Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16m07
(867 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005288-1|AAH05288.1| 260|Homo sapiens TGF beta-inducible nucl... 380 e-105
AY443419-1|AAS00024.1| 260|Homo sapiens TGF-beta inducible nucl... 380 e-105
AJ012409-1|CAA10008.1| 260|Homo sapiens hypothetical protein pr... 380 e-105
AF372458-1|AAK53761.1| 260|Homo sapiens hairy cell leukemia pro... 380 e-105
AF077615-1|AAG43048.1| 260|Homo sapiens TGF beta inducible nucl... 380 e-105
BC101721-1|AAI01722.1| 864|Homo sapiens NMDA receptor regulated... 35 0.44
BC101719-1|AAI01720.1| 864|Homo sapiens NMDA receptor regulated... 35 0.44
BC028112-1|AAH28112.1| 335|Homo sapiens NARG1L protein protein. 35 0.44
AL731858-4|CAH73370.1| 864|Homo sapiens NMDA receptor regulated... 35 0.44
AL590665-1|CAH71511.1| 864|Homo sapiens NMDA receptor regulated... 35 0.44
AL354696-8|CAI16619.1| 864|Homo sapiens NMDA receptor regulated... 35 0.44
AK025707-1|BAB15222.1| 270|Homo sapiens protein ( Homo sapiens ... 35 0.44
BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J pr... 33 1.8
BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J pr... 33 1.8
BC113111-1|AAI13112.1| 1136|Homo sapiens CENPJ protein protein. 33 1.8
BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J pr... 33 1.8
AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J pr... 33 1.8
AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associ... 33 1.8
M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyt... 31 7.2
L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein. 31 7.2
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 31 7.2
BC110497-1|AAI10498.1| 695|Homo sapiens splicing factor, argini... 31 7.2
BC110496-1|AAI10497.1| 695|Homo sapiens splicing factor, argini... 31 7.2
AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open... 31 7.2
>BC005288-1|AAH05288.1| 260|Homo sapiens TGF beta-inducible nuclear
protein 1 protein.
Length = 260
Score = 380 bits (935), Expect = e-105
Identities = 175/224 (78%), Positives = 201/224 (89%), Gaps = 1/224 (0%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQ-NTEKVAEGALPVYLLDRDVQ 652
K+ K+ G+KAK+++K+R EKIQMKK IK HE++N KQ N EK +GA+P YLLDR+ Q
Sbjct: 37 KKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQ 96
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFV 472
SRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTKV FV
Sbjct: 97 SRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFV 156
Query: 471 GENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITK 292
G+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LGVITK
Sbjct: 157 GDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITK 216
Query: 291 GTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 160
GTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 217 GTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260
>AY443419-1|AAS00024.1| 260|Homo sapiens TGF-beta inducible nuclear
protein protein.
Length = 260
Score = 380 bits (935), Expect = e-105
Identities = 175/224 (78%), Positives = 201/224 (89%), Gaps = 1/224 (0%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQ-NTEKVAEGALPVYLLDRDVQ 652
K+ K+ G+KAK+++K+R EKIQMKK IK HE++N KQ N EK +GA+P YLLDR+ Q
Sbjct: 37 KKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQ 96
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFV 472
SRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTKV FV
Sbjct: 97 SRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFV 156
Query: 471 GENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITK 292
G+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LGVITK
Sbjct: 157 GDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITK 216
Query: 291 GTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 160
GTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 217 GTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260
>AJ012409-1|CAA10008.1| 260|Homo sapiens hypothetical protein
protein.
Length = 260
Score = 380 bits (935), Expect = e-105
Identities = 175/224 (78%), Positives = 201/224 (89%), Gaps = 1/224 (0%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQ-NTEKVAEGALPVYLLDRDVQ 652
K+ K+ G+KAK+++K+R EKIQMKK IK HE++N KQ N EK +GA+P YLLDR+ Q
Sbjct: 37 KKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQ 96
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFV 472
SRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTKV FV
Sbjct: 97 SRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFV 156
Query: 471 GENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITK 292
G+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LGVITK
Sbjct: 157 GDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITK 216
Query: 291 GTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 160
GTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 217 GTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260
>AF372458-1|AAK53761.1| 260|Homo sapiens hairy cell leukemia
protein 1 protein.
Length = 260
Score = 380 bits (935), Expect = e-105
Identities = 175/224 (78%), Positives = 201/224 (89%), Gaps = 1/224 (0%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQ-NTEKVAEGALPVYLLDRDVQ 652
K+ K+ G+KAK+++K+R EKIQMKK IK HE++N KQ N EK +GA+P YLLDR+ Q
Sbjct: 37 KKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQ 96
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFV 472
SRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTKV FV
Sbjct: 97 SRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFV 156
Query: 471 GENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITK 292
G+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LGVITK
Sbjct: 157 GDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITK 216
Query: 291 GTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 160
GTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 217 GTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260
>AF077615-1|AAG43048.1| 260|Homo sapiens TGF beta inducible nuclear
protein TINP1 protein.
Length = 260
Score = 380 bits (935), Expect = e-105
Identities = 175/224 (78%), Positives = 201/224 (89%), Gaps = 1/224 (0%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQ-NTEKVAEGALPVYLLDRDVQ 652
K+ K+ G+KAK+++K+R EKIQMKK IK HE++N KQ N EK +GA+P YLLDR+ Q
Sbjct: 37 KKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQ 96
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFV 472
SRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTKV FV
Sbjct: 97 SRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFV 156
Query: 471 GENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITK 292
G+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LGVITK
Sbjct: 157 GDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITK 216
Query: 291 GTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 160
GTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 217 GTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260
>BC101721-1|AAI01722.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -1
Query: 852 LVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNT---EKVAEGAL 682
L+ ++ + L I +K+ ++E +KI +KK +++ E +K+N + + GA
Sbjct: 712 LIRFSKSVSNHSNLPDIVSKVLSQEM--QKIFVKKDLESFNEDFLKRNATSLQHLLSGAK 769
Query: 681 PVYLLDRDVQSRAKVLSNMIKQKRKEK 601
+Y LD+ Q +A ++ + + K+K
Sbjct: 770 MMYFLDKSRQEKAIAIATRLDETIKDK 796
>BC101719-1|AAI01720.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -1
Query: 852 LVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNT---EKVAEGAL 682
L+ ++ + L I +K+ ++E +KI +KK +++ E +K+N + + GA
Sbjct: 712 LIRFSKSVSNHSNLPDIVSKVLSQEM--QKIFVKKDLESFNEDFLKRNATSLQHLLSGAK 769
Query: 681 PVYLLDRDVQSRAKVLSNMIKQKRKEK 601
+Y LD+ Q +A ++ + + K+K
Sbjct: 770 MMYFLDKSRQEKAIAIATRLDETIKDK 796
>BC028112-1|AAH28112.1| 335|Homo sapiens NARG1L protein protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -1
Query: 852 LVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNT---EKVAEGAL 682
L+ ++ + L I +K+ ++E +KI +KK +++ E +K+N + + GA
Sbjct: 183 LIRFSKSVSNHSNLPDIVSKVLSQEM--QKIFVKKDLESFNEDFLKRNATSLQHLLSGAK 240
Query: 681 PVYLLDRDVQSRAKVLSNMIKQKRKEK 601
+Y LD+ Q +A ++ + + K+K
Sbjct: 241 MMYFLDKSRQEKAIAIATRLDETIKDK 267
>AL731858-4|CAH73370.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -1
Query: 852 LVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNT---EKVAEGAL 682
L+ ++ + L I +K+ ++E +KI +KK +++ E +K+N + + GA
Sbjct: 712 LIRFSKSVSNHSNLPDIVSKVLSQEM--QKIFVKKDLESFNEDFLKRNATSLQHLLSGAK 769
Query: 681 PVYLLDRDVQSRAKVLSNMIKQKRKEK 601
+Y LD+ Q +A ++ + + K+K
Sbjct: 770 MMYFLDKSRQEKAIAIATRLDETIKDK 796
>AL590665-1|CAH71511.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -1
Query: 852 LVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNT---EKVAEGAL 682
L+ ++ + L I +K+ ++E +KI +KK +++ E +K+N + + GA
Sbjct: 712 LIRFSKSVSNHSNLPDIVSKVLSQEM--QKIFVKKDLESFNEDFLKRNATSLQHLLSGAK 769
Query: 681 PVYLLDRDVQSRAKVLSNMIKQKRKEK 601
+Y LD+ Q +A ++ + + K+K
Sbjct: 770 MMYFLDKSRQEKAIAIATRLDETIKDK 796
>AL354696-8|CAI16619.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -1
Query: 852 LVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNT---EKVAEGAL 682
L+ ++ + L I +K+ ++E +KI +KK +++ E +K+N + + GA
Sbjct: 712 LIRFSKSVSNHSNLPDIVSKVLSQEM--QKIFVKKDLESFNEDFLKRNATSLQHLLSGAK 769
Query: 681 PVYLLDRDVQSRAKVLSNMIKQKRKEK 601
+Y LD+ Q +A ++ + + K+K
Sbjct: 770 MMYFLDKSRQEKAIAIATRLDETIKDK 796
>AK025707-1|BAB15222.1| 270|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22054 fis, clone HEP09634. ).
Length = 270
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -1
Query: 852 LVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNT---EKVAEGAL 682
L+ ++ + L I +K+ ++E +KI +KK +++ E +K+N + + GA
Sbjct: 118 LIRFSKSVSNHSNLPDIVSKVLSQEM--QKIFVKKDLESFNEDFLKRNATSLQHLLSGAK 175
Query: 681 PVYLLDRDVQSRAKVLSNMIKQKRKEK 601
+Y LD+ Q +A ++ + + K+K
Sbjct: 176 MMYFLDKSRQEKAIAIATRLDETIKDK 202
>BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -1
Query: 810 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRD-VQSRAKVL 634
R IKA I +++ E ++++I+ EE+ +KQ K AEG LP+ + R + L
Sbjct: 325 RPIKAAIGERKQTFEDY-LEEQIQL-EEQELKQKQLKEAEGPLPIKAKPKQPFLKRGEGL 382
Query: 633 SNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
+ K K + GK + D +FK+ + ++ A K
Sbjct: 383 ARFTNAKSKFQKGKESKLVTNQSTSEDQPLFKMDRQQLQRKTALK 427
>BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -1
Query: 810 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRD-VQSRAKVL 634
R IKA I +++ E ++++I+ EE+ +KQ K AEG LP+ + R + L
Sbjct: 325 RPIKAAIGERKQTFEDY-LEEQIQL-EEQELKQKQLKEAEGPLPIKAKPKQPFLKRGEGL 382
Query: 633 SNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
+ K K + GK + D +FK+ + ++ A K
Sbjct: 383 ARFTNAKSKFQKGKESKLVTNQSTSEDQPLFKMDRQQLQRKTALK 427
>BC113111-1|AAI13112.1| 1136|Homo sapiens CENPJ protein protein.
Length = 1136
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -1
Query: 810 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRD-VQSRAKVL 634
R IKA I +++ E ++++I+ EE+ +KQ K AEG LP+ + R + L
Sbjct: 325 RPIKAAIGERKQTFEDY-LEEQIQL-EEQELKQKQLKEAEGPLPIKAKPKQPFLKRGEGL 382
Query: 633 SNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
+ K K + GK + D +FK+ + ++ A K
Sbjct: 383 ARFTNAKSKFQKGKESKLVTNQSTSEDQPLFKMDRQQLQRKTALK 427
>BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -1
Query: 810 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRD-VQSRAKVL 634
R IKA I +++ E ++++I+ EE+ +KQ K AEG LP+ + R + L
Sbjct: 325 RPIKAAIGERKQTFEDY-LEEQIQL-EEQELKQKQLKEAEGPLPIKAKPKQPFLKRGEGL 382
Query: 633 SNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
+ K K + GK + D +FK+ + ++ A K
Sbjct: 383 ARFTNAKSKFQKGKESKLVTNQSTSEDQPLFKMDRQQLQRKTALK 427
>AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -1
Query: 810 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRD-VQSRAKVL 634
R IKA I +++ E ++++I+ EE+ +KQ K AEG LP+ + R + L
Sbjct: 325 RPIKAAIGERKQTFEDY-LEEQIQL-EEQELKQKQLKEAEGPLPIKAKPKQPFLKRGEGL 382
Query: 633 SNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
+ K K + GK + D +FK+ + ++ A K
Sbjct: 383 ARFTNAKSKFQKGKESKLVTNQSTSEDQPLFKMDRQQLQRKTALK 427
>AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal
P4.1-associated protein protein.
Length = 1338
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -1
Query: 810 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRD-VQSRAKVL 634
R IKA I +++ E ++++I+ EE+ +KQ K AEG LP+ + R + L
Sbjct: 325 RPIKAAIGERKQTFEDY-LEEQIQL-EEQELKQKQLKEAEGPLPIKAKPKQPFLKRGEGL 382
Query: 633 SNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
+ K K + GK + D +FK+ + ++ A K
Sbjct: 383 ARFTNAKSKFQKGKESKLVTNQSTSEDQPLFKMDRQQLQRKTALK 427
>M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyte
surface protein exons 1-5, complete cds. ).
Length = 550
Score = 30.7 bits (66), Expect = 7.2
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKE-RRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQ 652
KR KLR + K ++E RRN+K +K++A E+K ++ EK+ + L R++Q
Sbjct: 317 KREEKLRKREQKQRDRELRRNQK--KLEKLQAEEQKQLQ---EKIKLEERKLLLAQRNLQ 371
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAE 547
S ++++ ++ + + K + + K+R Q E
Sbjct: 372 S-IRLIAELLSRAKAVKLREQEQKEEKLRLQQQEE 405
>L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein.
Length = 695
Score = 30.7 bits (66), Expect = 7.2
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKE-RRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQ 652
KR KLR + K ++E RRN+K +K++A E+K ++ EK+ + L R++Q
Sbjct: 317 KREEKLRKREQKQRDRELRRNQK--KLEKLQAEEQKQLQ---EKIKLEERKLLLAQRNLQ 371
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAE 547
S ++++ ++ + + K + + K+R Q E
Sbjct: 372 S-IRLIAELLSRAKAVKLREQEQKEEKLRLQQQEE 405
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = -1
Query: 792 IFNKERRNEKIQMKKKIKAHEEKNVKQN-TEKVAE---GALPVYLLDRDVQSRAKVLSNM 625
++++E+ K++++ + + QN T K+ E PV L D D+++R +
Sbjct: 155 VYSREQYTGKLRVRSHSLSPTHREDGQNITPKICEVYSKKSPVSLDDSDIEARLNSWNLG 214
Query: 624 IKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPP 445
+ K K K+ K++ + DA+V K+L+ ++ + K + E RK
Sbjct: 215 LDMKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYRSKQHETEETIRKLE 274
Query: 444 K 442
K
Sbjct: 275 K 275
>BC110497-1|AAI10498.1| 695|Homo sapiens splicing factor,
arginine/serine-rich 17A protein.
Length = 695
Score = 30.7 bits (66), Expect = 7.2
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKE-RRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQ 652
KR KLR + K ++E RRN+K +K++A E+K ++ EK+ + L R++Q
Sbjct: 317 KREEKLRKREQKQRDRELRRNQK--KLEKLQAEEQKQLQ---EKIKLEERKLLLAQRNLQ 371
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAE 547
S ++++ ++ + + K + + K+R Q E
Sbjct: 372 S-IRLIAELLSRAKAVKLREQEQKEEKLRLQQQEE 405
>BC110496-1|AAI10497.1| 695|Homo sapiens splicing factor,
arginine/serine-rich 17A protein.
Length = 695
Score = 30.7 bits (66), Expect = 7.2
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKE-RRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQ 652
KR KLR + K ++E RRN+K +K++A E+K ++ EK+ + L R++Q
Sbjct: 317 KREEKLRKREQKQRDRELRRNQK--KLEKLQAEEQKQLQ---EKIKLEERKLLLAQRNLQ 371
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAE 547
S ++++ ++ + + K + + K+R Q E
Sbjct: 372 S-IRLIAELLSRAKAVKLREQEQKEEKLRLQQQEE 405
>AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 695
Score = 30.7 bits (66), Expect = 7.2
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKE-RRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQ 652
KR KLR + K ++E RRN+K +K++A E+K ++ EK+ + L R++Q
Sbjct: 317 KREEKLRKREQKQRDRELRRNQK--KLEKLQAEEQKQLQ---EKIKLEERKLLLAQRNLQ 371
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAE 547
S ++++ ++ + + K + + K+R Q E
Sbjct: 372 S-IRLIAELLSRAKAVKLREQEQKEEKLRLQQQEE 405
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,661,242
Number of Sequences: 237096
Number of extensions: 2155053
Number of successful extensions: 5453
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5438
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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