Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16m07
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical pr... 353 7e-98
AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical ... 353 7e-98
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 36 0.050
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 33 0.35
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 32 0.61
Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 30 1.9
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 30 2.5
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 30 2.5
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 30 2.5
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly... 30 2.5
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 30 2.5
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 29 3.3
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 29 3.3
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 29 3.3
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 3.3
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 29 3.3
Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 5.7
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 5.7
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 5.7
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 5.7
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80030-10|AAG24167.2| 378|Caenorhabditis elegans Serpentine rec... 29 5.7
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 29 5.7
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 7.5
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 28 7.5
U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine rece... 28 7.5
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 7.5
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 28 9.9
U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical pr... 28 9.9
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 28 9.9
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 353 bits (869), Expect = 7e-98
Identities = 166/233 (71%), Positives = 199/233 (85%), Gaps = 1/233 (0%)
Frame = -1
Query: 855 KLVSXINALKRRAK-LRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALP 679
KL + + AK LRG KAK+++K+R +EK++M+K +K HEEK+ K E+ +GA+P
Sbjct: 27 KLARAAHDRSQMAKTLRGHKAKLYHKKRYSEKVEMRKLLKQHEEKDQKNTVEQPDKGAVP 86
Query: 678 VYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
YLLDR Q+ VLSNMIKQKRK+KAGK++VPIP+VRA +DAE FKV+K+GK+ RK WK
Sbjct: 87 AYLLDRQQQTSGTVLSNMIKQKRKQKAGKFNVPIPQVRAVSDAEAFKVVKTGKTNRKGWK 146
Query: 498 RMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQM 319
RMVTKVTFVGE+FTRKP KFERFIRPM LRFKKAHVTHPEL+ TF LPI+GVKKNPSSQM
Sbjct: 147 RMVTKVTFVGESFTRKPAKFERFIRPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPSSQM 206
Query: 318 YTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 160
YTSLGVITKGT++EVN+SELG+VTQ GKVVWGK+AQVTNNPENDGCINAVLL+
Sbjct: 207 YTSLGVITKGTILEVNVSELGMVTQGGKVVWGKFAQVTNNPENDGCINAVLLI 259
>AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 353 bits (869), Expect = 7e-98
Identities = 166/233 (71%), Positives = 199/233 (85%), Gaps = 1/233 (0%)
Frame = -1
Query: 855 KLVSXINALKRRAK-LRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALP 679
KL + + AK LRG KAK+++K+R +EK++M+K +K HEEK+ K E+ +GA+P
Sbjct: 27 KLARAAHDRSQMAKTLRGHKAKLYHKKRYSEKVEMRKLLKQHEEKDQKNTVEQPDKGAVP 86
Query: 678 VYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWK 499
YLLDR Q+ VLSNMIKQKRK+KAGK++VPIP+VRA +DAE FKV+K+GK+ RK WK
Sbjct: 87 AYLLDRQQQTSGTVLSNMIKQKRKQKAGKFNVPIPQVRAVSDAEAFKVVKTGKTNRKGWK 146
Query: 498 RMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQM 319
RMVTKVTFVGE+FTRKP KFERFIRPM LRFKKAHVTHPEL+ TF LPI+GVKKNPSSQM
Sbjct: 147 RMVTKVTFVGESFTRKPAKFERFIRPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPSSQM 206
Query: 318 YTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 160
YTSLGVITKGT++EVN+SELG+VTQ GKVVWGK+AQVTNNPENDGCINAVLL+
Sbjct: 207 YTSLGVITKGTILEVNVSELGMVTQGGKVVWGKFAQVTNNPENDGCINAVLLI 259
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 35.5 bits (78), Expect = 0.050
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTE-KVAEGALPVYLLDRDVQ 652
K + K K K +ERR E+ + KK+K +EK N + + E +++
Sbjct: 980 KEKVKAEEQKIKAAEEERRKERAEDAKKVKEGQEKIAILNAKVQEKEDKSEARRKQKEMD 1039
Query: 651 SRAKVLSNMIKQKRKEK-AGKW 589
+ A+ L N+ K+K K K KW
Sbjct: 1040 NEAEKLLNVEKEKEKRKIIEKW 1061
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQM-KKKIKAHEEKNVKQNTEKV 697
K + K K K+ KER EK++ ++++KA EEK VK EKV
Sbjct: 941 KEKVKAEEEKVKV-EKERNKEKVKAEEERLKAEEEK-VKIEKEKV 983
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = -1
Query: 831 LKRRAKLRGIKAKIFNKERRNEKIQMKK-KIKAHEEKNVKQNTEKVAEGALPVYLLDRDV 655
+ R ++ IK + + EK++ ++ ++KA EEK VK EKV V +
Sbjct: 900 IPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEK-VKVEKEKVKAEEEKVKVEKERN 958
Query: 654 QSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKA 505
+ + K ++ + KA + V I K + +A+ + K + + K +A
Sbjct: 959 KEKVKA------EEERLKAEEEKVKIEKEKVKAEEQKIKAAEEERRKERA 1002
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -1
Query: 840 INALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKV 697
+ A + + K+ K K ++ + EK + K+K+KA EE+ +K EKV
Sbjct: 930 LKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEER-LKAEEEKV 976
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
F48F5.1 protein.
Length = 1291
Score = 35.1 bits (77), Expect = 0.065
Identities = 25/120 (20%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = -1
Query: 855 KLVSXINALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPV 676
++ + NAL+ + K + K+ +++ + EK +++ K++A +EK+ K+AE
Sbjct: 812 RIAAEKNALEAKIKEKSNMRKVVDEQNQREKDELQAKLRADQEKS---EARKIAEKKKDE 868
Query: 675 Y-LLDRDVQSRA---KVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRK 508
+++ + RA K + + +K+K++ + + + + +AD E + K + K+K
Sbjct: 869 QNQKEKEAKLRADQEKSEARKVAEKKKDEQNQKEKDKLQAKLRADQEKSEARKIAEKKKK 928
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 32.7 bits (71), Expect = 0.35
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = -1
Query: 831 LKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQ 652
+KR ++ + +E R E+I+ KK+ + ++K + + AE + V L ++ +
Sbjct: 413 IKREVQMEYERRWRIEEEERLEEIRRKKE-EERKKKEEEDEKRRKAEESERVRKL-KEEE 470
Query: 651 SRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFV 472
R +VL ++ KRK + K + AE+ + + ++ +K K K+ +
Sbjct: 471 KRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAEIKRREEKSRALKKLQKEETNKMEQM 530
Query: 471 GE-NFTRKPPKFERFIRP 421
F + P F R + P
Sbjct: 531 NNCTFLQNVPLF-RHLHP 547
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = -1
Query: 792 IFNKERRNEKIQMK----KKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNM 625
I K+RRN KI K +K++ EEK +++ ++ + + L + +S + SN
Sbjct: 437 IITKKRRNTKITRKQRLLRKVRKSEEKEKEKDRKRAKKALIKNSNLKKKRKSNSSSSSNG 496
Query: 624 IKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKV 481
+ K+ + D KV++ KSK W+R+ ++
Sbjct: 497 TTETSSTKSSSTSTKV------VDVPKEKVIE--KSKSSGWRRLANRI 536
>Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical
protein T04D3.2 protein.
Length = 604
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGA 685
+RR K + I K+ +++N++I++KKK+ EEK K E +
Sbjct: 452 ERRKKTKIIYDKVQLAKKKNKEIKLKKKVLEEEEKTEKMMENMTLENS 499
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSR-- 646
A++ + + +KERR + ++K A +EK +++ E+ E A Y L ++Q +
Sbjct: 929 AEVERARKEAEDKERR----EAEEKAAAEQEKILRRKMEEEREKAQKEYELQLEMQKQKL 984
Query: 645 AKVLSNMIKQKRKEKAGKWDVPIPKVRAQAD 553
A +K++ KE+ + D + A +D
Sbjct: 985 AAEAEEEVKRRNKEERDRLDAAVSSRLASSD 1015
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = -1
Query: 750 KKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP--I 577
+KIK H K+ ++ + +GA V + ++++ A+ + + + KE + DV I
Sbjct: 967 EKIKEHVASGDKEASKALVKGA--VDRQEGEIKTIAEKMFGICGEVYKESKSRRDVAAKI 1024
Query: 576 PK----VRAQADAEVFKVLKSGKSKRKAWKRMVTKV 481
K ++A+ E+ K+ K GKSK KR+ V
Sbjct: 1025 EKHLSWLQAEEKEEILKMSKEGKSKDDIKKRLFEMV 1060
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.9 bits (64), Expect = 2.5
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = -1
Query: 783 KERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNM--IKQKR 610
+E NEK++++++I+ E KN E + E LLDR+ + KV + ++++
Sbjct: 831 EELENEKLKLEEEIQEMEIKN----EEALKENLKLSMLLDREKSEKVKVQKELEEVEKQG 886
Query: 609 KEKAGKWDVPIPKV--RAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRK 451
+EK + + K + + E+F VL + K + V K+ V + RK
Sbjct: 887 REKLLEKEREFRKTMEEMEQNEEIFNVL---ERKYNEQHKKVMKMNDVLREYERK 938
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 828 KRRAKL-RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLL--DRD 658
+RRAK + +KA+ K ++NE++ KK K K K++T++ E A +L
Sbjct: 256 RRRAKEDQNVKARKTKKVKKNEEVPSKKSSKM--SKRSKRSTDENLETAKSSRILKDSEP 313
Query: 657 VQSRAKVLSNMIKQKR 610
SR+ V S I R
Sbjct: 314 KSSRSSVTSQKIDSSR 329
>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform c protein.
Length = 1198
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = -1
Query: 750 KKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP--I 577
+KIK H K+ ++ + +GA V + ++++ A+ + + + KE + DV I
Sbjct: 725 EKIKEHVASGDKEASKALVKGA--VDRQEGEIKTIAEKMFGICGEVYKESKSRRDVAAKI 782
Query: 576 PK----VRAQADAEVFKVLKSGKSKRKAWKRMVTKV 481
K ++A+ E+ K+ K GKSK KR+ V
Sbjct: 783 EKHLSWLQAEEKEEILKMSKEGKSKDDIKKRLFEMV 818
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a protein.
Length = 1440
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = -1
Query: 750 KKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP--I 577
+KIK H K+ ++ + +GA V + ++++ A+ + + + KE + DV I
Sbjct: 967 EKIKEHVASGDKEASKALVKGA--VDRQEGEIKTIAEKMFGICGEVYKESKSRRDVAAKI 1024
Query: 576 PK----VRAQADAEVFKVLKSGKSKRKAWKRMVTKV 481
K ++A+ E+ K+ K GKSK KR+ V
Sbjct: 1025 EKHLSWLQAEEKEEILKMSKEGKSKDDIKKRLFEMV 1060
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQS 649
KR++ + K K + ++ KKK K + +K ++++E E + + + DV+
Sbjct: 74 KRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEES-EGDVSEEDVKP 132
Query: 648 RAKVLSNMIKQK----RKEKAGKWDVPIPKVRAQADAE 547
+ + K K +K+ GK + P KV+ + D E
Sbjct: 133 QKRKSKGAEKSKPSTSKKDAGGKKEPPKKKVKKEEDIE 170
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 29.5 bits (63), Expect = 3.3
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Frame = -1
Query: 864 GSVKLVSXINALKRRAKLRGIKAKIFNKERR---NEKIQMKKKIKAHEEKNVKQNTEKVA 694
G V ++AL+ KL A+ F+K+ R ++ ++A +NVK TEK++
Sbjct: 465 GFVAFKEHMHALECLKKLNN-NAETFHKDHRPIVEFSVENLLALQARARRNVKNTTEKMS 523
Query: 693 EGALPVYLLDRDVQSRAKVLSNMI---------KQKRKEKAGKWDVPIPKVRAQADAEVF 541
E + + + QS +V + + K + + +G+ + +V+A +++
Sbjct: 524 ERVVNEKIRQQVKQSIGEVHTAGMKFLPKFTGKKIRHRNLSGRAKKNVDRVKAAKNSKQP 583
Query: 540 KVLKSGKSKRKAWKRMVTK 484
++ S K+KA K+ V+K
Sbjct: 584 EMPTSVGKKKKAMKKNVSK 602
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -1
Query: 786 NKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKR- 610
N E+ + + ++ K + H EK +N E + EG PV++ + Q + + +R
Sbjct: 18 NDEKPAKSVLLEPKYRDHHEKISFRNKENMEEGEKPVFVSMANPQPTREDYERYDEDRRL 77
Query: 609 KEKAGKWDVPIPKVRAQADAE 547
K+KA D+ I + R A E
Sbjct: 78 KDKAR--DLRIARRRNSATPE 96
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.3
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Frame = -1
Query: 801 KAKIFNKERRNEKIQMKKKIKAHEEK--NVKQNTEKVAEGALPVYLLDRDVQSRAKVLSN 628
K K +KE+ EK + K+KIK E+K ++++ TE+ +E A L + + + L
Sbjct: 389 KEKEKDKEKEREKRKSKEKIKEKEKKMGSLEKTTERTSE-APSTNALPKAKPKKIRTLPP 447
Query: 627 MIKQKRKEKAGKWDV-------PIPKVRAQADAEVFK--VLKSGKSKRKA 505
KQK + + V PI K + A+V K V G SK+KA
Sbjct: 448 --KQKHTKTSSTSSVSHQTPPSPIKKPSPKLPAQVKKKTVSTGGGSKQKA 495
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 735 HEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLS--NMIKQKRKEKAGKWD 586
+ KNV + EK+ G P+ + D D+ A V + +Q++ +KA +W+
Sbjct: 305 NSSKNVAEVVEKMNNGDWPIQIEDEDIPPSAAVNNPKRGYQQQQADKARQWE 356
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTE 703
K + K K K +ERR E+ + KK+K +EK N E
Sbjct: 941 KEKVKAEEQKIKSAEEERRKERAEDAKKVKEGQEKIAMLNAE 982
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQM-KKKIKAHEEKNVKQNTEKV 697
+ R K K K+ KER EK++ ++++KA EEK VK EKV
Sbjct: 902 EERLKAEEEKVKV-EKERNKEKVKAEEERLKAEEEK-VKIEKEKV 944
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -1
Query: 786 NKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKR- 610
N E+ + + ++ K + H EK +N E + EG PV++ + Q + + +R
Sbjct: 18 NDEKPAKSVLLEPKYRDHHEKISFRNKENMEEGEKPVFVSMANPQPTREDYERYDEDRRL 77
Query: 609 KEKAGKWDVPIPKVRAQADAE 547
K+KA D+ I + R A E
Sbjct: 78 KDKAR--DLRIARRRNSATPE 96
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = -1
Query: 840 INALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVY 673
I A K++ +++ ++AK+ ++++ E KIK EK ++ + +KV + LP +
Sbjct: 843 IEAEKKKKEIKDLEAKVDYEKQKGE------KIKEEAEKEIQDHRKKVEDDKLPKF 892
>Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical
protein T04A8.7b protein.
Length = 606
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
Frame = -1
Query: 612 RKEKAGKWDVPIP-KVRAQADAEVFKVLKSGKSKRKA-------WKRMVT----KVTFV- 472
+KE+ GKW + +P K V+K S+ A W VT K T +
Sbjct: 20 KKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVSRHGATHFKLSPWATFVTCPNPKETVIY 79
Query: 471 GENFTRKPPKFE----RFIRPMALRFKKAHV 391
+NF P K++ R RP +LR +AHV
Sbjct: 80 HQNFWNPPEKYQLKEARPARPASLRIYEAHV 110
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
Frame = -1
Query: 612 RKEKAGKWDVPIP-KVRAQADAEVFKVLKSGKSKRKA-------WKRMVT----KVTFV- 472
+KE+ GKW + +P K V+K S+ A W VT K T +
Sbjct: 95 KKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVSRHGATHFKLSPWATFVTCPNPKETVIY 154
Query: 471 GENFTRKPPKFE----RFIRPMALRFKKAHV 391
+NF P K++ R RP +LR +AHV
Sbjct: 155 HQNFWNPPEKYQLKEARPARPASLRIYEAHV 185
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -1
Query: 837 NALKRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYL-LDR 661
N KRRAK + + + ++ E ++ KK + EEK ++ E+ + ++ R
Sbjct: 219 NEEKRRAKEKADRDAHVARHKQAEALEKKK--REQEEKQKNEDRERATQKERREHIERHR 276
Query: 660 DVQSRAKVLSNMIKQKRKEKAGK 592
++RAK L K +++EK K
Sbjct: 277 QAEARAKALEKE-KHEQEEKQKK 298
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1049 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1107
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1108 QSTSSTISNVTAKERKEKSGK 1128
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1340 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1398
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1399 QSTSSTISNVTAKERKEKSGK 1419
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1355 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1413
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1414 QSTSSTISNVTAKERKEKSGK 1434
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1355 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1413
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1414 QSTSSTISNVTAKERKEKSGK 1434
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1049 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1107
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1108 QSTSSTISNVTAKERKEKSGK 1128
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1340 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1398
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1399 QSTSSTISNVTAKERKEKSGK 1419
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1355 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1413
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1414 QSTSSTISNVTAKERKEKSGK 1434
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -1
Query: 819 AKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDV----- 655
AK G AK K+R+ K++ ++ + +KN K++ + + D
Sbjct: 1355 AKHPGWSAKDDQKQRKR-KLEHRRSSEDESKKNAKRDFRDIPHEDVSDEEETEDGSRSRR 1413
Query: 654 QSRAKVLSNMIKQKRKEKAGK 592
QS + +SN+ ++RKEK+GK
Sbjct: 1414 QSTSSTISNVTAKERKEKSGK 1434
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 28.7 bits (61), Expect = 5.7
Identities = 35/150 (23%), Positives = 62/150 (41%)
Frame = -1
Query: 822 RAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRA 643
++KL GI ++ R K ++K+ K EK++ + T ++ + D ++
Sbjct: 901 QSKLDGIFKELVQCHRDEAKESLQKRQKL--EKDIAKETANISNSGRNIAKCDENISRHD 958
Query: 642 KVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGEN 463
K + M K+K +E K A D EV KS K + +++ + K+ GE
Sbjct: 959 KDIEKM-KKKCEELMEK---------AIDDEEV----KSKKETVERFEKQIKKLQTKGEE 1004
Query: 462 FTRKPPKFERFIRPMALRFKKAHVTHPELK 373
T+K + + KK ELK
Sbjct: 1005 MTKKQSELSAAETKLEGELKKCSEGIKELK 1034
>U80030-10|AAG24167.2| 378|Caenorhabditis elegans Serpentine
receptor, class w protein136 protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 374 FSSGCVTWAFLNLSAIGLMNRSNLGGLRVKFSPTNVTLVTMRFQAFLFDLP 526
FS C TW FL+++ I + N L+ K T F FL LP
Sbjct: 122 FSRRCSTWLFLSIAFIRTLIVRNPMNLKYKQLSNQPTAFYTIFGVFLLSLP 172
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = -1
Query: 828 KRRAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGAL 682
+ R++ RG +++ + R++ K + + ++K EEK K+N EK + L
Sbjct: 78 RSRSRSRG-RSQERRRSRKSRKSRSRSRLKHREEKIEKKNLEKAPKNEL 125
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -1
Query: 840 INALKRRAKLRGIKAKIFNKERRNEKIQMKK---KIKAHEEKNVKQNTEKVAEGALPVYL 670
I AL+ + + NKER+N++ Q KK ++A EE+N+ N K A+ +
Sbjct: 991 IRALQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLK-AKLMQSLED 1049
Query: 669 LDRDVQSRAKVLSNMIKQKRK 607
++ ++ + ++M K KRK
Sbjct: 1050 SEQTMEREKRNRADMDKNKRK 1070
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -1
Query: 840 INALKRRAKLRGIKAKIFNKERRNEKIQMKK---KIKAHEEKNVKQNTEKVAEGALPVYL 670
I AL+ + + NKER+N++ Q KK ++A EE+N+ N K A+ +
Sbjct: 991 IRALQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLK-AKLMQSLED 1049
Query: 669 LDRDVQSRAKVLSNMIKQKRK 607
++ ++ + ++M K KRK
Sbjct: 1050 SEQTMEREKRNRADMDKNKRK 1070
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -1
Query: 840 INALKRRAKLRGIKAKIFNKERRNEKIQMKK---KIKAHEEKNVKQNTEKVAEGALPVYL 670
I AL+ + + NKER+N++ Q KK ++A EE+N+ N K A+ +
Sbjct: 991 IRALQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLK-AKLMQSLED 1049
Query: 669 LDRDVQSRAKVLSNMIKQKRK 607
++ ++ + ++M K KRK
Sbjct: 1050 SEQTMEREKRNRADMDKNKRK 1070
>U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 7 protein.
Length = 339
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 113 LLNCDNYTFNNEHVYHNTY--NLYWLQSLWTVCTM 15
+ N + Y N Y N Y + YW+Q LW + T+
Sbjct: 7 IYNLEQYGTNCSEEYSNFYENSKYWIQCLWLIPTL 41
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 822 RAKLRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEK 700
+ K+ + AK+ KE R+E + +K+ EEK + + EK
Sbjct: 933 KEKIEQLNAKVREKEERSEARRKQKEKDDEEEKRLYEEKEK 973
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 669 LDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQAD 553
++R++ RAK + + ++K G+WD P A +D
Sbjct: 169 VERELADRAKAGELHVTGQPEKKKGRWDAEAPSTDASSD 207
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 669 LDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQAD 553
++R++ RAK + + ++K G+WD P A +D
Sbjct: 169 VERELADRAKAGELHVTGQPEKKKGRWDAEAPSTDASSD 207
>U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical
protein F52E4.7 protein.
Length = 848
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 810 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKV 697
RGI+ + +++ +I++KK I H K VK+ E++
Sbjct: 745 RGIRPDEISYQQQFSRIELKKVISQHPGKEVKKGLEQL 782
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = -1
Query: 801 KAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMI 622
K K+ +++ + + + KKIK +KN ++EKV + V+ + + +A V N
Sbjct: 1174 KEKVVDEKDKADGEPVDKKIKVDSKKNGTTSSEKVVKDD-EVHQNGSETEKKATV-DNKE 1231
Query: 621 KQKRKEKAGKWDVPIPKVRAQADAEV 544
++KR K+ K D EV
Sbjct: 1232 RKKRPGKSSHGSKESKKEPTTEDGEV 1257
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -1
Query: 780 ERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEK 601
E R E ++ +K+ EEK K+N E+V + R ++RAK L K++ +EK
Sbjct: 280 EARAEALEKEKR--EQEEKQKKENLERVEKERREHIERHRQAEARAKALEKE-KRELEEK 336
Query: 600 AGK 592
K
Sbjct: 337 QKK 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,714,628
Number of Sequences: 27780
Number of extensions: 352257
Number of successful extensions: 1311
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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