Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17c04
         (818 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    28   0.40 
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         28   0.40 
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   6.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.6  

>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 294 IGLLTHEFLLDVLSDLSIVEEVAVFSDFPVDEENPLGKLLLRVQGFGQG 440
           IG  +H FL    S     ++  +  D+PV   N  G+ +L VQ +  G
Sbjct: 250 IGGHSHSFLFPNASSKPHNQQDTILGDYPVVVSNANGRKILIVQAYAYG 298


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 294 IGLLTHEFLLDVLSDLSIVEEVAVFSDFPVDEENPLGKLLLRVQGFGQG 440
           IG  +H FL    S     ++  +  D+PV   N  G+ +L VQ +  G
Sbjct: 250 IGGHSHSFLFPNASSKPHNQQDTILGDYPVVVSNANGRKILIVQAYAYG 298


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -1

Query: 224 LSLAVYLFDEYLQKVV*TKF*NPIQFYHLVVFFFKQATLNF*VQIWLFNC 75
           LSL + L   YLQ           QF H   ++   A LN    +W  NC
Sbjct: 213 LSLVIILSQYYLQP--------DFQFCHTFAYYHIIAMLNGFCSLWFVNC 254


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 632  NNYQTNREGFAKLFRKLSDDSWE 564
            NN+QT  +    LFR  + ++W+
Sbjct: 1346 NNFQTFPQAVLVLFRSATGEAWQ 1368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,985
Number of Sequences: 2352
Number of extensions: 14363
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)