Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16n10
(389 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50371-1|BAA23322.1| 69|Homo sapiens ATP synthase subunit e pr... 49 5e-06
BT006922-1|AAP35568.1| 69|Homo sapiens ATP synthase, H+ transp... 49 5e-06
BC105610-1|AAI05611.1| 69|Homo sapiens ATP synthase, H+ transp... 49 5e-06
BC003679-1|AAH03679.1| 69|Homo sapiens ATP synthase, H+ transp... 49 5e-06
M12529-1|AAB59518.1| 317|Homo sapiens apolipoprotein E protein. 31 1.3
M10065-1|AAB59397.1| 317|Homo sapiens apolipoprotein E protein. 31 1.3
K00396-1|AAB59546.1| 317|Homo sapiens preapolipoprotein E protein. 31 1.3
BC151242-1|AAI51243.1| 1983|Homo sapiens myosin, heavy chain 7B,... 31 1.3
BC007808-1|AAH07808.1| 1006|Homo sapiens MYH7B protein protein. 31 1.3
BC003557-1|AAH03557.1| 317|Homo sapiens apolipoprotein E protein. 31 1.3
AL133324-2|CAI19310.2| 1983|Homo sapiens myosin, heavy chain 7B,... 31 1.3
AL132825-6|CAI43047.2| 1983|Homo sapiens myosin, heavy chain 7B,... 31 1.3
AF261279-1|AAG27089.1| 317|Homo sapiens apolipoprotein-E protein. 31 1.3
AF050154-3|AAD02505.1| 317|Homo sapiens apolipoprotein E protein. 31 1.3
AB040945-1|BAA96036.2| 2010|Homo sapiens KIAA1512 protein protein. 31 1.3
D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein. 30 3.1
BC052279-1|AAH52279.1| 307|Homo sapiens leucine rich repeat con... 30 3.1
BC017168-1|AAH17168.1| 307|Homo sapiens leucine rich repeat con... 30 3.1
BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymera... 30 3.1
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 29 4.0
BC063692-1|AAH63692.1| 398|Homo sapiens THOC2 protein protein. 29 4.0
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 29 4.0
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 29 4.0
AK023659-1|BAB14630.1| 650|Homo sapiens protein ( Homo sapiens ... 29 4.0
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 29 4.0
X98260-1|CAA66913.1| 582|Homo sapiens M-phase phosphoprotein 11... 29 5.3
D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein. 29 5.3
BC139751-1|AAI39752.1| 620|Homo sapiens ZRF1 protein protein. 29 5.3
BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein. 29 5.3
AJ417790-1|CAD10507.1| 1791|Homo sapiens voltage-gated sodium ch... 29 5.3
AF188679-1|AAF17480.1| 1791|Homo sapiens voltage-gated sodium ch... 29 5.3
AF150882-1|AAF24980.1| 1444|Homo sapiens voltage-gated sodium ch... 29 5.3
AF109737-1|AAF24976.1| 1791|Homo sapiens voltage-gated sodium ch... 29 5.3
AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant... 29 5.3
X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein. 29 7.1
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 29 7.1
M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human ribonucle... 29 7.1
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 29 7.1
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 29 7.1
BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance ... 29 7.1
BC107891-1|AAI07892.1| 291|Homo sapiens SMC2 protein protein. 29 7.1
BC071750-1|AAH71750.1| 356|Homo sapiens SMC2 protein protein. 29 7.1
BC055081-1|AAH55081.1| 209|Homo sapiens SMC2 protein protein. 29 7.1
BC032705-1|AAH32705.1| 781|Homo sapiens SMC2 protein protein. 29 7.1
BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation ... 29 7.1
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 29 7.1
BC017845-1|AAH17845.1| 289|Homo sapiens Unknown (protein for IM... 29 7.1
BC003396-1|AAH03396.1| 289|Homo sapiens Unknown (protein for IM... 29 7.1
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 29 7.1
AY739716-1|AAW65985.1| 760|Homo sapiens chromosome-associated p... 29 7.1
AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance ... 29 7.1
AL161791-2|CAI16867.1| 145|Homo sapiens structural maintenance ... 29 7.1
AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance ... 29 7.1
AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein pr... 29 7.1
AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein. 29 7.1
AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated p... 29 7.1
AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation ... 29 7.1
AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein. 29 7.1
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 29 7.1
AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein. 29 7.1
Z97832-4|CAI20190.1| 631|Homo sapiens differentially expressed ... 28 9.3
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 28 9.3
X82835-1|CAA58042.1| 1977|Homo sapiens sodium channel alpha subu... 28 9.3
U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor... 28 9.3
U18985-1|AAA75315.1| 729|Homo sapiens triadin protein. 28 9.3
DQ857292-1|ABI51981.1| 1977|Homo sapiens voltage-gated sodium ch... 28 9.3
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 28 9.3
BC139910-1|AAI39911.1| 297|Homo sapiens TRDN protein protein. 28 9.3
BC128185-1|AAI28186.1| 862|Homo sapiens transient receptor pote... 28 9.3
BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor pote... 28 9.3
BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor pote... 28 9.3
BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly fact... 28 9.3
BC057222-1|AAH57222.1| 344|Homo sapiens TRDN protein protein. 28 9.3
BC052620-1|AAH52620.1| 411|Homo sapiens CHAF1A protein protein. 28 9.3
BC029393-1|AAH29393.1| 345|Homo sapiens TRDN protein protein. 28 9.3
AY682086-1|AAT85835.1| 539|Homo sapiens voltage-gated sodium ch... 28 9.3
AY682084-1|AAT85833.1| 528|Homo sapiens voltage-gated sodium ch... 28 9.3
AY241694-1|AAO91767.1| 631|Homo sapiens IRF4-binding protein pr... 28 9.3
AY167927-1|AAO12125.1| 746|Homo sapiens transient receptor pote... 28 9.3
AY167926-1|AAO12124.1| 806|Homo sapiens transient receptor pote... 28 9.3
AJ549089-1|CAD70162.1| 807|Homo sapiens transient receptor pote... 28 9.3
AJ549088-1|CAD70161.1| 801|Homo sapiens transient receptor pote... 28 9.3
AJ489257-1|CAD33526.2| 461|Homo sapiens triadin protein. 28 9.3
AJ421783-1|CAD19069.1| 862|Homo sapiens short transient recepto... 28 9.3
AJ276095-1|CAC08450.1| 631|Homo sapiens Def-6 protein protein. 28 9.3
AJ272034-1|CAC03489.1| 862|Homo sapiens putative capacitative c... 28 9.3
AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor pote... 28 9.3
AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor pote... 28 9.3
AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor pote... 28 9.3
AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor pote... 28 9.3
AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly fact... 28 9.3
AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor pote... 28 9.3
AF011368-1|AAB84386.1| 761|Homo sapiens CEV14 protein. 28 9.3
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 28 9.3
AC108146-1|AAY14794.1| 1146|Homo sapiens unknown protein. 28 9.3
>D50371-1|BAA23322.1| 69|Homo sapiens ATP synthase subunit e
protein.
Length = 69
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -2
Query: 313 PVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA 137
PV++SPLIK GR+S L +GV YGA N L + + R I A+EK +D + +E A
Sbjct: 4 PVQVSPLIKLGRYSALFLGVAYGATRYNYLKPRAEEERRIAAEEKKKQDELKRIARELA 62
>BT006922-1|AAP35568.1| 69|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit e
protein.
Length = 69
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -2
Query: 313 PVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA 137
PV++SPLIK GR+S L +GV YGA N L + + R I A+EK +D + +E A
Sbjct: 4 PVQVSPLIKLGRYSALFLGVAYGATRYNYLKPRAEEERRIAAEEKKKQDELKRIARELA 62
>BC105610-1|AAI05611.1| 69|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit E
protein.
Length = 69
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -2
Query: 313 PVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA 137
PV++SPLIK GR+S L +GV YGA N L + + R I A+EK +D + +E A
Sbjct: 4 PVQVSPLIKLGRYSALFLGVAYGATRYNYLKPRAEEERRIAAEEKKKQDELKRIARELA 62
>BC003679-1|AAH03679.1| 69|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit E
protein.
Length = 69
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -2
Query: 313 PVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA 137
PV++SPLIK GR+S L +GV YGA N L + + R I A+EK +D + +E A
Sbjct: 4 PVQVSPLIKLGRYSALFLGVAYGATRYNYLKPRAEEERRIAAEEKKKQDELKRIARELA 62
>M12529-1|AAB59518.1| 317|Homo sapiens apolipoprotein E protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 307 RISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASA 131
R+ PL++ GR TVG L G Q R +LR +E RD +L E KE+ +
Sbjct: 198 RLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRD-RLDEVKEQVAE 256
Query: 130 LEIKALEEMA 101
+ K LEE A
Sbjct: 257 VRAK-LEEQA 265
>M10065-1|AAB59397.1| 317|Homo sapiens apolipoprotein E protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 307 RISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASA 131
R+ PL++ GR TVG L G Q R +LR +E RD +L E KE+ +
Sbjct: 198 RLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRD-RLDEVKEQVAE 256
Query: 130 LEIKALEEMA 101
+ K LEE A
Sbjct: 257 VRAK-LEEQA 265
>K00396-1|AAB59546.1| 317|Homo sapiens preapolipoprotein E protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 307 RISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASA 131
R+ PL++ GR TVG L G Q R +LR +E RD +L E KE+ +
Sbjct: 198 RLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRD-RLDEVKEQVAE 256
Query: 130 LEIKALEEMA 101
+ K LEE A
Sbjct: 257 VRAK-LEEQA 265
>BC151242-1|AAI51243.1| 1983|Homo sapiens myosin, heavy chain 7B,
cardiac muscle, beta protein.
Length = 1983
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 LYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA-SALEIKALEE 107
L GA Q ++ + +A+ E+E + + R A+ + EK+RA +A E++ L E
Sbjct: 1148 LLGAQMQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEELSE 1197
>BC007808-1|AAH07808.1| 1006|Homo sapiens MYH7B protein protein.
Length = 1006
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 LYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA-SALEIKALEE 107
L GA Q ++ + +A+ E+E + + R A+ + EK+RA +A E++ L E
Sbjct: 171 LLGAQMQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEELSE 220
>BC003557-1|AAH03557.1| 317|Homo sapiens apolipoprotein E protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 307 RISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASA 131
R+ PL++ GR TVG L G Q R +LR +E RD +L E KE+ +
Sbjct: 198 RLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRD-RLDEVKEQVAE 256
Query: 130 LEIKALEEMA 101
+ K LEE A
Sbjct: 257 VRAK-LEEQA 265
>AL133324-2|CAI19310.2| 1983|Homo sapiens myosin, heavy chain 7B,
cardiac muscle, beta protein.
Length = 1983
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 LYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA-SALEIKALEE 107
L GA Q ++ + +A+ E+E + + R A+ + EK+RA +A E++ L E
Sbjct: 1148 LLGAQMQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEELSE 1197
>AL132825-6|CAI43047.2| 1983|Homo sapiens myosin, heavy chain 7B,
cardiac muscle, beta protein.
Length = 1983
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 LYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA-SALEIKALEE 107
L GA Q ++ + +A+ E+E + + R A+ + EK+RA +A E++ L E
Sbjct: 1148 LLGAQMQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEELSE 1197
>AF261279-1|AAG27089.1| 317|Homo sapiens apolipoprotein-E protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 307 RISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASA 131
R+ PL++ GR TVG L G Q R +LR +E RD +L E KE+ +
Sbjct: 198 RLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRD-RLDEVKEQVAE 256
Query: 130 LEIKALEEMA 101
+ K LEE A
Sbjct: 257 VRAK-LEEQA 265
>AF050154-3|AAD02505.1| 317|Homo sapiens apolipoprotein E protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 307 RISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASA 131
R+ PL++ GR TVG L G Q R +LR +E RD +L E KE+ +
Sbjct: 198 RLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRD-RLDEVKEQVAE 256
Query: 130 LEIKALEEMA 101
+ K LEE A
Sbjct: 257 VRAK-LEEQA 265
>AB040945-1|BAA96036.2| 2010|Homo sapiens KIAA1512 protein protein.
Length = 2010
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 LYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERA-SALEIKALEE 107
L GA Q ++ + +A+ E+E + + R A+ + EK+RA +A E++ L E
Sbjct: 1175 LLGAQMQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEELSE 1224
>D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein.
Length = 702
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 232 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
NR+ K+E R E K+K ++ AK KE+KE+ E
Sbjct: 202 NRIEKREVLKRRFEIKKK-LKTAKKKEKKEKKKKQE 236
>BC052279-1|AAH52279.1| 307|Homo sapiens leucine rich repeat
containing 59 protein.
Length = 307
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -2
Query: 220 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*K 77
K+EAK R EA+E+ +R + EEKER E AL+ KK K
Sbjct: 172 KREAKQRAKEAQERELRKREKAEEKERRRK-EYDALKAAKREQEKKPK 218
>BC017168-1|AAH17168.1| 307|Homo sapiens leucine rich repeat
containing 59 protein.
Length = 307
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -2
Query: 220 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*K 77
K+EAK R EA+E+ +R + EEKER E AL+ KK K
Sbjct: 172 KREAKQRAKEAQERELRKREKAEEKERRRK-EYDALKAAKREQEKKPK 218
>BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymerase
II complex component, homolog (S. cerevisiae) protein.
Length = 585
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 232 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
NR+ K+E R E K+K ++ AK KE+KE+ E
Sbjct: 85 NRIEKREVLKRRFEIKKK-LKTAKKKEKKEKKKKQE 119
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
++ ++K + +++ I+ +++ + K K+EKER +AL+ K LEE
Sbjct: 899 YEREVNKLKVQMKAIDDNQEMPPNKK-KKEKERCTALQDKLLEE 941
>BC063692-1|AAH63692.1| 398|Homo sapiens THOC2 protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
++ ++K + +++ I+ +++ + K K+EKER +AL+ K LEE
Sbjct: 139 YEREVNKLKVQMKAIDDNQEMPPNKK-KKEKERCTALQDKLLEE 181
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
++ ++K + +++ I+ +++ + K K+EKER +AL+ K LEE
Sbjct: 899 YEREVNKLKVQMKAIDDNQEMPPNKK-KKEKERCTALQDKLLEE 941
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
++ ++K + +++ I+ +++ + K K+EKER +AL+ K LEE
Sbjct: 899 YEREVNKLKVQMKAIDDNQEMPPNKK-KKEKERCTALQDKLLEE 941
>AK023659-1|BAB14630.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13597 fis, clone PLACE1009798, weakly similar to
RLR1 PROTEIN. ).
Length = 650
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
++ ++K + +++ I+ +++ + K K+EKER +AL+ K LEE
Sbjct: 272 YEREVNKLKVQMKAIDDNQEMPPNKK-KKEKERCTALQDKLLEE 314
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
++ ++K + +++ I+ +++ + K K+EKER +AL+ K LEE
Sbjct: 784 YEREVNKLKVQMKAIDDNQEMPPNKK-KKEKERCTALQDKLLEE 826
>X98260-1|CAA66913.1| 582|Homo sapiens M-phase phosphoprotein 11
protein.
Length = 582
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Frame = -2
Query: 223 SKKEAKLREIEAKEK-------VIRDAKLKEEKE-RASALEIKALEEMASGTAKK*KDKI 68
+K EAK +E EAKEK R AK KEE+E R AL K +++ KK + K+
Sbjct: 311 AKAEAKRKEQEAKEKQRQAELEAARLAKEKEEEEVRQQALLAKKEKDIQKKAIKKERQKL 370
>D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein.
Length = 2067
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -2
Query: 157 KEEKERASALEIKALEEMA 101
KE+KER SA E+++LEEM+
Sbjct: 35 KEKKERMSAAELRSLEEMS 53
>BC139751-1|AAI39752.1| 620|Homo sapiens ZRF1 protein protein.
Length = 620
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Frame = -2
Query: 223 SKKEAKLREIEAKEK-------VIRDAKLKEEKE-RASALEIKALEEMASGTAKK*KDKI 68
+K EAK +E EAKEK R AK KEE+E R AL K +++ KK + K+
Sbjct: 296 AKAEAKRKEQEAKEKQRQAELEAARLAKEKEEEEVRQQALLAKKEKDIQKKAIKKERQKL 355
>BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein.
Length = 2002
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -2
Query: 157 KEEKERASALEIKALEEMA 101
KE+KER SA E+++LEEM+
Sbjct: 22 KEKKERMSAAELRSLEEMS 40
>AJ417790-1|CAD10507.1| 1791|Homo sapiens voltage-gated sodium
channel protein.
Length = 1791
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = -2
Query: 199 EIEAKEKVIRDAK--LKEEKERASALEI 122
EIEAKEK+ ++A+ LKEEKE A+ I
Sbjct: 413 EIEAKEKMFQEAQQLLKEEKEALVAMGI 440
>AF188679-1|AAF17480.1| 1791|Homo sapiens voltage-gated sodium
channel type XI alpha subunit protein.
Length = 1791
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = -2
Query: 199 EIEAKEKVIRDAK--LKEEKERASALEI 122
EIEAKEK+ ++A+ LKEEKE A+ I
Sbjct: 413 EIEAKEKMFQEAQQLLKEEKEALVAMGI 440
>AF150882-1|AAF24980.1| 1444|Homo sapiens voltage-gated sodium
channel alpha subunit, alternate splice variant SCN12A-s
protein.
Length = 1444
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = -2
Query: 199 EIEAKEKVIRDAK--LKEEKERASALEI 122
EIEAKEK+ ++A+ LKEEKE A+ I
Sbjct: 413 EIEAKEKMFQEAQQLLKEEKEALVAMGI 440
>AF109737-1|AAF24976.1| 1791|Homo sapiens voltage-gated sodium
channel alpha subunit SCN12A protein.
Length = 1791
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = -2
Query: 199 EIEAKEKVIRDAK--LKEEKERASALEI 122
EIEAKEK+ ++A+ LKEEKE A+ I
Sbjct: 413 EIEAKEKMFQEAQQLLKEEKEALVAMGI 440
>AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant 1
protein.
Length = 2046
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -2
Query: 157 KEEKERASALEIKALEEMA 101
KE+KER SA E+++LEEM+
Sbjct: 14 KEKKERMSAAELRSLEEMS 32
>X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein.
Length = 296
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 83 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 121
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 195 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 233
>M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human
ribonucleoprotein (La) mRNA, 3' end. ).
Length = 355
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 142 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 180
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 195 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 233
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 195 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 233
>BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>BC107891-1|AAI07892.1| 291|Homo sapiens SMC2 protein protein.
Length = 291
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>BC071750-1|AAH71750.1| 356|Homo sapiens SMC2 protein protein.
Length = 356
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>BC055081-1|AAH55081.1| 209|Homo sapiens SMC2 protein protein.
Length = 209
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 37 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 82
>BC032705-1|AAH32705.1| 781|Homo sapiens SMC2 protein protein.
Length = 781
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation
initiation factor 5B protein.
Length = 1220
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
RL + EAK +E E E+ R+ K ++EKER L+
Sbjct: 368 RLEELEAKRKEEERLEQEKRERKKQKEKERKERLK 402
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 195 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 233
>BC017845-1|AAH17845.1| 289|Homo sapiens Unknown (protein for
IMAGE:4699860) protein.
Length = 289
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>BC003396-1|AAH03396.1| 289|Homo sapiens Unknown (protein for
IMAGE:3448562) protein.
Length = 289
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 195 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 233
>AY739716-1|AAW65985.1| 760|Homo sapiens chromosome-associated
protein E protein.
Length = 760
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>AL161791-2|CAI16867.1| 145|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 145
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 37 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 82
>AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein
protein.
Length = 1132
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
RL + EAK +E E E+ R+ K ++EKER L+
Sbjct: 280 RLEELEAKRKEEERLEQEKRERKKQKEKERKERLK 314
>AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.
Length = 1220
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
RL + EAK +E E E+ R+ K ++EKER L+
Sbjct: 368 RLEELEAKRKEEERLEQEKRERKKQKEKERKERLK 402
>AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated
protein-E protein.
Length = 1197
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEA-KEKVIRDAKLKEEKERASALEI-KALEEM 104
Q + KKEAKL+EI+ E+ I K ++ER+S LE K + E+
Sbjct: 182 QKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREI 227
>AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation
factor IF2 protein.
Length = 1220
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
RL + EAK +E E E+ R+ K ++EKER L+
Sbjct: 368 RLEELEAKRKEEERLEQEKRERKKQKEKERKERLK 402
>AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
RL + EAK +E E E+ R+ K ++EKER L+
Sbjct: 368 RLEELEAKRKEEERLEQEKRERKKQKEKERKERLK 402
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 235 QNRLSKKEAKLR---EIEAKEKVIRDAKLKEEKERASAL 128
+ + +K EAKLR E EAK+K+ DA++K +E+ L
Sbjct: 195 ERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCL 233
>AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.
Length = 1222
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 125
RL + EAK +E E E+ R+ K ++EKER L+
Sbjct: 370 RLEELEAKRKEEERLEQEKRERKKQKEKERKERLK 404
>Z97832-4|CAI20190.1| 631|Homo sapiens differentially expressed in
FDCP 6 homolog (mouse) protein.
Length = 631
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIE-AKEKVIRDAKLKEEKERASALEIKALEEM 104
H+ E +LRE E A+ + + +LKEE+ IK LEEM
Sbjct: 389 HRELQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKELEEM 434
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
+ +RLS A E+E KE D+++K+ KE+ L+ K L+E
Sbjct: 1369 NNHRLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQ-KLLKE 1411
>X82835-1|CAA58042.1| 1977|Homo sapiens sodium channel alpha subunit
protein.
Length = 1977
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 110
QN+ + +EAK +E+E ++ + R LK+E+E A A+ A E
Sbjct: 408 QNQANIEEAKQKELEFQQMLDR---LKKEQEEAEAIAAAAAE 446
>U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor-I
p150 subunit protein.
Length = 938
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 217 KEAKLREIEAKEKVIRDAKLKEEKERASALEIK 119
K+ K E E KEK R+ + K+EKE+A +K
Sbjct: 354 KKKKEEEKELKEKERREKREKDEKEKAEKQRLK 386
>U18985-1|AAA75315.1| 729|Homo sapiens triadin protein.
Length = 729
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 244 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-ALEEMASGTAKK*KD 74
A H+ ++ KKE + AKE+ + AK E+ E + E+K +E TA K K+
Sbjct: 184 ATHKEKIEKKEKPETKTVAKEQ--KKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKE 239
>DQ857292-1|ABI51981.1| 1977|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 1977
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 110
QN+ + +EAK +E+E ++ + R LK+E+E A A+ A E
Sbjct: 408 QNQANIEEAKQKELEFQQMLDR---LKKEQEEAEAIAAAAAE 446
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
+ +RLS A E+E KE D+++K+ KE+ L+ K L+E
Sbjct: 1084 NNHRLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQ-KLLKE 1126
>BC139910-1|AAI39911.1| 297|Homo sapiens TRDN protein protein.
Length = 297
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 244 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-ALEEMASGTAKK*KD 74
A H+ ++ KKE + AKE+ + AK E+ E + E+K +E TA K K+
Sbjct: 184 ATHKEKIEKKEKPETKTVAKEQ--KKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKE 239
>BC128185-1|AAI28186.1| 862|Homo sapiens transient receptor
potential cation channel, subfamily C, member 7 protein.
Length = 862
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 86
RL K+ +++ + + + +LKE K+ S+L + LEE + T +
Sbjct: 786 RLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGE 833
>BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor
potential cation channel, subfamily C, member 6 protein.
Length = 931
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 92
RL K+ +I+ + + + +LKE K+ S+L + LEE + T
Sbjct: 861 RLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNT 906
>BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor
potential cation channel, subfamily C, member 6 protein.
Length = 931
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 92
RL K+ +I+ + + + +LKE K+ S+L + LEE + T
Sbjct: 861 RLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNT 906
>BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly factor
1, subunit A (p150) protein.
Length = 956
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 217 KEAKLREIEAKEKVIRDAKLKEEKERASALEIK 119
K+ K E E KEK R+ + K+EKE+A +K
Sbjct: 372 KKKKEEEKELKEKERREKREKDEKEKAEKQRLK 404
>BC057222-1|AAH57222.1| 344|Homo sapiens TRDN protein protein.
Length = 344
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 244 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-ALEEMASGTAKK*KD 74
A H+ ++ KKE + AKE+ + AK E+ E + E+K +E TA K K+
Sbjct: 184 ATHKEKIEKKEKPETKTVAKEQ--KKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKE 239
>BC052620-1|AAH52620.1| 411|Homo sapiens CHAF1A protein protein.
Length = 411
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 217 KEAKLREIEAKEKVIRDAKLKEEKERASALEIK 119
K+ K E E KEK R+ + K+EKE+A +K
Sbjct: 354 KKKKEEEKELKEKERREKREKDEKEKAEKQRLK 386
>BC029393-1|AAH29393.1| 345|Homo sapiens TRDN protein protein.
Length = 345
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 244 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-ALEEMASGTAKK*KD 74
A H+ ++ KKE + AKE+ + AK E+ E + E+K +E TA K K+
Sbjct: 184 ATHKEKIEKKEKPETKTVAKEQ--KKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKE 239
>AY682086-1|AAT85835.1| 539|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 539
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 110
QN+ + +EAK +E+E ++ + R LK+E+E A A+ A E
Sbjct: 273 QNQANIEEAKQKELEFQQMLDR---LKKEQEEAEAIAAAAAE 311
>AY682084-1|AAT85833.1| 528|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 528
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 110
QN+ + +EAK +E+E ++ + R LK+E+E A A+ A E
Sbjct: 273 QNQANIEEAKQKELEFQQMLDR---LKKEQEEAEAIAAAAAE 311
>AY241694-1|AAO91767.1| 631|Homo sapiens IRF4-binding protein
protein.
Length = 631
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIE-AKEKVIRDAKLKEEKERASALEIKALEEM 104
H+ E +LRE E A+ + + +LKEE+ IK LEEM
Sbjct: 389 HRELQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKELEEM 434
>AY167927-1|AAO12125.1| 746|Homo sapiens transient receptor
potential channel 7 gamma splice variant protein.
Length = 746
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 86
RL K+ +++ + + + +LKE K+ S+L + LEE + T +
Sbjct: 670 RLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGE 717
>AY167926-1|AAO12124.1| 806|Homo sapiens transient receptor
potential channel 7 beta splice variant protein.
Length = 806
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 86
RL K+ +++ + + + +LKE K+ S+L + LEE + T +
Sbjct: 730 RLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGE 777
>AJ549089-1|CAD70162.1| 807|Homo sapiens transient receptor
potential channel 7 protein.
Length = 807
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 86
RL K+ +++ + + + +LKE K+ S+L + LEE + T +
Sbjct: 731 RLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGE 778
>AJ549088-1|CAD70161.1| 801|Homo sapiens transient receptor
potential channel 7 protein.
Length = 801
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 86
RL K+ +++ + + + +LKE K+ S+L + LEE + T +
Sbjct: 725 RLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGE 772
>AJ489257-1|CAD33526.2| 461|Homo sapiens triadin protein.
Length = 461
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 244 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-ALEEMASGTAKK*KD 74
A H+ ++ KKE + AKE+ + AK E+ E + E+K +E TA K K+
Sbjct: 184 ATHKEKIEKKEKPETKTVAKEQ--KKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKE 239
>AJ421783-1|CAD19069.1| 862|Homo sapiens short transient receptor
potential channel 7 protein.
Length = 862
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 86
RL K+ +++ + + + +LKE K+ S+L + LEE + T +
Sbjct: 786 RLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGE 833
>AJ276095-1|CAC08450.1| 631|Homo sapiens Def-6 protein protein.
Length = 631
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIE-AKEKVIRDAKLKEEKERASALEIKALEEM 104
H+ E +LRE E A+ + + +LKEE+ IK LEEM
Sbjct: 389 HRELQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKELEEM 434
>AJ272034-1|CAC03489.1| 862|Homo sapiens putative capacitative
calcium channel protein.
Length = 862
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 86
RL K+ +++ + + + +LKE K+ S+L + LEE + T +
Sbjct: 786 RLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGE 833
>AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor
potential channel 6, variant delta377-431 protein.
Length = 876
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 92
RL K+ +I+ + + + +LKE K+ S+L + LEE + T
Sbjct: 806 RLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNT 851
>AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor
potential channel 6, variant delta316-431 protein.
Length = 815
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 92
RL K+ +I+ + + + +LKE K+ S+L + LEE + T
Sbjct: 745 RLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNT 790
>AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor
potential channel 6 protein.
Length = 931
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 92
RL K+ +I+ + + + +LKE K+ S+L + LEE + T
Sbjct: 861 RLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNT 906
>AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor
potential protein protein.
Length = 931
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 92
RL K+ +I+ + + + +LKE K+ S+L + LEE + T
Sbjct: 861 RLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNT 906
>AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly
factor-I p150 subunit protein.
Length = 938
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 217 KEAKLREIEAKEKVIRDAKLKEEKERASALEIK 119
K+ K E E KEK R+ + K+EKE+A +K
Sbjct: 354 KKKKEEEKELKEKERREKREKDEKEKAEKQRLK 386
>AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor
potential protein 6 protein.
Length = 931
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 229 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 92
RL K+ +I+ + + + +LKE K+ S+L + LEE + T
Sbjct: 861 RLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNT 906
>AF011368-1|AAB84386.1| 761|Homo sapiens CEV14 protein.
Length = 761
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
+ +RLS A E+E KE D+++K+ KE+ L+ K L+E
Sbjct: 182 NNHRLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQ-KLLKE 224
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 238 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 107
+ +RLS A E+E KE D+++K+ KE+ L+ K L+E
Sbjct: 1369 NNHRLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQ-KLLKE 1411
>AC108146-1|AAY14794.1| 1146|Homo sapiens unknown protein.
Length = 1146
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -2
Query: 235 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 110
QN+ + +EAK +E+E ++ + R LK+E+E A A+ A E
Sbjct: 408 QNQANIEEAKQKELEFQQMLDR---LKKEQEEAEAIAAAAAE 446
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,382,889
Number of Sequences: 237096
Number of extensions: 743728
Number of successful extensions: 2798
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 2572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2796
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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