Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17a06
(821 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 27 0.28
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.85
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.85
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.85
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.85
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 25 0.85
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 1.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 1.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 1.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 1.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 1.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 1.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 1.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 24 2.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.5
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 6.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 7.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 7.9
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 7.9
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 26.6 bits (56), Expect = 0.28
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYK 360
N KY N N+YN+ N + YK
Sbjct: 88 NYKYSNYNNYNNYNKKLYYK 107
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.85
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 301 NEKYENDNSYNSKN-TNIIYKK 363
N KY N N+YN+ N N YKK
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKK 109
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.85
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 301 NEKYENDNSYNSKN-TNIIYKK 363
N KY N N+YN+ N N YKK
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKK 109
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.85
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 301 NEKYENDNSYNSKN-TNIIYKK 363
N KY N N+YN+ N N YKK
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKK 109
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.85
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 301 NEKYENDNSYNSKN-TNIIYKK 363
N KY N N+YN+ N N YKK
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKK 109
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 365 DNNKYHNQ*YNIFTQFSQNITRYTKKLVFIN 457
+NN Y+N YN + + N Y K IN
Sbjct: 92 NNNNYNNNNYNNYNYNNNNYNNYKKLYYNIN 122
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 295 LFNEKYENDNSYNSKNTN 348
L N+ N+N+YN+ N N
Sbjct: 85 LSNKTIHNNNNYNNNNYN 102
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTNIIYKK 363
N Y N N+YN+ N YKK
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKK 108
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTN 348
N KY N N+YN+ N N
Sbjct: 321 NYKYSNYNNYNNYNNN 336
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 286 NLYLFNEKYENDNSYNSKNTNIIYKK 363
N Y ++ Y N N+YN+ N N KK
Sbjct: 320 NNYKYSN-YNNYNNYNNNNYNNYNKK 344
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 316 NDNSYNSKNTNIIYK 360
N+N+YN+ N + YK
Sbjct: 334 NNNNYNNYNKKLYYK 348
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 298 FNEKYENDNSYNSKNTNIIYKK 363
+N Y N N+YN+ N N YKK
Sbjct: 330 YNNNYNNYNNYNN-NYNNNYKK 350
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTN 348
N KY N N+YN+ N
Sbjct: 321 NYKYSNYNNYNNNYNN 336
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = +1
Query: 286 NLYLFN-EKYENDNSYNSK 339
N Y+ N Y NDN+YN K
Sbjct: 87 NNYISNISNYNNDNNYNKK 105
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 338 KILILYIKKDNNKYHNQ*YNIFTQFSQNITRYTKKLVFIN 457
KI+ K + +N YN +++ N Y KKL + N
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNKYNYNNNNYNKKLYYKN 119
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTN 348
N KY +N YN N N
Sbjct: 95 NYKYNYNNKYNYNNNN 110
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 295 LFNEKYENDNSYNSKNTNIIYKK 363
L N+ N+N+YN+ N N YKK
Sbjct: 85 LSNKTIHNNNNYNNNNYN-NYKK 106
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 295 LFNEKYENDNSYNSKNTNIIY 357
L N+ N+N+YN+ N N Y
Sbjct: 318 LSNKTIHNNNNYNNNNYNNNY 338
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 295 LFNEKYENDNSYNSKNTNIIY 357
L N+ N+N+YN+ N +Y
Sbjct: 307 LSNKTIHNNNNYNNYNNKKLY 327
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 1 RPHPCXXVLKELCLNTVPKVKY-SRNIT 81
RPHP V KE C V V+ S N+T
Sbjct: 110 RPHPHNLVGKEACKQGVCTVEVSSENMT 137
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.2 bits (45), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 1 RPHPCXXVLKELCLNTVPKVKY-SRNIT 81
RPHP V KE C V V+ S N+T
Sbjct: 110 RPHPHNLVGKEACKQGVCTVEVSSENMT 137
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTN 348
N KY N N+YN+ N
Sbjct: 88 NYKYSNYNNYNNNYNN 103
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 301 NEKYENDNSYNSKNTN 348
N KY N N+YN+ N
Sbjct: 88 NYKYSNYNNYNNNYNN 103
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 283 QNLYLFNEKYENDNSYNSKNTNIIYKK 363
QNL+ ++ +E+D K NI+ ++
Sbjct: 51 QNLHESDDLHESDGRVGGKRRNILLRR 77
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,005
Number of Sequences: 438
Number of extensions: 3951
Number of successful extensions: 48
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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