Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16m02
(794 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.81
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 1.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 1.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 1.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 1.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 1.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 1.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 1.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 1.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 1.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 10.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 10.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 10.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 10.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 10.0
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.0 bits (52), Expect = 0.81
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 158 TICSITNKNTNTEIIQYMCYNN*-YNSFKKLDLVIIAI 48
TI + N N N Y YNN YN++KKL II I
Sbjct: 322 TIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYNIINI 359
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN YN +L+YNI++I
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 63 SNNCYNFIFRLFYNISFI 10
+NN YN +L+YNI++I
Sbjct: 97 NNNNYNNYKKLYYNINYI 114
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 63 SNNCYNFIFRLFYNISFI 10
+NN YN +L+YNI++I
Sbjct: 107 NNNNYNNYKKLYYNINYI 124
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 140 NKNTNTEIIQYMCYNN*YNSFKKL 69
N N Y NN YN++KKL
Sbjct: 94 NNYNNNNYNNYNYNNNNYNNYKKL 117
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 63 SNNCYNFIFRLFYNISFI 10
+NN N+ +L+YNI++I
Sbjct: 98 NNNYNNYNKKLYYNINYI 115
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 146 ITNKNTNTEIIQYMCYNN*YNSFKK 72
I++ + N Y YNN YN++ K
Sbjct: 82 ISSLSNNYNYSNYNNYNNNYNNYNK 106
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN N +L+YNI++I
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN N +L+YNI++I
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN N +L+YNI++I
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 66 SSNNCYNFIFRLFYNISFI 10
++NN N +L+YNI++I
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 72 IRSSNNCYNFIFRLFYNI 19
I ++NN N+ +L+YNI
Sbjct: 323 IHNNNNYKNYNKKLYYNI 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,017
Number of Sequences: 438
Number of extensions: 4758
Number of successful extensions: 26
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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