Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17a11
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 71 1e-12
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 71 1e-12
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 53 2e-07
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 53 2e-07
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 46 3e-05
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 46 3e-05
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 42 7e-04
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 41 0.001
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 38 0.007
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 37 0.015
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 37 0.015
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 37 0.020
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 36 0.027
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 36 0.036
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 36 0.036
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 36 0.036
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41625-4|ABC71830.1| 43|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical ... 31 1.3
Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical pr... 29 3.1
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 29 3.1
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 29 3.1
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 29 3.1
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 29 5.4
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 5.4
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 28 7.2
U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical pr... 28 9.5
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
LTDEEVDEMIREADIDGDGQVNYEEFVTMMT+K
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
T+ E+ +MI E D DG+G +++ EF+TMM K
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
LTDEEVDEMIREADIDGDGQVNYEEFVTMMT+K
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
T+ E+ +MI E D DG+G +++ EF+TMM K
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/32 (62%), Positives = 30/32 (93%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++EEVDEMI+E D+DGDG+++YEEFV MM+++
Sbjct: 187 SEEEVDEMIKEVDVDGDGEIDYEEFVKMMSNQ 218
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
T++E+ EMI E DIDG+GQ+ + EF MM
Sbjct: 115 TEQEILEMINEVDIDGNGQIEFPEFCVMM 143
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/32 (62%), Positives = 30/32 (93%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++EEVDEMI+E D+DGDG+++YEEFV MM+++
Sbjct: 130 SEEEVDEMIKEVDVDGDGEIDYEEFVKMMSNQ 161
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
T++E+ EMI E DIDG+GQ+ + EF MM
Sbjct: 58 TEQEILEMINEVDIDGNGQIEFPEFCVMM 86
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
+D+EVDE+I E DIDGDGQ++YEEF + ++
Sbjct: 141 SDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
T++E+ +M+ E DIDG G +++ EF MM
Sbjct: 69 TEQELLDMVNEVDIDGSGTIDFGEFCQMM 97
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
+D+EVDE+I E DIDGDGQ++YEEF + ++
Sbjct: 141 SDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
T++E+ +M+ E DIDG G +++ EF MM
Sbjct: 69 TEQELLDMVNEVDIDGSGTIDFGEFCQMM 97
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQV 774
LTDEEVDEMIREADIDGDGQ+
Sbjct: 66 LTDEEVDEMIREADIDGDGQI 86
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 812 MIREADIDGDGQVNYEEFVTMMTSK 738
MI E D DG+G +++ EF+T+M K
Sbjct: 1 MINEVDADGNGTIDFPEFLTVMARK 25
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
++EEVDE+IRE D DGD Q++ +EFV M+
Sbjct: 129 SEEEVDEIIREVDKDGDEQIDLDEFVNMV 157
Score = 35.5 bits (78), Expect = 0.047
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
T+EE+ M+ E D+DG+G++++ EF MM
Sbjct: 57 TEEELLNMVNEYDVDGNGKIDFGEFCKMM 85
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
+++EE+DEMI E D DG G V+++EF+ MM+ +
Sbjct: 128 VSEEELDEMIAEIDADGSGTVDFDEFMEMMSGE 160
Score = 32.7 bits (71), Expect = 0.33
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -3
Query: 830 DEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
+ ++ ++I+E D DG G++ +EEF M+ +
Sbjct: 53 ERDLKQLIKEFDADGSGEIEFEEFAAMVAN 82
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
+++EE+DEMI E D DG G V+++EF+ MM+ +
Sbjct: 128 VSEEELDEMIAEIDADGSGTVDFDEFMEMMSGE 160
Score = 32.7 bits (71), Expect = 0.33
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -3
Query: 830 DEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
+ ++ ++I+E D DG G++ +EEF M+ +
Sbjct: 53 ERDLKQLIKEFDADGSGEIEFEEFAAMVAN 82
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFV 756
LT+EE+D+ IR ADI GDG V+ EEF+
Sbjct: 312 LTEEEIDDGIRSADISGDGLVDLEEFI 338
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
T+EE+ ++ ++ D DGDG ++ E +MT+
Sbjct: 277 TEEEIRKVFQDLDKDGDGFISVAELQAVMTN 307
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -3
Query: 824 EVDEMIREADIDGDGQVNYEEFVTMMT 744
EV+EM+ E D DG+G+++YEEFV + +
Sbjct: 138 EVEEMMNEVDCDGNGEIDYEEFVKIFS 164
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
T++++ E+I + D+DG+GQV + EF MM
Sbjct: 63 TEQQMMEIIHDVDLDGNGQVEFPEFCVMM 91
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = -3
Query: 836 LTDEEV-DEMIREADIDGDGQVNYEEFVTMM 747
+TD ++ DE+ EAD+DG+G ++Y+EF M+
Sbjct: 162 ITDNQIIDEIFNEADVDGNGVIDYDEFTYMV 192
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
T +E+D++I E D G+ Q++++EF +M
Sbjct: 90 TRDELDKIIDEVDQRGNHQIDFDEFCVVM 118
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 37.1 bits (82), Expect = 0.015
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
LT+ E EMI++ D+D DG ++++EFV ++
Sbjct: 113 LTETEAKEMIKQGDLDHDGMIDFQEFVNII 142
Score = 30.7 bits (66), Expect = 1.3
Identities = 9/29 (31%), Positives = 23/29 (79%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMM 747
++ +++ MI +AD+DG+G ++ +EF+ ++
Sbjct: 41 SNSKIETMIEQADLDGNGCIDIDEFLNVL 69
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 36.7 bits (81), Expect = 0.020
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYEEFVTMMTSK 738
V ++R +D+ GDGQ+++EEF+ +TSK
Sbjct: 88 VQAVMRSSDVSGDGQIDFEEFLAAVTSK 115
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 36.3 bits (80), Expect = 0.027
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
L+D+++ + R D + DG++N++EF MMT K
Sbjct: 123 LSDQDIKAIYRHVDQNNDGKINFQEFCEMMTRK 155
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTM 750
T++E+D M + AD D DG ++++EF+ +
Sbjct: 55 TEDELDAMFQAADKDCDGNIDFQEFLVI 82
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
LTD++++E + E D DG G++ +EEF +M +
Sbjct: 127 LTDQQLEEAVDEIDEDGSGKIEFEEFWELMAGE 159
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
LTD++++E + E D DG G++ +EEF +M +
Sbjct: 127 LTDQQLEEAVDEIDEDGSGKIEFEEFWELMAGE 159
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
LTD++++E + E D DG G++ +EEF +M +
Sbjct: 127 LTDQQLEEAVDEIDEDGSGKIEFEEFWELMAGE 159
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 35.5 bits (78), Expect = 0.047
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -3
Query: 824 EVDEMIREADIDGDGQVNYEEFVTMM 747
E+D +I+E D DG+G++++EEF M
Sbjct: 88 EIDNVIKEVDADGNGEIDFEEFCACM 113
>Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical
protein F30A10.1 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYEEF 759
++ +I EAD+DGD +N+ EF
Sbjct: 273 IERIIEEADLDGDSSINFAEF 293
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 830 DEEVDEMIREADIDGDGQVNYEEFVTMM 747
D+ D I EAD D DG+++++EF M
Sbjct: 153 DKIADRTIEEADADRDGKISFDEFCRAM 180
>U41625-4|ABC71830.1| 43|Caenorhabditis elegans Hypothetical
protein K03A1.4b protein.
Length = 43
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYE 765
V+++ EADIDGDG++++E
Sbjct: 21 VEQLFNEADIDGDGKISFE 39
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYE 765
V+++ EADIDGDG++++E
Sbjct: 242 VEQLFNEADIDGDGKISFE 260
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYEEFVTMM 747
+ +M + D++GDG++ + EFV MM
Sbjct: 133 ISDMFKATDLNGDGKITFFEFVKMM 157
>AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical
protein Y71H2AL.1 protein.
Length = 196
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 818 DEMIREADIDGDGQVNYEEFVTMM 747
D +READ DGDG + ++EF M
Sbjct: 158 DRTMREADRDGDGFITFQEFCNAM 181
>Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical
protein R08D7.5 protein.
Length = 148
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
L D + DEMIREA D + +N ++F +M
Sbjct: 113 LADADFDEMIREAGGDNNTGINEQQFFEIM 142
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFV 756
L+ +E DE+++ + DG+G V YE+F+
Sbjct: 116 LSADEADELLKGVE-DGEGMVKYEDFI 141
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -3
Query: 836 LTDEEVDEMIREADIDGDGQVNYEEFV 756
L+ +E DE+++ + DG+G V YE+F+
Sbjct: 116 LSADEADELLKGVE-DGEGMVKYEDFI 141
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 830 DEEVDEMIREADIDGDGQVNYEEFVTMM 747
D+ D+ + EAD D DG++++E+F M
Sbjct: 171 DKIADKTLEEADQDRDGKISFEDFCRAM 198
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 507 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 400
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 507 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 400
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 507 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 400
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 423 TRARHLYHHIATHTGRLPFVPLQLNFS 503
+R+ HL H+ THTG P+ N+S
Sbjct: 407 SRSDHLSTHLRTHTGEKPYACPMCNYS 433
>U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical
protein T03F1.11 protein.
Length = 81
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 815 EMIREADIDGDGQVNYEEF 759
++I+EAD DGD ++ ++EF
Sbjct: 54 QVIKEADKDGDSKITFDEF 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,944,232
Number of Sequences: 27780
Number of extensions: 313742
Number of successful extensions: 978
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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