Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17c08
(900 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 5.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 5.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 5.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 5.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 5.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 5.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.6
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.6
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 8.8
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -2
Query: 452 KRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVV 336
+R + Y E+ Y E+R S ++ K E + P+++
Sbjct: 44 EREQKSYKNEREYREYRETSRERSRDRKERERSKEPKII 82
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -2
Query: 452 KRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVV 336
+R + Y E+ Y E+R S ++ K E + P+++
Sbjct: 44 EREQKSYKNEREYREYRETSRERSRDRKERERSKEPKII 82
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -2
Query: 452 KRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVV 336
+R + Y E+ Y E+R S ++ K E + P+++
Sbjct: 44 EREQKSYKNEREYREYRETSRERSRDRKERERSKEPKII 82
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -2
Query: 452 KRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVV 336
+R + Y E+ Y E+R S ++ K E + P+++
Sbjct: 44 EREQKSYKNEREYREYRETSRERSRDRKERERSKEPKII 82
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 5.0
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 324 SREHRIIPSHYIEQIPAPVYYGNFPPRPIMVRPW 357
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 5.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 248 TRPAAGACGTGPS 286
T PAA A GTGP+
Sbjct: 227 TLPAASATGTGPA 239
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +3
Query: 381 CLQVTVVSKLRISFLCYI*SQCSLIVIHQAFVSFYV 488
CL+V V K R+ + + + +++ ++VSF++
Sbjct: 233 CLEVVFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 268
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 76 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 76 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 76 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 76 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 76 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 76 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 76 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 325 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 325 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 325 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 325 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 325 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 325 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 309 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 342
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 788 NEDHTSYPPHKLRQKMKEK--GVLPPRPWMERPF 693
+ +H P H + Q G PPRP M RP+
Sbjct: 325 SREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +3
Query: 138 HSPSAVQVGEVLLEDYVLQDVF 203
++PS++++GEV + D V ++
Sbjct: 417 YTPSSLELGEVAVHDPVFYQLY 438
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,508
Number of Sequences: 438
Number of extensions: 4904
Number of successful extensions: 36
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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