Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16m16
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15353-1|AAC13647.1| 217|Homo sapiens cap-binding protein protein. 107 4e-23
BC107715-1|AAI07716.1| 217|Homo sapiens eukaryotic translation ... 107 4e-23
BC043226-1|AAH43226.1| 217|Homo sapiens eukaryotic translation ... 107 4e-23
BC035166-1|AAH35166.1| 217|Homo sapiens eukaryotic translation ... 107 4e-23
BC012611-1|AAH12611.1| 217|Homo sapiens eukaryotic translation ... 105 2e-22
AB209519-1|BAD92756.1| 243|Homo sapiens eukaryotic translation ... 55 3e-07
BC021690-1|AAH21690.1| 245|Homo sapiens eukaryotic translation ... 52 2e-06
BC021226-1|AAH21226.1| 245|Homo sapiens eukaryotic translation ... 52 2e-06
BC005874-1|AAH05874.1| 245|Homo sapiens eukaryotic translation ... 52 2e-06
BC005392-1|AAH05392.1| 245|Homo sapiens eukaryotic translation ... 52 2e-06
AF068117-1|AAC19374.1| 245|Homo sapiens eIF4E-like protein 4E-L... 52 2e-06
AF047695-1|AAC18565.1| 245|Homo sapiens cap-binding protein 4EH... 52 2e-06
AC092165-5|AAY24105.1| 245|Homo sapiens unknown protein. 52 2e-06
BC068443-1|AAH68443.1| 118|Homo sapiens eukaryotic translation ... 34 0.63
BC031289-1|AAH31289.3| 118|Homo sapiens eukaryotic translation ... 34 0.63
>M15353-1|AAC13647.1| 217|Homo sapiens cap-binding protein protein.
Length = 217
Score = 107 bits (257), Expect = 4e-23
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = -3
Query: 751 QRFTDLDRFWLDVVLLLIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIG 575
QR +DLDRFWL+ +L LIGE+F++ SD++CGAVVNVR K DKIAIWT + + A IG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
Query: 574 KKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 470
+ KE+LG+ K IG+Q H DT K S TKN + V
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
>BC107715-1|AAI07716.1| 217|Homo sapiens eukaryotic translation
initiation factor 4E protein.
Length = 217
Score = 107 bits (257), Expect = 4e-23
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = -3
Query: 751 QRFTDLDRFWLDVVLLLIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIG 575
QR +DLDRFWL+ +L LIGE+F++ SD++CGAVVNVR K DKIAIWT + + A IG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
Query: 574 KKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 470
+ KE+LG+ K IG+Q H DT K S TKN + V
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
>BC043226-1|AAH43226.1| 217|Homo sapiens eukaryotic translation
initiation factor 4E protein.
Length = 217
Score = 107 bits (257), Expect = 4e-23
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = -3
Query: 751 QRFTDLDRFWLDVVLLLIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIG 575
QR +DLDRFWL+ +L LIGE+F++ SD++CGAVVNVR K DKIAIWT + + A IG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
Query: 574 KKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 470
+ KE+LG+ K IG+Q H DT K S TKN + V
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
>BC035166-1|AAH35166.1| 217|Homo sapiens eukaryotic translation
initiation factor 4E protein.
Length = 217
Score = 107 bits (257), Expect = 4e-23
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = -3
Query: 751 QRFTDLDRFWLDVVLLLIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIG 575
QR +DLDRFWL+ +L LIGE+F++ SD++CGAVVNVR K DKIAIWT + + A IG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
Query: 574 KKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 470
+ KE+LG+ K IG+Q H DT K S TKN + V
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
>BC012611-1|AAH12611.1| 217|Homo sapiens eukaryotic translation
initiation factor 4E protein.
Length = 217
Score = 105 bits (252), Expect = 2e-22
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = -3
Query: 751 QRFTDLDRFWLDVVLLLIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIG 575
QR +DL+RFWL+ +L LIGE+F++ SD++CGAVVNVR K DKIAIWT + + A IG
Sbjct: 121 QRRSDLNRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
Query: 574 KKLKEQLGIHGK--IGFQVHRDTMVKHSSATKNLYTV 470
+ KE+LG+ K IG+Q H DT K S TKN + V
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
>AB209519-1|BAD92756.1| 243|Homo sapiens eukaryotic translation
initiation factor 4E member 2 variant protein.
Length = 243
Score = 54.8 bits (126), Expect = 3e-07
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 155 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 214
Query: 550 I--HGKIGFQVHRDTMVKHSSATKN 482
+ + + ++ H D+ +K +S+ +N
Sbjct: 215 LPPNTIMEYKTHTDS-IKDNSSFRN 238
>BC021690-1|AAH21690.1| 245|Homo sapiens eukaryotic translation
initiation factor 4E family member 2 protein.
Length = 245
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 146 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
Query: 550 I--HGKIGFQVHRDTM 509
+ + + ++ H D++
Sbjct: 206 LPPNTIMEYKTHTDSI 221
>BC021226-1|AAH21226.1| 245|Homo sapiens eukaryotic translation
initiation factor 4E family member 2 protein.
Length = 245
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 146 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
Query: 550 I--HGKIGFQVHRDTM 509
+ + + ++ H D++
Sbjct: 206 LPPNTIMEYKTHTDSI 221
>BC005874-1|AAH05874.1| 245|Homo sapiens eukaryotic translation
initiation factor 4E family member 2 protein.
Length = 245
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 146 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
Query: 550 I--HGKIGFQVHRDTM 509
+ + + ++ H D++
Sbjct: 206 LPPNTIMEYKTHTDSI 221
>BC005392-1|AAH05392.1| 245|Homo sapiens eukaryotic translation
initiation factor 4E family member 2 protein.
Length = 245
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 146 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
Query: 550 I--HGKIGFQVHRDTM 509
+ + + ++ H D++
Sbjct: 206 LPPNTIMEYKTHTDSI 221
>AF068117-1|AAC19374.1| 245|Homo sapiens eIF4E-like protein 4E-LP
protein.
Length = 245
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 146 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
Query: 550 I--HGKIGFQVHRDTM 509
+ + + ++ H D++
Sbjct: 206 LPPNTIMEYKTHTDSI 221
>AF047695-1|AAC18565.1| 245|Homo sapiens cap-binding protein 4EHP
protein.
Length = 245
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 146 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
Query: 550 I--HGKIGFQVHRDTM 509
+ + + ++ H D++
Sbjct: 206 LPPNTIMEYKTHTDSI 221
>AC092165-5|AAY24105.1| 245|Homo sapiens unknown protein.
Length = 245
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 730 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 551
R W +++L ++GE F +EICGAVV+VR + D I+IW A Q T I L+ L
Sbjct: 146 RCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
Query: 550 I--HGKIGFQVHRDTM 509
+ + + ++ H D++
Sbjct: 206 LPPNTIMEYKTHTDSI 221
>BC068443-1|AAH68443.1| 118|Homo sapiens eukaryotic translation
initiation factor 4E family member 3 protein.
Length = 118
Score = 33.9 bits (74), Expect = 0.63
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -3
Query: 724 WLDVVLLLIGENFEN----SDEICGAVVNVRPKVDKIAIWTADA 605
W +++L IGE F + DE+ G V+VR + D + +W +A
Sbjct: 33 WKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNA 76
>BC031289-1|AAH31289.3| 118|Homo sapiens eukaryotic translation
initiation factor 4E family member 3 protein.
Length = 118
Score = 33.9 bits (74), Expect = 0.63
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -3
Query: 724 WLDVVLLLIGENFEN----SDEICGAVVNVRPKVDKIAIWTADA 605
W +++L IGE F + DE+ G V+VR + D + +W +A
Sbjct: 33 WKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNA 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,058,258
Number of Sequences: 237096
Number of extensions: 1626043
Number of successful extensions: 2406
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2396
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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