Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17a10
         (277 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC073275-1|AAQ93366.1|  111|Homo sapiens unknown protein.              30   1.5  
BC121046-1|AAI21047.1|  153|Homo sapiens ADAM18 protein protein.       28   4.6  
BC121045-1|AAI21046.1|  739|Homo sapiens ADAM metallopeptidase d...    28   4.6  
AY358321-1|AAQ88687.1|  715|Homo sapiens ADAM18 protein.               28   4.6  
AJ133004-1|CAB40812.1|  739|Homo sapiens tMDC III protein protein.     28   4.6  
BC043006-1|AAH43006.1|  670|Homo sapiens C21orf13 protein protein.     27   8.0  
BC031059-1|AAH31059.1|  670|Homo sapiens chromosome 21 open read...    27   8.0  
AL163279-5|CAB90455.1|  691|Homo sapiens C21orf13 protein.             27   8.0  
AF121781-1|AAD12066.1|  670|Homo sapiens unknown protein.              27   8.0  

>AC073275-1|AAQ93366.1|  111|Homo sapiens unknown protein.
          Length = 111

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 83  ICLFVFVXHSSXYFGWLKKKNNPXGN---DVYXAIL 181
           +C++++   +  YF +LK KN P  N   DVY  IL
Sbjct: 40  VCIYIYKRKTYIYFNYLKCKNLPNTNGKSDVYYIIL 75


>BC121046-1|AAI21047.1|  153|Homo sapiens ADAM18 protein protein.
          Length = 153

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 64  WVSWWEDLSFCICXPFFKXFWLVEKKEQSXRK*C 165
           W +W+  LSFCI  PFF  F  V  K     K C
Sbjct: 99  WNNWFI-LSFCIFLPFFIVFTTVIFKRNEISKSC 131


>BC121045-1|AAI21046.1|  739|Homo sapiens ADAM metallopeptidase
           domain 18 protein.
          Length = 739

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 64  WVSWWEDLSFCICXPFFKXFWLVEKKEQSXRK*C 165
           W +W+  LSFCI  PFF  F  V  K     K C
Sbjct: 685 WNNWFI-LSFCIFLPFFIVFTTVIFKRNEISKSC 717


>AY358321-1|AAQ88687.1|  715|Homo sapiens ADAM18 protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 64  WVSWWEDLSFCICXPFFKXFWLVEKKEQSXRK*C 165
           W +W+  LSFCI  PFF  F  V  K     K C
Sbjct: 661 WNNWFI-LSFCIFLPFFIVFTTVIFKRNEISKSC 693


>AJ133004-1|CAB40812.1|  739|Homo sapiens tMDC III protein protein.
          Length = 739

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 64  WVSWWEDLSFCICXPFFKXFWLVEKKEQSXRK*C 165
           W +W+  LSFCI  PFF  F  V  K     K C
Sbjct: 685 WNNWFI-LSFCIFLPFFIVFTTVIFKRNEISKSC 717


>BC043006-1|AAH43006.1|  670|Homo sapiens C21orf13 protein protein.
          Length = 670

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 158 FLXDCSFFSTNQNXLKNG*QIQKDKSSHHETQXXREAXQKXXS 30
           FL DCS  + N+N LK     +K+K  ++ ++  +   QK  S
Sbjct: 71  FLCDCSEKAINRNYLKQPVVKEKEKKKYNVSKISQSKGQKEIS 113


>BC031059-1|AAH31059.1|  670|Homo sapiens chromosome 21 open reading
           frame 13 protein.
          Length = 670

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 158 FLXDCSFFSTNQNXLKNG*QIQKDKSSHHETQXXREAXQKXXS 30
           FL DCS  + N+N LK     +K+K  ++ ++  +   QK  S
Sbjct: 71  FLCDCSEKAINRNYLKQPVVKEKEKKKYNVSKISQSKGQKEIS 113


>AL163279-5|CAB90455.1|  691|Homo sapiens C21orf13 protein.
          Length = 691

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 158 FLXDCSFFSTNQNXLKNG*QIQKDKSSHHETQXXREAXQKXXS 30
           FL DCS  + N+N LK     +K+K  ++ ++  +   QK  S
Sbjct: 92  FLCDCSEKAINRNYLKQPVVKEKEKKKYNVSKISQSKGQKEIS 134


>AF121781-1|AAD12066.1|  670|Homo sapiens unknown protein.
          Length = 670

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 158 FLXDCSFFSTNQNXLKNG*QIQKDKSSHHETQXXREAXQKXXS 30
           FL DCS  + N+N LK     +K+K  ++ ++  +   QK  S
Sbjct: 71  FLCDCSEKAINRNYLKQPVVKEKEKKKYNVSKISQSKGQKEIS 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,162,424
Number of Sequences: 237096
Number of extensions: 424457
Number of successful extensions: 357
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)