Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16o08
(369 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPK4 Cluster: Cytochrome c oxidase; n=3; Neoptera|Rep... 97 9e-20
UniRef50_Q9VMS1 Cluster: CG14028-PA; n=6; Diptera|Rep: CG14028-P... 77 8e-14
UniRef50_P09669 Cluster: Cytochrome c oxidase polypeptide VIc pr... 71 7e-12
UniRef50_P04038 Cluster: Cytochrome c oxidase polypeptide VIc; n... 71 9e-12
UniRef50_Q4PM34 Cluster: Cytochrome c oxidase subunit VIc; n=1; ... 69 3e-11
UniRef50_UPI00015548E5 Cluster: PREDICTED: similar to cytochrome... 66 2e-10
UniRef50_UPI0000587B5E Cluster: PREDICTED: similar to cytochrome... 65 3e-10
UniRef50_UPI00004477A4 Cluster: PREDICTED: hypothetical protein;... 56 2e-07
UniRef50_Q8T970 Cluster: AT20031p; n=2; Sophophora|Rep: AT20031p... 47 1e-04
UniRef50_A7GNI6 Cluster: Glycosyl transferase group 1; n=1; Baci... 35 0.41
UniRef50_Q7SAZ9 Cluster: Putative uncharacterized protein NCU076... 34 0.95
UniRef50_UPI00015B6329 Cluster: PREDICTED: similar to conserved ... 33 1.3
UniRef50_P20610 Cluster: Cytochrome c oxidase subunit 7s; n=2; D... 33 2.2
UniRef50_UPI000051A933 Cluster: PREDICTED: similar to CG2938-PB;... 32 2.9
UniRef50_Q1N2D3 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q974M6 Cluster: NAD-dependent deacetylase; n=8; Thermop... 32 2.9
UniRef50_Q1AST6 Cluster: Putative uncharacterized protein precur... 32 3.8
UniRef50_Q2HFY5 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A2FCL1 Cluster: Putative uncharacterized protein; n=13;... 31 6.7
UniRef50_A2E5I4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q8RCG4 Cluster: Methyl-accepting chemotaxis protein; n=... 31 8.9
UniRef50_O26638 Cluster: Protein MTH_538; n=1; Methanothermobact... 31 8.9
>UniRef50_A6YPK4 Cluster: Cytochrome c oxidase; n=3; Neoptera|Rep:
Cytochrome c oxidase - Triatoma infestans (Assassin bug)
Length = 76
Score = 97.1 bits (231), Expect = 9e-20
Identities = 44/73 (60%), Positives = 59/73 (80%)
Frame = -1
Query: 267 SAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEK 88
SAVST+ KPQ+RGLL++ IKRN+I+ L LS +GF FK IG+ RK++YAEFY+ YDAE+
Sbjct: 3 SAVSTSVKPQLRGLLHSQIKRNLIIGLVLSISSGFLFKTFIGDARKKQYAEFYKNYDAEE 62
Query: 87 EFEEMRKKGLFQS 49
+F+ M+ GLFQS
Sbjct: 63 DFKRMKSLGLFQS 75
>UniRef50_Q9VMS1 Cluster: CG14028-PA; n=6; Diptera|Rep: CG14028-PA -
Drosophila melanogaster (Fruit fly)
Length = 77
Score = 77.4 bits (182), Expect = 8e-14
Identities = 38/78 (48%), Positives = 49/78 (62%)
Frame = -1
Query: 279 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTY 100
MA A S+A P +RGL NA IKRN+ V+L L+ V +K L+ + +K YA+FY Y
Sbjct: 1 MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59
Query: 99 DAEKEFEEMRKKGLFQSC 46
DA K FE M+ G FQSC
Sbjct: 60 DANKSFERMKAAGRFQSC 77
>UniRef50_P09669 Cluster: Cytochrome c oxidase polypeptide VIc
precursor; n=36; Euteleostomi|Rep: Cytochrome c oxidase
polypeptide VIc precursor - Homo sapiens (Human)
Length = 75
Score = 70.9 bits (166), Expect = 7e-12
Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -1
Query: 246 KPQMRGLLNAVIKRNIIVALALS-GVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMR 70
KP+MRGLL ++ ++ VA LS GVA +K + ++RK+ YA+FYR YD K+FEEMR
Sbjct: 8 KPRMRGLLARRLRNHMAVAFVLSLGVAAL-YKFRVADQRKKAYADFYRNYDVMKDFEEMR 66
Query: 69 KKGLFQS 49
K G+FQS
Sbjct: 67 KAGIFQS 73
>UniRef50_P04038 Cluster: Cytochrome c oxidase polypeptide VIc; n=5;
Bos taurus|Rep: Cytochrome c oxidase polypeptide VIc -
Bos taurus (Bovine)
Length = 73
Score = 70.5 bits (165), Expect = 9e-12
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = -1
Query: 258 STA-SKPQMRGLLNAVIKRNIIVALALS-GVAGFTFKQLIGNERKRKYAEFYRTYDAEKE 85
STA +KPQMRGLL ++ +I+ A +S G A F +K + +RK+ YA+FYR YD+ K+
Sbjct: 1 STALAKPQMRGLLARRLRFHIVGAFMVSLGFATF-YKFAVAEKRKKAYADFYRNYDSMKD 59
Query: 84 FEEMRKKGLFQS 49
FEEMRK G+FQS
Sbjct: 60 FEEMRKAGIFQS 71
>UniRef50_Q4PM34 Cluster: Cytochrome c oxidase subunit VIc; n=1;
Ixodes scapularis|Rep: Cytochrome c oxidase subunit VIc
- Ixodes scapularis (Black-legged tick) (Deer tick)
Length = 76
Score = 68.9 bits (161), Expect = 3e-11
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -1
Query: 249 SKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMR 70
++PQ GLL + I++++I+ L+L+GV G + + RK+ YA+FY+TYDA + E M
Sbjct: 4 ARPQFHGLLKSYIRKHLIICLSLAGVGGVAWHYGVCEARKKAYADFYKTYDAAADNERMT 63
Query: 69 KKGLFQS 49
K GLFQS
Sbjct: 64 KLGLFQS 70
>UniRef50_UPI00015548E5 Cluster: PREDICTED: similar to cytochrome c
oxidase subunit VIc; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to cytochrome c oxidase subunit VIc -
Ornithorhynchus anatinus
Length = 138
Score = 66.1 bits (154), Expect = 2e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = -1
Query: 246 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 67
KPQMRGLL ++ +I+ A +S +K + RK+ YA+FYR YD+ K+FE+MRK
Sbjct: 69 KPQMRGLLAKRLRFHIVGAFTVSMGLAALYKFGVAEPRKKAYADFYRNYDSMKDFEDMRK 128
Query: 66 KGLFQS 49
G+FQS
Sbjct: 129 AGIFQS 134
>UniRef50_UPI0000587B5E Cluster: PREDICTED: similar to cytochrome c
oxidase subunit VIc; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome c
oxidase subunit VIc - Strongylocentrotus purpuratus
Length = 80
Score = 65.3 bits (152), Expect = 3e-10
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = -1
Query: 246 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 67
+P+MRGLL++ + R+ I+ LS K + + RK+ Y EFY+TYDA+ +FE MR+
Sbjct: 6 RPKMRGLLSSFLTRHFIIGSVLSLAGAGLVKVFLYDARKKLYTEFYKTYDAQADFERMRE 65
Query: 66 KGLFQS 49
G+FQS
Sbjct: 66 LGVFQS 71
>UniRef50_UPI00004477A4 Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 102
Score = 56.4 bits (130), Expect = 2e-07
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = -1
Query: 246 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 67
KPQMR LL +K ++ A +S +K + RKR YAEFY+ YD K+FE MR
Sbjct: 33 KPQMRRLLARRMKFHLFGAFLVSLGCAALYKFGVAEPRKRAYAEFYKNYDPMKDFEAMRA 92
Query: 66 KGLFQS 49
G+F+S
Sbjct: 93 AGVFES 98
>UniRef50_Q8T970 Cluster: AT20031p; n=2; Sophophora|Rep: AT20031p -
Drosophila melanogaster (Fruit fly)
Length = 87
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -1
Query: 207 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 46
RN+ +A L+ +A F L N RKRKY FY TYD F+ M G SC
Sbjct: 20 RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73
>UniRef50_A7GNI6 Cluster: Glycosyl transferase group 1; n=1;
Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
Glycosyl transferase group 1 - Bacillus cereus subsp.
cytotoxis NVH 391-98
Length = 689
Score = 35.1 bits (77), Expect = 0.41
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 231 GLLNAVIKRNIIVALALSG-VAGFTFKQLIGNERKRKYAEFYRTYDAE 91
GLLN+VIK + + L G + G + + + E+ RK AEFY+ YD E
Sbjct: 102 GLLNSVIKE-VFPNIPLVGTIHGCIYSETLMWEKNRKNAEFYKEYDDE 148
>UniRef50_Q7SAZ9 Cluster: Putative uncharacterized protein
NCU07626.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU07626.1 - Neurospora crassa
Length = 254
Score = 33.9 bits (74), Expect = 0.95
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 139 ITNELLEGKTSDARESQSNNNVTFDDGVEETSHL---RLARCRYCTF 270
+T GKT+ A+ N N+T+ +G + T H+ ARCR CTF
Sbjct: 39 VTGPTACGKTTVAKALAENLNLTYVEGDDPTFHVVCTLTARCRLCTF 85
>UniRef50_UPI00015B6329 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 1086
Score = 33.5 bits (73), Expect = 1.3
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +1
Query: 82 KFLFSI-IGSVEFSILSLALITNELLEGKTSDARESQSN-----NNVTFDDGVEETSHLR 243
KF SI IG V+ + + L T + +GK S + E+Q N+ F E HL
Sbjct: 526 KFFMSIGIGLVQEYVQTDLLRTQKRKQGKGSTSAETQMAINSLIKNLEFSKENNEPYHLE 585
Query: 244 LARCRYCTF 270
L +C +C+F
Sbjct: 586 LKKCEFCSF 594
>UniRef50_P20610 Cluster: Cytochrome c oxidase subunit 7s; n=2;
Dictyostelium discoideum|Rep: Cytochrome c oxidase
subunit 7s - Dictyostelium discoideum (Slime mold)
Length = 55
Score = 32.7 bits (71), Expect = 2.2
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1
Query: 228 LLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAE 91
++ + + ++I VAL L +AG FK + +++R+ FY YD E
Sbjct: 8 VVKSQLVQDIGVALILGSIAGCFFKYGVDKKKQRERVAFYEKYDKE 53
>UniRef50_UPI000051A933 Cluster: PREDICTED: similar to CG2938-PB;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG2938-PB
- Apis mellifera
Length = 791
Score = 32.3 bits (70), Expect = 2.9
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 19 YYTMDSSYLAGLE*TLLAHLLKFLFSIIGSVEFSILSLALITNELLEGKTSDARESQSNN 198
YYT S + H F+F IG V L + I+ +++GK SD E N+
Sbjct: 67 YYTQTDSRRCLRYLAFMGHHNHFVF--IGDVRIRQLYKSFISQFIVDGKASDLTELPENS 124
Query: 199 NVTFDD 216
++ F+D
Sbjct: 125 DLNFND 130
>UniRef50_Q1N2D3 Cluster: Putative uncharacterized protein; n=1;
Oceanobacter sp. RED65|Rep: Putative uncharacterized
protein - Oceanobacter sp. RED65
Length = 373
Score = 32.3 bits (70), Expect = 2.9
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +1
Query: 25 TMDSSYLAGLE*TLLAHLLKFLFSIIGSVEFSILSLALITNELLEGKTSDARESQSNNNV 204
T D LAG+ ++A + K+ G V FS+ ++T++ L G +SD E Q N +
Sbjct: 132 TGDILQLAGISLLIIAVIKKYFD--YGPVYFSLGLFIMLTSQWLRGLSSDISELQYLNRL 189
Query: 205 TFDD 216
F D
Sbjct: 190 LFSD 193
>UniRef50_Q974M6 Cluster: NAD-dependent deacetylase; n=8;
Thermoprotei|Rep: NAD-dependent deacetylase - Sulfolobus
tokodaii
Length = 250
Score = 32.3 bits (70), Expect = 2.9
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -1
Query: 231 GLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 52
GL+ A+I +NI L+G +L GN RK +TYD++ +++ K+GL
Sbjct: 90 GLIRAIITQNIDGLHQLAGSRNVI--ELHGNMRKCYCVNCLKTYDSDTVLDKIDKEGLPP 147
Query: 51 SC 46
C
Sbjct: 148 KC 149
>UniRef50_Q1AST6 Cluster: Putative uncharacterized protein
precursor; n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Putative uncharacterized protein precursor - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 309
Score = 31.9 bits (69), Expect = 3.8
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = -1
Query: 327 PLCN*AFLISVKL*LDMAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQL 148
PL + FL ++ + + +A + A +P G L AV + ALA VAG T +
Sbjct: 196 PLRSRRFLAALAMAAAVCAAAAGAGAQEPAAWGGLLAVSPAGLAAALAGGAVAGVTVRAR 255
Query: 147 IGNERKRKYAEFY 109
G R R AE +
Sbjct: 256 CGTLRGRMLAELF 268
>UniRef50_Q2HFY5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 855
Score = 31.5 bits (68), Expect = 5.1
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 85 FLFSIIGSVEFSILSLALITNELLEGKTSDARESQSNNNVTF-DDGVEETSHLRLARCRY 261
F+F II F I + I NEL G T + SQ+ ++ F DD + +H LA+ +
Sbjct: 387 FVFQIIAP--FIIPVIEQIKNELATGATEIIQSSQNEQHIVFDDDDSTDPTHSMLAKDHF 444
Query: 262 CTFASHV 282
+ +
Sbjct: 445 TNILNEI 451
>UniRef50_A2FCL1 Cluster: Putative uncharacterized protein; n=13;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2224
Score = 31.1 bits (67), Expect = 6.7
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 22 YTMDSSYLAGLE*TLLAHLLKFLFSIIGSVEFSILSLALITNELL 156
+ +S+YL G E + H+L F+ S++G+ E I S++ +T+ LL
Sbjct: 1295 FLSNSNYLEGFETDIFLHILTFINSLLGNNEI-INSISSVTDCLL 1338
>UniRef50_A2E5I4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 800
Score = 31.1 bits (67), Expect = 6.7
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 228 LLNAVI--KRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGL 58
L N++I KR+ +LAL+G GF + + NE K EF + Y KE+ E + L
Sbjct: 565 LANSIIDSKRDFRSSLALTGTIGFNYAEK-NNEIFEKSLEFSKIYMQCKEYPETMETAL 622
>UniRef50_Q8RCG4 Cluster: Methyl-accepting chemotaxis protein; n=3;
Thermoanaerobacter|Rep: Methyl-accepting chemotaxis
protein - Thermoanaerobacter tengcongensis
Length = 548
Score = 30.7 bits (66), Expect = 8.9
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
Frame = -1
Query: 270 ESAVSTASKPQMRGLL---NAVI---KRNIIVALALSGV---AGFTFKQLIGNERKRKYA 118
+SA++ S +G L N +I K+N V+LA+SGV F + +I + K KYA
Sbjct: 158 QSALNDFSSTYSQGFLPYFNKIIQDNKKNFYVSLAISGVILLILFVYATVIIRKLK-KYA 216
Query: 117 EFYRT--YDAEKEFEEMRK 67
EF + +AEK+ EE+ K
Sbjct: 217 EFINSEILNAEKQSEEVVK 235
>UniRef50_O26638 Cluster: Protein MTH_538; n=1; Methanothermobacter
thermautotrophicus str. Delta H|Rep: Protein MTH_538 -
Methanobacterium thermoautotrophicum
Length = 111
Score = 30.7 bits (66), Expect = 8.9
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +2
Query: 131 LRSLPMSCLKVKPATPERAKATIMLRLMTALRRPRI*GLLAVDTA 265
L L S L+ +PATPE A A I+L + RR I G AVD A
Sbjct: 21 LERLEQSGLEWRPATPEDADAVIVLAGLWGTRRDEILG--AVDLA 63
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,070,057
Number of Sequences: 1657284
Number of extensions: 5709326
Number of successful extensions: 15987
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15984
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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