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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17a14
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089539-1|AAL90277.1|  544|Drosophila melanogaster LD10783p pro...   204   1e-52
AE014134-2983|AAF53713.1|  544|Drosophila melanogaster CG17320-P...   204   1e-52
X97685-1|CAA66277.1|  543|Drosophila melanogaster sterol carrier...   186   4e-47
AY071384-1|AAL49006.1|  115|Drosophila melanogaster RE42326p pro...    66   6e-11
AE014298-1953|AAF48311.1|  115|Drosophila melanogaster CG11151-P...    66   6e-11
AY047508-1|AAK77240.1|  412|Drosophila melanogaster GH01709p pro...    54   2e-07
AE014297-4159|AAF56735.1|  412|Drosophila melanogaster CG5590-PA...    54   2e-07
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    36   0.059
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    36   0.059
AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC...    31   1.7  
BT012324-1|AAS77449.1|  381|Drosophila melanogaster AT25482p pro...    31   2.2  
AY865075-2|AAW79481.1|  630|Drosophila melanogaster SR-CI protein.     31   2.2  
AY075365-1|AAR82806.1|  301|Drosophila melanogaster GM08848p pro...    31   2.2  
AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P...    31   2.2  
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P...    31   2.2  
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA...    31   2.2  
AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-P...    30   3.9  
AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-P...    29   5.1  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    29   5.1  
AE014296-367|AAF47577.2|  354|Drosophila melanogaster CG12023-PA...    29   6.8  
AE014296-2483|AAN11792.1|  175|Drosophila melanogaster CG6988-PB...    29   8.9  

>AY089539-1|AAL90277.1|  544|Drosophila melanogaster LD10783p
           protein.
          Length = 544

 Score =  204 bits (498), Expect = 1e-52
 Identities = 100/155 (64%), Positives = 123/155 (79%), Gaps = 5/155 (3%)
 Frame = -1

Query: 750 VVITMYRKGF---SNVTPNNVAA--VADNPEGFKVFKYMKILEEAMQTDQDNLIEKVRGI 586
           VV+ +YR GF   ++V  N  AA   A + +GFKV   +K+LE+AMQ D+DNLIEKVR I
Sbjct: 390 VVVALYRLGFPAANSVVRNLTAAGKAATSEDGFKVAPLLKLLEQAMQEDKDNLIEKVRAI 449

Query: 585 YGFKVRNGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQKAF 406
           YGFKV NGP+G  G+WVI+AK+GKGK+ +NG++K DVTF ISD+DV +L++GKL PQKAF
Sbjct: 450 YGFKVNNGPNGQTGFWVIDAKQGKGKIIFNGTQKCDVTFIISDDDVFELLTGKLPPQKAF 509

Query: 405 FQGKIKIQGNMGLAMKLTDLQRQAAGRIETIRSKL 301
           FQGKIKIQGNMG AMKL DLQR A GRIE +RSKL
Sbjct: 510 FQGKIKIQGNMGFAMKLMDLQRSAQGRIEELRSKL 544


>AE014134-2983|AAF53713.1|  544|Drosophila melanogaster CG17320-PA
           protein.
          Length = 544

 Score =  204 bits (498), Expect = 1e-52
 Identities = 100/155 (64%), Positives = 123/155 (79%), Gaps = 5/155 (3%)
 Frame = -1

Query: 750 VVITMYRKGF---SNVTPNNVAA--VADNPEGFKVFKYMKILEEAMQTDQDNLIEKVRGI 586
           VV+ +YR GF   ++V  N  AA   A + +GFKV   +K+LE+AMQ D+DNLIEKVR I
Sbjct: 390 VVVALYRLGFPAANSVVRNLTAAGKAATSEDGFKVAPLLKLLEQAMQEDKDNLIEKVRAI 449

Query: 585 YGFKVRNGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQKAF 406
           YGFKV NGP+G  G+WVI+AK+GKGK+ +NG++K DVTF ISD+DV +L++GKL PQKAF
Sbjct: 450 YGFKVNNGPNGQTGFWVIDAKQGKGKIIFNGTQKCDVTFIISDDDVFELLTGKLPPQKAF 509

Query: 405 FQGKIKIQGNMGLAMKLTDLQRQAAGRIETIRSKL 301
           FQGKIKIQGNMG AMKL DLQR A GRIE +RSKL
Sbjct: 510 FQGKIKIQGNMGFAMKLMDLQRSAQGRIEELRSKL 544


>X97685-1|CAA66277.1|  543|Drosophila melanogaster sterol carrier
           protein x protein.
          Length = 543

 Score =  186 bits (452), Expect = 4e-47
 Identities = 96/156 (61%), Positives = 119/156 (76%), Gaps = 6/156 (3%)
 Frame = -1

Query: 750 VVITMYRKGF---SNVTPNNVAA--VADNPEGFKVFKYMKILEEAMQTDQDNLIEKVRGI 586
           VV+ +YR GF   ++V  N  AA   A + +GFKV   +K+LE+AMQ D+DNLIEKVR I
Sbjct: 390 VVVALYRLGFPAANSVVRNLTAAGKAATSEDGFKVAPLLKLLEQAMQEDKDNLIEKVRAI 449

Query: 585 YGFKVRNGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQKAF 406
           YGFKV NGP+G  G+WVI+AK+GKGK+ +NG++K DVTF ISD+DV +L++GKL PQKAF
Sbjct: 450 YGFKVNNGPNGQTGFWVIDAKQGKGKIIFNGTQKCDVTFIISDDDVFELLTGKLPPQKAF 509

Query: 405 FQGKIKIQGNMGLAMKLTDLQ-RQAAGRIETIRSKL 301
           FQGKIKIQGNMG AMKL DLQ    AG    +RSKL
Sbjct: 510 FQGKIKIQGNMGFAMKLMDLQDPPKAG--SRLRSKL 543


>AY071384-1|AAL49006.1|  115|Drosophila melanogaster RE42326p
           protein.
          Length = 115

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -1

Query: 597 VRGIYGFKV-RNGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLN 421
           V G++ +K+ ++G    E  W ++ K  K         K D T T++DED+ D+  GKLN
Sbjct: 26  VNGVFLYKITKDGKVAKE--WTLDCKNAKAYEGPAQGIKVDTTLTVADEDMVDIALGKLN 83

Query: 420 PQKAFFQGKIKIQGNMGLAMKLTDLQRQAA 331
           PQ AF +GK+KI GN+ L  KL  L +  A
Sbjct: 84  PQAAFMKGKLKIAGNIMLTQKLAPLLKTDA 113


>AE014298-1953|AAF48311.1|  115|Drosophila melanogaster CG11151-PA
           protein.
          Length = 115

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -1

Query: 597 VRGIYGFKV-RNGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLN 421
           V G++ +K+ ++G    E  W ++ K  K         K D T T++DED+ D+  GKLN
Sbjct: 26  VNGVFLYKITKDGKVAKE--WTLDCKNAKAYEGPAQGIKVDTTLTVADEDMVDIALGKLN 83

Query: 420 PQKAFFQGKIKIQGNMGLAMKLTDLQRQAA 331
           PQ AF +GK+KI GN+ L  KL  L +  A
Sbjct: 84  PQAAFMKGKLKIAGNIMLTQKLAPLLKTDA 113


>AY047508-1|AAK77240.1|  412|Drosophila melanogaster GH01709p
           protein.
          Length = 412

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = -1

Query: 609 LIEKVRGIYGFKVRNGPDGAE-GYWVINAKEGKGKV-TYNGSEKPDVTFTISDEDVADLI 436
           ++ K + ++ F +     GAE G W ++ K G G       +  PD T T++ ++  D+ 
Sbjct: 319 IVSKTQAVFQFNI----SGAEQGTWFLDLKNGSGSCGAGTPTAAPDATLTMNSKNFFDMF 374

Query: 435 SGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRI 322
           SGKL    A+  GK+KI G+   A+KL  L +    ++
Sbjct: 375 SGKLKAAPAYMTGKLKISGDFQKALKLEKLMKALKSKL 412


>AE014297-4159|AAF56735.1|  412|Drosophila melanogaster CG5590-PA
           protein.
          Length = 412

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = -1

Query: 609 LIEKVRGIYGFKVRNGPDGAE-GYWVINAKEGKGKV-TYNGSEKPDVTFTISDEDVADLI 436
           ++ K + ++ F +     GAE G W ++ K G G       +  PD T T++ ++  D+ 
Sbjct: 319 IVSKTQAVFQFNI----SGAEQGTWFLDLKNGSGSCGAGTPTAAPDATLTMNSKNFFDMF 374

Query: 435 SGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRI 322
           SGKL    A+  GK+KI G+   A+KL  L +    ++
Sbjct: 375 SGKLKAAPAYMTGKLKISGDFQKALKLEKLMKALKSKL 412


>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
           protein.
          Length = 1795

 Score = 35.9 bits (79), Expect = 0.059
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
 Frame = -2

Query: 749 SSSQCTVKDSQT*RRTMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRS 570
           ++SQ T   S T ++T   P  T    + +S T   L    + T TT  + +A +T +  
Sbjct: 617 TTSQKTTTASTTTKKTTTSPKTTKTTDIPTSTT-SKLSTTTQKTTTTTHKFTAATTSTEK 675

Query: 569 ETVQTAPRVTGSSMRKKAKGKSP--TTALKNPT*PSRSATKTWP 444
               T    T S+  KK+   SP  T++   PT   + +T+T P
Sbjct: 676 PKTTTEKTSTVSTTTKKSTESSPKPTSSTGKPTTTPKPSTRTTP 719


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
           protein.
          Length = 1795

 Score = 35.9 bits (79), Expect = 0.059
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
 Frame = -2

Query: 749 SSSQCTVKDSQT*RRTMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRS 570
           ++SQ T   S T ++T   P  T    + +S T   L    + T TT  + +A +T +  
Sbjct: 617 TTSQKTTTASTTTKKTTTSPKTTKTTDIPTSTT-SKLSTTTQKTTTTTHKFTAATTSTEK 675

Query: 569 ETVQTAPRVTGSSMRKKAKGKSP--TTALKNPT*PSRSATKTWP 444
               T    T S+  KK+   SP  T++   PT   + +T+T P
Sbjct: 676 PKTTTEKTSTVSTTTKKSTESSPKPTSSTGKPTTTPKPSTRTTP 719


>AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC
           protein.
          Length = 1430

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = -2

Query: 692 PSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 513
           PS    K + + +T RS K   K ++T  SR +     +R  +        GSS R+K K
Sbjct: 491 PSEEAEKEVTADSTKRSQKVVSKESKTILSRGNPNVVAARRVSTPKRRSPKGSSGRRKTK 550

Query: 512 GKSPTTALK 486
            ++P +  K
Sbjct: 551 QQTPPSTQK 559


>BT012324-1|AAS77449.1|  381|Drosophila melanogaster AT25482p
           protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = -2

Query: 692 PSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 513
           P PTT  +++     R+ + P K TR+   + +       +E  Q  P  + S + K+ K
Sbjct: 68  PEPTTPSSVK-----RTARTPAKNTRSVRQQLTLTEEPEENEVKQEKPSPSPSPVPKEGK 122

Query: 512 GKSPTTALKNPT*PSRSAT 456
           GK+      +P+ P R+ T
Sbjct: 123 GKAQRKPSVSPS-PGRTLT 140


>AY865075-2|AAW79481.1|  630|Drosophila melanogaster SR-CI protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = -2

Query: 644 SLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSR 465
           SL      T T+ +RKS  +T + S +  T  R T ++   KA     TT  K PT  S 
Sbjct: 395 SLPPTVTSTSTSTTRKSTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTST 454

Query: 464 SATKT 450
           +   T
Sbjct: 455 TPKPT 459


>AY075365-1|AAR82806.1|  301|Drosophila melanogaster GM08848p
           protein.
          Length = 301

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = -2

Query: 692 PSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 513
           P PTT  +++     R+ + P K TR+   + +       +E  Q  P  + S + K+ K
Sbjct: 78  PEPTTPSSVK-----RTARTPAKNTRSVRQQLTLTEEPEENEVKQEKPSPSPSPVPKEGK 132

Query: 512 GKSPTTALKNPT*PSRSAT 456
           GK+      +P+ P R+ T
Sbjct: 133 GKAQRKPSVSPS-PGRTLT 150


>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
           isoform A protein.
          Length = 1420

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = -2

Query: 692 PSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 513
           P PTT  +++     R+ + P K TR+   + +       +E  Q  P  + S + K+ K
Sbjct: 68  PEPTTPSSVK-----RTARTPAKNTRSVRQQLTLTEEPEENEVKQEKPSPSPSPVPKEGK 122

Query: 512 GKSPTTALKNPT*PSRSAT 456
           GK+      +P+ P R+ T
Sbjct: 123 GKAQRKPSVSPS-PGRTLT 140


>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
           isoform B protein.
          Length = 1430

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = -2

Query: 692 PSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 513
           P PTT  +++     R+ + P K TR+   + +       +E  Q  P  + S + K+ K
Sbjct: 78  PEPTTPSSVK-----RTARTPAKNTRSVRQQLTLTEEPEENEVKQEKPSPSPSPVPKEGK 132

Query: 512 GKSPTTALKNPT*PSRSAT 456
           GK+      +P+ P R+ T
Sbjct: 133 GKAQRKPSVSPS-PGRTLT 150


>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
            protein.
          Length = 3111

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -2

Query: 689  SPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGST-VSRSETVQTAPRVTGSSMRKKAK 513
            SP+ +  +++ +T  + K   K   T+ SRKSA S   S S   Q +P  T S  RK  K
Sbjct: 2248 SPSRKATIKTPHTSPTRKPIIKSPYTSPSRKSAKSPYTSPSRNRQRSPSPTRSPERKSKK 2307

Query: 512  GKSPTTALKNP 480
                + A + P
Sbjct: 2308 SPYTSPARRKP 2318


>AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-PA
            protein.
          Length = 1701

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
 Frame = -2

Query: 749  SSSQCTVKDSQT*RRTMWPPS--PTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVS 576
            ++++ T  +  T + T   P+  PTTRK L +  T     +     RTT    +  +T  
Sbjct: 1226 TTTKKTTHEPTTKKSTTLKPTEEPTTRKTLTTKTTREPTTKRVTTERTTREPTTRKTTTH 1285

Query: 575  RSETVQTAPRVTGSSMRKKAKGKSPTT--ALKNPT*PSRSATKT 450
            ++    T  + T      +   K  TT    + PT    S TKT
Sbjct: 1286 KTTEEPTTKKTTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKT 1329


>AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-PA
           protein.
          Length = 1354

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
 Frame = -2

Query: 734 TVKDSQT*RRTMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSR------ 573
           T+K + T   T+ P   TTRK + +S    +  +P  P  TT    +   T  +      
Sbjct: 656 TIKTTATPSTTVKPKPRTTRKTITTSKP--TTPKPTTPKTTTSKPTTPKITTPKPTTPKP 713

Query: 572 SETVQTAPRVTGS--SMRKKAKGKSPTTALKNPT*PSRSATKT 450
           S T  T P+ + +  ++  K+  + PTT + +   P+ + T T
Sbjct: 714 STTKTTTPKSSSAKPALPPKSTTQRPTTPIPSTPAPTTTTTST 756


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
 Frame = -2

Query: 749 SSSQCTVKDSQT*RRTMWPPSPTTRKALRSSNT*---RSLKRPCKPTRTT*SRKSAGST- 582
           ++ +CT   S     T  P S TT    R + T     +    C PTRTT    +  ST 
Sbjct: 270 TTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRSTTTTSTS 329

Query: 581 -----VSRSETVQTAPRVTGSSMRKKAKGKS--PTTALKNP-T*PSRSATKT 450
                  R  T  +  R T ++ R   K  +  PTT    P T PS S   T
Sbjct: 330 RPTTTTPRCTTTPSTSRPTTTTPRSTTKTSTCAPTTTTPRPTTTPSTSRPTT 381



 Score = 28.7 bits (61), Expect = 8.9
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
 Frame = -2

Query: 749 SSSQCTVKDSQT*RRTMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRS 570
           +++ CT   + T  R+   PS T+R    +  +  +    C PT TT     + +T S S
Sbjct: 515 TTTTCTCSPTTTTPRSTTTPS-TSRPTTTTPRS-TTTTCTCSPTTTT---PRSTTTTSTS 569

Query: 569 ETVQTAPRVTGSSMRKKAKGKSP----TTALKNPT*PSRSATKT 450
               T PR T ++   +    +P    TT+   PT  +  +T T
Sbjct: 570 RPTTTTPRSTTTTTTSRPTTTTPRSTTTTSTSGPTTTTPRSTTT 613


>AE014296-367|AAF47577.2|  354|Drosophila melanogaster CG12023-PA,
           isoform A protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 433 RETEPSEGVLPRKDQDPGQHGAGYEAD*FAASSRR 329
           RE  PSE     ++  P  HGAG E D  AA+  +
Sbjct: 299 REERPSEEAQQAEEAPPAAHGAGEEGDEEAAAGAK 333


>AE014296-2483|AAN11792.1|  175|Drosophila melanogaster CG6988-PB,
           isoform B protein.
          Length = 175

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -2

Query: 698 WPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAP-RVTGSSMRK 522
           W P PT+ +ALRS  + +S     + TR++ S  +  S +S S ++ T    +   S R 
Sbjct: 84  WTPLPTSWRALRSRPSPQSNTSARRTTRSSTSTWTGLSMISSSSSMPTVRWPIPSPSRRP 143

Query: 521 KAKGKSP 501
           + + + P
Sbjct: 144 RRRRRRP 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,017,417
Number of Sequences: 53049
Number of extensions: 631911
Number of successful extensions: 1685
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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