKKQRTAQMECDKKFEEQEQLQKRLILAQEMELEKKQRVVDSDLNYYRCRYQRKEQ 110
Query: 416 YSEFRHNSHLKTIRWKFLESLEPPRVVHARCTDVISKENIF 294
EF N FL+ P RV + +S IF
Sbjct: 111 RREFDLNDP------NFLKKARPTRVADNDISLGVSSAQIF 145
>AY089467-1|AAL90205.1| 597|Drosophila melanogaster AT27838p
protein.
Length = 597
Score = 29.1 bits (62), Expect = 8.7
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = -2
Query: 671 VFEAYVPPEGDGKASIVSTSRAKQTVELLE--KKSKSMMAIR-KIKSFDEDYDSKKFI-- 507
+ A P G A+ A T L ++++SMM ++ ++K+ ++ KF+
Sbjct: 294 MLSALKKPAGTSIANFNKPKEAAPTTNLKRYVRETQSMMILKLELKAVEKTIKEVKFVTL 353
Query: 506 -SHAQDIYIKAHESLVNNDK 450
S A++IY + + NNDK
Sbjct: 354 CSQAKEIYPRMKSQVDNNDK 373
>AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protein
short isoform protein.
Length = 1629
Score = 29.1 bits (62), Expect = 8.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +1
Query: 190 SRTSLARISLPWIRRPKRSYTASCWRVWNRTVTCPNMFSLLITSVHRACT----TLGGSN 357
+R SL R S P + P S S R+W V C I SV C +L S
Sbjct: 1210 NRASLLRSSAPTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPSVAVRCASPDLSLSSSP 1269
Query: 358 DSRN 369
DS N
Sbjct: 1270 DSLN 1273
>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
Length = 3479
Score = 29.1 bits (62), Expect = 8.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +1
Query: 190 SRTSLARISLPWIRRPKRSYTASCWRVWNRTVTCPNMFSLLITSVHRACT----TLGGSN 357
+R SL R S P + P S S R+W V C I SV C +L S
Sbjct: 1210 NRASLLRSSAPTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPSVAVRCASPDLSLSSSP 1269
Query: 358 DSRN 369
DS N
Sbjct: 1270 DSLN 1273
>AE014297-577|AAF54049.2| 597|Drosophila melanogaster CG14609-PA
protein.
Length = 597
Score = 29.1 bits (62), Expect = 8.7
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = -2
Query: 671 VFEAYVPPEGDGKASIVSTSRAKQTVELLE--KKSKSMMAIR-KIKSFDEDYDSKKFI-- 507
+ A P G A+ A T L ++++SMM ++ ++K+ ++ KF+
Sbjct: 294 MLSALKKPAGTSIANFNKPKEAAPTTNLKRYVRETQSMMILKLELKAVEKTIKEVKFVTL 353
Query: 506 -SHAQDIYIKAHESLVNNDK 450
S A++IY + + NNDK
Sbjct: 354 CSQAKEIYPRMKSQVDNNDK 373
>AE014296-2049|AAF50001.1| 381|Drosophila melanogaster CG7264-PA
protein.
Length = 381
Score = 29.1 bits (62), Expect = 8.7
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = -2
Query: 593 ELLEKKSKSMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNNDKRALRL-YVTEKA 417
++LEKK + + K F+E +K + AQ++ ++ + +V++D R Y ++
Sbjct: 51 QILEKKKQRTAQMECDKKFEEQEQLQKRLILAQEMELEKKQRVVDSDLNYYRCRYQRKEQ 110
Query: 416 YSEFRHNSHLKTIRWKFLESLEPPRVVHARCTDVISKENIF 294
EF N FL+ P RV + +S IF
Sbjct: 111 RREFDLNDP------NFLKKARPTRVADNDISLGVSSAQIF 145
>AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-PD,
isoform D protein.
Length = 1629
Score = 29.1 bits (62), Expect = 8.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +1
Query: 190 SRTSLARISLPWIRRPKRSYTASCWRVWNRTVTCPNMFSLLITSVHRACT----TLGGSN 357
+R SL R S P + P S S R+W V C I SV C +L S
Sbjct: 1210 NRASLLRSSAPTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPSVAVRCASPDLSLSSSP 1269
Query: 358 DSRN 369
DS N
Sbjct: 1270 DSLN 1273
>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
isoform B protein.
Length = 3479
Score = 29.1 bits (62), Expect = 8.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +1
Query: 190 SRTSLARISLPWIRRPKRSYTASCWRVWNRTVTCPNMFSLLITSVHRACT----TLGGSN 357
+R SL R S P + P S S R+W V C I SV C +L S
Sbjct: 1210 NRASLLRSSAPTKKVPTESQKDSYLRLWRNQVACAMRLVPQIPSVAVRCASPDLSLSSSP 1269
Query: 358 DSRN 369
DS N
Sbjct: 1270 DSLN 1273
>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
isoform A protein.
Length = 1087
Score = 29.1 bits (62), Expect = 8.7
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +1
Query: 196 TSLARISLPWIRRPK-RSYTASCWRVWNRTVTCPNMFSLLITSVHRACTTLGGSNDSRN- 369
T + R ++P + R + R Y SCWR W R P ++ R T N+ RN
Sbjct: 12 TPMTRENIPLLNRQRNRWYLFSCWRKWFR----PRELRARTVNLGRVNTEKFPPNEIRNQ 67
Query: 370 -FHLIVFK*LLCLNSE*AFSVTYNLNALLSLF 462
++ I F L+ F Y L LS F
Sbjct: 68 KYNFITFLPLVLFEQFRFFLNLYFLLMALSQF 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,634,767
Number of Sequences: 53049
Number of extensions: 828045
Number of successful extensions: 2215
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2215
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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