Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17b23
(794 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119247-1|AAM51107.1| 444|Drosophila melanogaster SD20854p pro... 180 3e-45
AL109630-6|CAB51692.1| 444|Drosophila melanogaster EG:BACR7A4.2... 180 3e-45
AE014298-126|AAF45566.1| 444|Drosophila melanogaster CG3706-PA ... 180 3e-45
BT021239-1|AAX33387.1| 584|Drosophila melanogaster RE71902p pro... 32 1.0
AY058760-1|AAL13989.1| 335|Drosophila melanogaster SD02824p pro... 32 1.0
AJ224361-1|CAA11918.1| 561|Drosophila melanogaster receptor tyr... 32 1.0
AF123572-1|AAD31179.1| 565|Drosophila melanogaster Doughnut pre... 32 1.0
AE014134-3068|AAF53783.2| 584|Drosophila melanogaster CG17559-P... 32 1.0
AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer pr... 31 1.4
AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA... 31 1.4
AY051492-1|AAK92916.1| 627|Drosophila melanogaster GH14707p pro... 30 4.2
AE014134-2349|AAF53301.1| 627|Drosophila melanogaster CG10859-P... 30 4.2
BT029259-1|ABK30896.1| 812|Drosophila melanogaster FI01119p pro... 29 5.5
BT021363-1|AAX33511.1| 712|Drosophila melanogaster LP11437p pro... 29 5.5
AY094965-1|AAM11318.1| 812|Drosophila melanogaster SD07008p pro... 29 5.5
AE014134-3153|ABC65908.1| 776|Drosophila melanogaster CG10462-P... 29 5.5
AE014134-3152|ABC65907.1| 776|Drosophila melanogaster CG10462-P... 29 5.5
AE014134-3151|AAF53838.2| 812|Drosophila melanogaster CG10462-P... 29 5.5
AE013599-3419|AAF46866.2| 775|Drosophila melanogaster CG33143-P... 29 5.5
AY094932-1|AAM11285.1| 173|Drosophila melanogaster RH50933p pro... 29 7.3
AE013599-409|AAF59257.3| 173|Drosophila melanogaster CG30503-PA... 29 7.3
>AY119247-1|AAM51107.1| 444|Drosophila melanogaster SD20854p
protein.
Length = 444
Score = 180 bits (437), Expect = 3e-45
Identities = 85/257 (33%), Positives = 149/257 (57%), Gaps = 7/257 (2%)
Frame = -1
Query: 755 MKKWNISYKGQMWYQNNPSKFVDVDFTGEW-TATTKYFDFDTDLYPATVIRSIAKEKWSR 579
M+ W + Y G + Q + V VD + +++ ++FD++ DL A + SIA+E W+
Sbjct: 165 MRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHFDYNRDLSSALIADSIAREAWNE 224
Query: 578 EYFELLKTAH-----QSHYEQFGNLKCKFKIGEESFEYTLPSFRDHSFGHKRDWTLMYRY 414
+++ LL++ + ++HYEQ G L + + + + FRDHSFG +R + + RY
Sbjct: 225 KFYSLLRSVNHIVEKRTHYEQNGELAGQVTLDGKELALKMVGFRDHSFGTERCLSSINRY 284
Query: 413 AFHHIFLEDGTSISVGVICQPST-ASVFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAP 237
+ +F++DG+S+ VG + QPS S + G++ P ++ P+ + +LY +GE G P
Sbjct: 285 VYFALFMDDGSSMVVGSLSQPSFFLSSLKVGYVCSPERQYQPLTGSNFELYSYGEKGTPP 344
Query: 236 KDYAFQFKAGDEEYTVQVLVEYESIHYVSDEWDARMVERFCKFTVNNIPGRGVSEFHYRH 57
+ F + + EY VQ+ VE ++ YV +W++++ +F TVN +PG+G +EF YRH
Sbjct: 345 QHQNFIVRTEEREYLVQIQVEASALRYVGGDWESKVFNQFVACTVNGVPGQGHAEFLYRH 404
Query: 56 TDGRPESVAKNDPEWYR 6
GRPE ++ DP WY+
Sbjct: 405 KGGRPEDISSGDPGWYQ 421
>AL109630-6|CAB51692.1| 444|Drosophila melanogaster EG:BACR7A4.20
protein.
Length = 444
Score = 180 bits (437), Expect = 3e-45
Identities = 85/257 (33%), Positives = 149/257 (57%), Gaps = 7/257 (2%)
Frame = -1
Query: 755 MKKWNISYKGQMWYQNNPSKFVDVDFTGEW-TATTKYFDFDTDLYPATVIRSIAKEKWSR 579
M+ W + Y G + Q + V VD + +++ ++FD++ DL A + SIA+E W+
Sbjct: 165 MRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHFDYNRDLSSALIADSIAREAWNE 224
Query: 578 EYFELLKTAH-----QSHYEQFGNLKCKFKIGEESFEYTLPSFRDHSFGHKRDWTLMYRY 414
+++ LL++ + ++HYEQ G L + + + + FRDHSFG +R + + RY
Sbjct: 225 KFYSLLRSVNHIVEKRTHYEQNGELAGQVTLDGKELALKMVGFRDHSFGTERCLSSINRY 284
Query: 413 AFHHIFLEDGTSISVGVICQPST-ASVFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAP 237
+ +F++DG+S+ VG + QPS S + G++ P ++ P+ + +LY +GE G P
Sbjct: 285 VYFALFMDDGSSMVVGSLSQPSFFLSSLKVGYVCSPERQYQPLTGSNFELYSYGEKGTPP 344
Query: 236 KDYAFQFKAGDEEYTVQVLVEYESIHYVSDEWDARMVERFCKFTVNNIPGRGVSEFHYRH 57
+ F + + EY VQ+ VE ++ YV +W++++ +F TVN +PG+G +EF YRH
Sbjct: 345 QHQNFIVRTEEREYLVQIQVEASALRYVGGDWESKVFNQFVACTVNGVPGQGHAEFLYRH 404
Query: 56 TDGRPESVAKNDPEWYR 6
GRPE ++ DP WY+
Sbjct: 405 KGGRPEDISSGDPGWYQ 421
>AE014298-126|AAF45566.1| 444|Drosophila melanogaster CG3706-PA
protein.
Length = 444
Score = 180 bits (437), Expect = 3e-45
Identities = 85/257 (33%), Positives = 149/257 (57%), Gaps = 7/257 (2%)
Frame = -1
Query: 755 MKKWNISYKGQMWYQNNPSKFVDVDFTGEW-TATTKYFDFDTDLYPATVIRSIAKEKWSR 579
M+ W + Y G + Q + V VD + +++ ++FD++ DL A + SIA+E W+
Sbjct: 165 MRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHFDYNRDLSSALIADSIAREAWNE 224
Query: 578 EYFELLKTAH-----QSHYEQFGNLKCKFKIGEESFEYTLPSFRDHSFGHKRDWTLMYRY 414
+++ LL++ + ++HYEQ G L + + + + FRDHSFG +R + + RY
Sbjct: 225 KFYSLLRSVNHIVEKRTHYEQNGELAGQVTLDGKELALKMVGFRDHSFGTERCLSSINRY 284
Query: 413 AFHHIFLEDGTSISVGVICQPST-ASVFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAP 237
+ +F++DG+S+ VG + QPS S + G++ P ++ P+ + +LY +GE G P
Sbjct: 285 VYFALFMDDGSSMVVGSLSQPSFFLSSLKVGYVCSPERQYQPLTGSNFELYSYGEKGTPP 344
Query: 236 KDYAFQFKAGDEEYTVQVLVEYESIHYVSDEWDARMVERFCKFTVNNIPGRGVSEFHYRH 57
+ F + + EY VQ+ VE ++ YV +W++++ +F TVN +PG+G +EF YRH
Sbjct: 345 QHQNFIVRTEEREYLVQIQVEASALRYVGGDWESKVFNQFVACTVNGVPGQGHAEFLYRH 404
Query: 56 TDGRPESVAKNDPEWYR 6
GRPE ++ DP WY+
Sbjct: 405 KGGRPEDISSGDPGWYQ 421
>BT021239-1|AAX33387.1| 584|Drosophila melanogaster RE71902p
protein.
Length = 584
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 338 VFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAPKDYAF 222
+F + + L + E+ PVKW+ L+ QH + +A +AF
Sbjct: 467 LFPSDYNCLGDSENRPVKWMSLEALQHKQFSEASDSWAF 505
>AY058760-1|AAL13989.1| 335|Drosophila melanogaster SD02824p
protein.
Length = 335
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 338 VFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAPKDYAF 222
+F + + L + E+ PVKW+ L+ QH + +A +AF
Sbjct: 218 LFPSDYNCLGDSENRPVKWMSLEALQHKQFSEASDSWAF 256
>AJ224361-1|CAA11918.1| 561|Drosophila melanogaster receptor
tyrosine kinase protein.
Length = 561
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 338 VFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAPKDYAF 222
+F + + L + E+ PVKW+ L+ QH + +A +AF
Sbjct: 444 LFPSDYNCLGDSENRPVKWMSLEALQHKQFSEASDSWAF 482
>AF123572-1|AAD31179.1| 565|Drosophila melanogaster Doughnut
precursor protein.
Length = 565
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 338 VFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAPKDYAF 222
+F + + L + E+ PVKW+ L+ QH + +A +AF
Sbjct: 448 LFPSDYNCLGDSENRPVKWMSLEALQHKQFSEASDSWAF 486
>AE014134-3068|AAF53783.2| 584|Drosophila melanogaster CG17559-PA
protein.
Length = 584
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 338 VFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAPKDYAF 222
+F + + L + E+ PVKW+ L+ QH + +A +AF
Sbjct: 467 LFPSDYNCLGDSENRPVKWMSLEALQHKQFSEASDSWAF 505
>AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer
protein.
Length = 1854
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 518 KCKFKIGEESFEYTLPSFRDHSFGHKRDWTLMYRYAFHHI 399
+CK ++ + YT P+ +D HK WTLM R ++
Sbjct: 1163 QCKMEVVQTLLAYTQPNEQDEESLHKSLWTLMIREVLKNV 1202
>AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA
protein.
Length = 1854
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 518 KCKFKIGEESFEYTLPSFRDHSFGHKRDWTLMYRYAFHHI 399
+CK ++ + YT P+ +D HK WTLM R ++
Sbjct: 1163 QCKMEVVQTLLAYTQPNEQDEESLHKSLWTLMIREVLKNV 1202
>AY051492-1|AAK92916.1| 627|Drosophila melanogaster GH14707p
protein.
Length = 627
Score = 29.9 bits (64), Expect = 4.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 467 FRDHSFGHKRD-WTLMYRYAFHH-IFLEDGTSISVGVICQPSTASVFEAGWIALPNKE 300
F D HKR T+ Y+YA H +F DGT ++V + E G + NKE
Sbjct: 453 FWDLLMSHKRPILTIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKE 510
>AE014134-2349|AAF53301.1| 627|Drosophila melanogaster CG10859-PA
protein.
Length = 627
Score = 29.9 bits (64), Expect = 4.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 467 FRDHSFGHKRD-WTLMYRYAFHH-IFLEDGTSISVGVICQPSTASVFEAGWIALPNKE 300
F D HKR T+ Y+YA H +F DGT ++V + E G + NKE
Sbjct: 453 FWDLLMSHKRPILTIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKE 510
>BT029259-1|ABK30896.1| 812|Drosophila melanogaster FI01119p
protein.
Length = 812
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 706 TPVSLSMWTSPESGQPLRNTLISTQICILRPSSGQ*PKKNGAENTLNCLK 557
T L+ TS S P+ L T I I +P + PKKN + CLK
Sbjct: 595 TSAPLTGQTSALSNVPVNKGLSPTSINIEKPKVSKKPKKNQSFQCTECLK 644
>BT021363-1|AAX33511.1| 712|Drosophila melanogaster LP11437p
protein.
Length = 712
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 706 TPVSLSMWTSPESGQPLRNTLISTQICILRPSSGQ*PKKNGAENTLNCLK 557
T L+ TS S P+ L T I I +P + PKKN + CLK
Sbjct: 495 TSAPLTGQTSALSNVPVNKGLSPTSINIEKPKVSKKPKKNQSFQCTECLK 544
>AY094965-1|AAM11318.1| 812|Drosophila melanogaster SD07008p
protein.
Length = 812
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 706 TPVSLSMWTSPESGQPLRNTLISTQICILRPSSGQ*PKKNGAENTLNCLK 557
T L+ TS S P+ L T I I +P + PKKN + CLK
Sbjct: 595 TSAPLTGQTSALSNVPVNKGLSPTSINIEKPKVSKKPKKNQSFQCTECLK 644
>AE014134-3153|ABC65908.1| 776|Drosophila melanogaster CG10462-PC,
isoform C protein.
Length = 776
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 706 TPVSLSMWTSPESGQPLRNTLISTQICILRPSSGQ*PKKNGAENTLNCLK 557
T L+ TS S P+ L T I I +P + PKKN + CLK
Sbjct: 559 TSAPLTGQTSALSNVPVNKGLSPTSINIEKPKVSKKPKKNQSFQCTECLK 608
>AE014134-3152|ABC65907.1| 776|Drosophila melanogaster CG10462-PB,
isoform B protein.
Length = 776
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 706 TPVSLSMWTSPESGQPLRNTLISTQICILRPSSGQ*PKKNGAENTLNCLK 557
T L+ TS S P+ L T I I +P + PKKN + CLK
Sbjct: 559 TSAPLTGQTSALSNVPVNKGLSPTSINIEKPKVSKKPKKNQSFQCTECLK 608
>AE014134-3151|AAF53838.2| 812|Drosophila melanogaster CG10462-PA,
isoform A protein.
Length = 812
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 706 TPVSLSMWTSPESGQPLRNTLISTQICILRPSSGQ*PKKNGAENTLNCLK 557
T L+ TS S P+ L T I I +P + PKKN + CLK
Sbjct: 595 TSAPLTGQTSALSNVPVNKGLSPTSINIEKPKVSKKPKKNQSFQCTECLK 644
>AE013599-3419|AAF46866.2| 775|Drosophila melanogaster CG33143-PB,
isoform B protein.
Length = 775
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 210 WRRRVHSSGPSGIRINPLRIRRMGCS--YGGEILQVHRQQHPGTRR 79
WRRR S PS R PL R +GC+ G I + + G RR
Sbjct: 401 WRRRQFSYDPSYFRPPPLPPRALGCADHQLGAITDANPSANAGRRR 446
>AY094932-1|AAM11285.1| 173|Drosophila melanogaster RH50933p
protein.
Length = 173
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 365 VICQPSTASVFEAGWIALPNKESYPVKW--VDLKLYQHGEGGQ 243
V CQ A +FE ++ E P +W DL LY H G +
Sbjct: 126 VSCQEKQADLFETRCLSYRVDEGQPQRWQFYDLALYTHVSGSE 168
>AE013599-409|AAF59257.3| 173|Drosophila melanogaster CG30503-PA
protein.
Length = 173
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 365 VICQPSTASVFEAGWIALPNKESYPVKW--VDLKLYQHGEGGQ 243
V CQ A +FE ++ E P +W DL LY H G +
Sbjct: 126 VSCQEKQADLFETRCLSYRVDEGQPQRWQFYDLALYTHVSGSE 168
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,554,173
Number of Sequences: 53049
Number of extensions: 920493
Number of successful extensions: 2174
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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