Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt16p05
         (198 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC098440-1|AAH98440.1|  542|Homo sapiens OTUD5 protein protein.        28   4.8  
BC028225-1|AAH28225.1|  561|Homo sapiens OTUD5 protein protein.        28   4.8  
BC009917-1|AAH09917.1|  571|Homo sapiens OTU domain containing 5...    28   4.8  
AK026260-1|BAB15416.1|  376|Homo sapiens protein ( Homo sapiens ...    28   4.8  
AK022612-1|BAB14131.1|  287|Homo sapiens protein ( Homo sapiens ...    28   4.8  

>BC098440-1|AAH98440.1|  542|Homo sapiens OTUD5 protein protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   INTFHELYQHSIQPI*MLYYYSSHESTV 88
           INTFH ++Q+  +PI + Y+ + H ++V
Sbjct: 282 INTFHGIHQNEDEPIRVSYHRNIHYNSV 309


>BC028225-1|AAH28225.1|  561|Homo sapiens OTUD5 protein protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   INTFHELYQHSIQPI*MLYYYSSHESTV 88
           INTFH ++Q+  +PI + Y+ + H ++V
Sbjct: 306 INTFHGIHQNEDEPIRVSYHRNIHYNSV 333


>BC009917-1|AAH09917.1|  571|Homo sapiens OTU domain containing 5
           protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   INTFHELYQHSIQPI*MLYYYSSHESTV 88
           INTFH ++Q+  +PI + Y+ + H ++V
Sbjct: 311 INTFHGIHQNEDEPIRVSYHRNIHYNSV 338


>AK026260-1|BAB15416.1|  376|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22607 fis, clone HSI04846. ).
          Length = 376

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   INTFHELYQHSIQPI*MLYYYSSHESTV 88
           INTFH ++Q+  +PI + Y+ + H ++V
Sbjct: 116 INTFHGIHQNEDEPIRVSYHRNIHYNSV 143


>AK022612-1|BAB14131.1|  287|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12550 fis, clone NT2RM4000698. ).
          Length = 287

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   INTFHELYQHSIQPI*MLYYYSSHESTV 88
           INTFH ++Q+  +PI + Y+ + H ++V
Sbjct: 27  INTFHGIHQNEDEPIRVSYHRNIHYNSV 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,430,137
Number of Sequences: 237096
Number of extensions: 351161
Number of successful extensions: 780
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1394963598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)