Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17b02
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051705-1|AAK93129.1| 787|Drosophila melanogaster LD24561p pro... 221 1e-57
AJ252018-1|CAB93521.1| 787|Drosophila melanogaster mitochondria... 221 1e-57
AE014134-3353|AAF53973.2| 787|Drosophila melanogaster CG9244-PB... 221 1e-57
AY089241-1|AAL89979.1| 783|Drosophila melanogaster AT02886p pro... 208 9e-54
AE014297-1239|AAF54588.2| 783|Drosophila melanogaster CG4706-PA... 208 9e-54
AY113650-1|AAM29655.1| 899|Drosophila melanogaster SD12606p pro... 58 1e-08
AY058657-1|AAL13886.1| 902|Drosophila melanogaster LD36161p pro... 58 1e-08
AJ252017-1|CAB93520.1| 899|Drosophila melanogaster iron regulat... 58 1e-08
AJ252016-1|CAB93519.1| 902|Drosophila melanogaster iron regulat... 58 1e-08
AJ223247-1|CAA11211.1| 902|Drosophila melanogaster iron regulat... 58 1e-08
AE014297-3221|AAF56051.1| 902|Drosophila melanogaster CG4900-PA... 58 1e-08
AE014297-1148|AAF54529.1| 899|Drosophila melanogaster CG6342-PA... 58 1e-08
AJ223248-1|CAA11212.1| 899|Drosophila melanogaster iron regulat... 56 7e-08
AE014298-1629|AAF48050.1| 404|Drosophila melanogaster CG1749-PA... 34 0.25
AE013599-852|AAF58947.2| 1290|Drosophila melanogaster CG8799-PA ... 29 5.4
AE014134-3385|AAN11116.1| 381|Drosophila melanogaster CG31622-P... 29 7.1
>AY051705-1|AAK93129.1| 787|Drosophila melanogaster LD24561p protein.
Length = 787
Score = 221 bits (539), Expect = 1e-57
Identities = 104/126 (82%), Positives = 112/126 (88%)
Frame = -3
Query: 749 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAA 570
G++W VGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQG+LPLTFAN A
Sbjct: 662 GIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPA 721
Query: 569 DYDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALN 390
DYDKI+P KISLL L SLAPGKPVD EIK+ D +RIKLNH+LND QI WFKAGSALN
Sbjct: 722 DYDKIQPTSKISLLNLKSLAPGKPVDAEIKNGD-KVERIKLNHTLNDLQIGWFKAGSALN 780
Query: 389 RMKEIA 372
RMKE+A
Sbjct: 781 RMKELA 786
>AJ252018-1|CAB93521.1| 787|Drosophila melanogaster mitochondrial
aconitase protein.
Length = 787
Score = 221 bits (539), Expect = 1e-57
Identities = 104/126 (82%), Positives = 112/126 (88%)
Frame = -3
Query: 749 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAA 570
G++W VGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQG+LPLTFAN A
Sbjct: 662 GIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPA 721
Query: 569 DYDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALN 390
DYDKI+P KISLL L SLAPGKPVD EIK+ D +RIKLNH+LND QI WFKAGSALN
Sbjct: 722 DYDKIQPTSKISLLNLKSLAPGKPVDAEIKNGD-KVERIKLNHTLNDLQIGWFKAGSALN 780
Query: 389 RMKEIA 372
RMKE+A
Sbjct: 781 RMKELA 786
>AE014134-3353|AAF53973.2| 787|Drosophila melanogaster CG9244-PB
protein.
Length = 787
Score = 221 bits (539), Expect = 1e-57
Identities = 104/126 (82%), Positives = 112/126 (88%)
Frame = -3
Query: 749 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAA 570
G++W VGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQG+LPLTFAN A
Sbjct: 662 GIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPA 721
Query: 569 DYDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALN 390
DYDKI+P KISLL L SLAPGKPVD EIK+ D +RIKLNH+LND QI WFKAGSALN
Sbjct: 722 DYDKIQPTSKISLLNLKSLAPGKPVDAEIKNGD-KVERIKLNHTLNDLQIGWFKAGSALN 780
Query: 389 RMKEIA 372
RMKE+A
Sbjct: 781 RMKELA 786
>AY089241-1|AAL89979.1| 783|Drosophila melanogaster AT02886p protein.
Length = 783
Score = 208 bits (507), Expect = 9e-54
Identities = 95/126 (75%), Positives = 111/126 (88%)
Frame = -3
Query: 746 VRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAAD 567
++WC VG+ENYGEGSSREHAALEPRHLGG AIIVKSFARIHETNLKKQGML LTFAN D
Sbjct: 653 IKWCAVGEENYGEGSSREHAALEPRHLGGVAIIVKSFARIHETNLKKQGMLALTFANPGD 712
Query: 566 YDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNR 387
YDK++P KIS+L L LAPGKPVD EIK+ +GS+D+I+LNH+LN+ QI WF+AGSALN
Sbjct: 713 YDKVQPSSKISILNLKDLAPGKPVDAEIKN-NGSSDKIQLNHTLNELQIQWFQAGSALNL 771
Query: 386 MKEIAS 369
MKE+A+
Sbjct: 772 MKELAA 777
>AE014297-1239|AAF54588.2| 783|Drosophila melanogaster CG4706-PA
protein.
Length = 783
Score = 208 bits (507), Expect = 9e-54
Identities = 95/126 (75%), Positives = 111/126 (88%)
Frame = -3
Query: 746 VRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAAD 567
++WC VG+ENYGEGSSREHAALEPRHLGG AIIVKSFARIHETNLKKQGML LTFAN D
Sbjct: 653 IKWCAVGEENYGEGSSREHAALEPRHLGGVAIIVKSFARIHETNLKKQGMLALTFANPGD 712
Query: 566 YDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNR 387
YDK++P KIS+L L LAPGKPVD EIK+ +GS+D+I+LNH+LN+ QI WF+AGSALN
Sbjct: 713 YDKVQPSSKISILNLKDLAPGKPVDAEIKN-NGSSDKIQLNHTLNELQIQWFQAGSALNL 771
Query: 386 MKEIAS 369
MKE+A+
Sbjct: 772 MKELAA 777
>AY113650-1|AAM29655.1| 899|Drosophila melanogaster SD12606p protein.
Length = 899
Score = 58.4 bits (135), Expect = 1e-08
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = -3
Query: 764 RTRRPGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLT 585
R R G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++PL
Sbjct: 768 RYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGMGIIPLQ 827
Query: 584 F--ANAADYDKIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINW 414
F +A+ + + ++ L + L PG+ + E DG+ L + I +
Sbjct: 828 FLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETILRFD-TEVDITY 883
Query: 413 FKAGSALNRM 384
+K G LN M
Sbjct: 884 YKNGGILNYM 893
>AY058657-1|AAL13886.1| 902|Drosophila melanogaster LD36161p protein.
Length = 902
Score = 58.4 bits (135), Expect = 1e-08
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Frame = -3
Query: 734 VVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYD 561
VVG ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++PL F +AD
Sbjct: 782 VVG-KDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHRSNLVGMGIIPLQFLPGQSADTL 840
Query: 560 KIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 384
K+ + ++ L L PG+ + + DG+ L + I ++K G LN M
Sbjct: 841 KLSGREVYNIVLPEGELKPGQRIQVD---ADGNVFETTLRFD-TEVDITYYKNGGILNYM 896
>AJ252017-1|CAB93520.1| 899|Drosophila melanogaster iron regulatory
protein 1B protein.
Length = 899
Score = 58.4 bits (135), Expect = 1e-08
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = -3
Query: 764 RTRRPGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLT 585
R R G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++PL
Sbjct: 768 RYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGMGIIPLQ 827
Query: 584 F--ANAADYDKIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINW 414
F +A+ + + ++ L + L PG+ + E DG+ L + I +
Sbjct: 828 FLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETILRFD-TEVDITY 883
Query: 413 FKAGSALNRM 384
+K G LN M
Sbjct: 884 YKNGGILNYM 893
>AJ252016-1|CAB93519.1| 902|Drosophila melanogaster iron regulatory
protein 1A protein.
Length = 902
Score = 58.4 bits (135), Expect = 1e-08
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Frame = -3
Query: 734 VVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYD 561
VVG ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++PL F +AD
Sbjct: 782 VVG-KDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHRSNLVGMGIIPLQFLPGQSADTL 840
Query: 560 KIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 384
K+ + ++ L L PG+ + + DG+ L + I ++K G LN M
Sbjct: 841 KLSGREVYNIVLPEGELKPGQRIQVD---ADGNVFETTLRFD-TEVDITYYKNGGILNYM 896
>AJ223247-1|CAA11211.1| 902|Drosophila melanogaster iron regulatory
protein-1A protein.
Length = 902
Score = 58.4 bits (135), Expect = 1e-08
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Frame = -3
Query: 734 VVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYD 561
VVG ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++PL F +AD
Sbjct: 782 VVG-KDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHRSNLVGMGIIPLQFLPGQSADTL 840
Query: 560 KIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 384
K+ + ++ L L PG+ + + DG+ L + I ++K G LN M
Sbjct: 841 KLSGREVYNIVLPEGELKPGQRIQVD---ADGNVFETTLRFD-TEVDITYYKNGGILNYM 896
>AE014297-3221|AAF56051.1| 902|Drosophila melanogaster CG4900-PA
protein.
Length = 902
Score = 58.4 bits (135), Expect = 1e-08
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Frame = -3
Query: 734 VVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYD 561
VVG ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++PL F +AD
Sbjct: 782 VVG-KDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHRSNLVGMGIIPLQFLPGQSADTL 840
Query: 560 KIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 384
K+ + ++ L L PG+ + + DG+ L + I ++K G LN M
Sbjct: 841 KLSGREVYNIVLPEGELKPGQRIQVD---ADGNVFETTLRFD-TEVDITYYKNGGILNYM 896
>AE014297-1148|AAF54529.1| 899|Drosophila melanogaster CG6342-PA
protein.
Length = 899
Score = 58.4 bits (135), Expect = 1e-08
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = -3
Query: 764 RTRRPGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLT 585
R R G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++PL
Sbjct: 768 RYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGMGIIPLQ 827
Query: 584 F--ANAADYDKIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINW 414
F +A+ + + ++ L + L PG+ + E DG+ L + I +
Sbjct: 828 FLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETILRFD-TEVDITY 883
Query: 413 FKAGSALNRM 384
+K G LN M
Sbjct: 884 YKNGGILNYM 893
>AJ223248-1|CAA11212.1| 899|Drosophila melanogaster iron regulatory
protein-1B protein.
Length = 899
Score = 55.6 bits (128), Expect = 7e-08
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Frame = -3
Query: 764 RTRRPGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLT 585
R R G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +N+ G++P
Sbjct: 768 RYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNMVGMGIIPXQ 827
Query: 584 F--ANAADYDKIKPDDKISL-LGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINW 414
F +A+ + + ++ L + L PG+ + E DG+ L + I +
Sbjct: 828 FLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETILRFD-TEVDITY 883
Query: 413 FKAGSALNRM 384
+K G LN M
Sbjct: 884 YKNGGILNYM 893
>AE014298-1629|AAF48050.1| 404|Drosophila melanogaster CG1749-PA
protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.25
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 506 GKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALN 390
G+PVD + D R+ +N + N++ +NWF++G + N
Sbjct: 172 GQPVDLVLSCVDNFEARMAINAACNERNLNWFESGVSEN 210
>AE013599-852|AAF58947.2| 1290|Drosophila melanogaster CG8799-PA
protein.
Length = 1290
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = -3
Query: 731 VGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIK 552
+G + EG S++ P A ++KS I + K P + + + IK
Sbjct: 384 LGSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWDPNSPDYTLSGINLE-IK 442
Query: 551 PDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLN-DQQINWFKAGS 399
P ++++GL + + ++ ++++N SL+ Q +W +G+
Sbjct: 443 PGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLFSGT 494
>AE014134-3385|AAN11116.1| 381|Drosophila melanogaster CG31622-PD,
isoform D protein.
Length = 381
Score = 29.1 bits (62), Expect = 7.1
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 43 YIHENIATYTKFIYLY*YNL--IRFTAVTKYCLRNALMY-YLNYTMTRLHWLHLIPLKRL 213
Y H ++ Y Y Y +R T + Y L+ Y +L + + I L L
Sbjct: 134 YTHLSLLIICMLNYAYGYWTAGVRLTTIPIYLLQYGFSYLFLGQVVVLFACIQQILLSIL 193
Query: 214 QYSRVNTISHIKATRNAPKQYV*DCSYN 297
+Y + +IK+++ + + Y C YN
Sbjct: 194 KYYNQVVLKNIKSSKESREFYYNFCKYN 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,089,627
Number of Sequences: 53049
Number of extensions: 491745
Number of successful extensions: 1187
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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