Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16j02
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 148 4e-36
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 46 2e-05
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 46 2e-05
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 44 1e-04
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 43 2e-04
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 43 2e-04
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 40 0.001
Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 40 0.002
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 40 0.002
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 40 0.002
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 38 0.006
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 38 0.008
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 38 0.008
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 37 0.017
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 37 0.017
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 36 0.023
AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical ... 36 0.023
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 36 0.030
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 35 0.053
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 34 0.093
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 34 0.093
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 33 0.16
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 33 0.16
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 33 0.16
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 32 0.38
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 32 0.50
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 32 0.50
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 31 0.66
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 31 0.66
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 31 0.66
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 31 0.87
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 31 0.87
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 31 0.87
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 31 0.87
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 31 0.87
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 31 0.87
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024779-4|AAK68484.1| 439|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 29 2.6
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 29 3.5
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 3.5
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 29 4.6
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 29 4.6
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 29 4.6
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 29 4.6
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 29 4.6
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 29 4.6
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 29 4.6
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 29 4.6
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 29 4.6
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 29 4.6
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 29 4.6
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 8.1
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 28 8.1
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 8.1
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 148 bits (359), Expect = 4e-36
Identities = 78/223 (34%), Positives = 118/223 (52%), Gaps = 5/223 (2%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH +AV L+WNR THVLASG D TV LWD+D+ P + ++Q++ +HP E+
Sbjct: 244 GHTDAVISLAWNRITTHVLASGGADKTVVLWDLDEAKPAQIIPDQGGEIQTMKWHPNEST 303
Query: 544 TLAAGACDGGVRVADCRTPA--AHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDC 371
L G G V V DCR + A AW +IE+V W+ NPF S+++G++ ++D
Sbjct: 304 FLLLGTMKGQVNVVDCRESSGNASAAWKFDGQIEKVIWNHFNPFTAFCSSDDGRLRHLDM 363
Query: 370 RQ-DEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDI--TRSGAVTASGRAVR 200
R+ E LW AH+ + GL LS GL++TV D M W + T G +
Sbjct: 364 RKPGECLWEGVAHDGPIGGLTLSALTKGLLVTVGEDEMMNVWKVEDTNGGIEKVHSEKLT 423
Query: 199 VGQALCAALCPDAPYSVAVGGDNKENYLEMVDLSLSDDFLNRF 71
+G+ CA PD ++VGG + + ++DL+ + + F
Sbjct: 424 IGELHCAQFNPDVAAVLSVGG-TAADLIRIIDLTKYEPVVKAF 465
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 57.6 bits (133), Expect = 9e-09
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLE-A 548
GH AV DL + + + +++ G+ D +V +WDM+ GT + D V +V HP
Sbjct: 79 GHSGAVMDLKFTTDSSSLVSCGT-DKSVRVWDMETGTCARRFRTHTDFVNAV--HPSRRG 135
Query: 547 QTLAAGACDGGV-RVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDC 371
TL A A D G RV D RT + + + V ++ + + + + D
Sbjct: 136 VTLVASASDDGTCRVHDMRTKEPVKTYTNRYQQTAVTFNDSSDQVIS-GGIDNVLKVWDM 194
Query: 370 RQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDI 242
R+DE +T+ H +TG+ LS +I+ S D ++ WDI
Sbjct: 195 RRDEITYTLTGHRDTITGISLSPS-GKFIISNSMDCTVRQWDI 236
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 16/177 (9%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH+ V D++W+ V S D + +WD+ TP + +V ++F+P
Sbjct: 220 GHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEF 279
Query: 544 TLAAGACDGGVRVADCRT--PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNE-------- 395
LA G+ D V + D R H EI +V W N A S +
Sbjct: 280 ILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
Query: 394 ---GKVAYVDCRQDEP---LWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDI 242
G+ + +D P L+ H +++ + P ++ +VS D ++ W +
Sbjct: 340 SKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMD-----QGTPHTKLXY--FXDKVQSVS 566
GH + LSWN N ++ S S D TV WD++ G K + V+ V+
Sbjct: 170 GHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVA 229
Query: 565 FHPLEAQTLAAGACDGGVRVADCRTPA-AHRAWHLPPEIERVAWDQLNPFCFAMSNNEGK 389
+H L + D + + D RT H E+ +A++ + F A + +
Sbjct: 230 WHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKT 289
Query: 388 VAYVDCRQ-DEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSG 230
VA D R L + ++H E+ + S ++ + TD + WD+++ G
Sbjct: 290 VALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 358 PLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSGAVTASGRA 206
PL ++ H KE GL + GL+++ S D + WDI + V +A
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQA 214
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 16/177 (9%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH+ V D++W+ V S D + +WD+ TP + +V ++F+P
Sbjct: 220 GHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEF 279
Query: 544 TLAAGACDGGVRVADCRT--PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNE-------- 395
LA G+ D V + D R H EI +V W N A S +
Sbjct: 280 ILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
Query: 394 ---GKVAYVDCRQDEP---LWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDI 242
G+ + +D P L+ H +++ + P ++ +VS D ++ W +
Sbjct: 340 SKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMD-----QGTPHTKLXY--FXDKVQSVS 566
GH + LSWN N ++ S S D TV WD++ G K + V+ V+
Sbjct: 170 GHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVA 229
Query: 565 FHPLEAQTLAAGACDGGVRVADCRTPA-AHRAWHLPPEIERVAWDQLNPFCFAMSNNEGK 389
+H L + D + + D RT H E+ +A++ + F A + +
Sbjct: 230 WHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKT 289
Query: 388 VAYVDCRQ-DEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSG 230
VA D R L + ++H E+ + S ++ + TD + WD+++ G
Sbjct: 290 VALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 358 PLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSGAVTASGRA 206
PL ++ H KE GL + GL+++ S D + WDI + V +A
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQA 214
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 16/177 (9%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH+ V D++W+ V S D + +WD+ TP + +V ++F+P
Sbjct: 220 GHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEF 279
Query: 544 TLAAGACDGGVRVADCRT--PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNE-------- 395
LA G+ D V + D R H EI +V W N A S +
Sbjct: 280 ILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
Query: 394 ---GKVAYVDCRQDEP---LWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDI 242
G+ + +D P L+ H +++ + P ++ +VS D ++ W +
Sbjct: 340 SKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMD-----QGTPHTKLXY--FXDKVQSVS 566
GH + LSWN N ++ S S D TV WD++ G K + V+ V+
Sbjct: 170 GHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVA 229
Query: 565 FHPLEAQTLAAGACDGGVRVADCRTPA-AHRAWHLPPEIERVAWDQLNPFCFAMSNNEGK 389
+H L + D + + D RT H E+ +A++ + F A + +
Sbjct: 230 WHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKT 289
Query: 388 VAYVDCRQ-DEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSG 230
VA D R L + ++H E+ + S ++ + TD + WD+++ G
Sbjct: 290 VALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 358 PLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSGAVTASGRA 206
PL ++ H KE GL + GL+++ S D + WDI + V +A
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQA 214
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 46.4 bits (105), Expect = 2e-05
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 20/175 (11%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPH----TKLXYFXDKVQSVSFHP 557
GHK++V DL+W+ T +LAS S D ++ LWD T V +S++
Sbjct: 273 GHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNR 332
Query: 556 LEAQTLAAGACDGGVRVADCRT-----PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEG 392
E + +G DG +++ +T P A +H P I V W F S +
Sbjct: 333 HE-NLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSP-ITSVDWHPHETTTFMASGEDD 390
Query: 391 KVAYVDCRQD-----------EPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGF 260
+ D + L V + EV + ++PGL I S DGF
Sbjct: 391 QTTIWDIATEADGQTNIEGVPPQLMFVHMGQNEVKEVHWHQQIPGLAINTSIDGF 445
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = -3
Query: 736 TKRIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ---GTPHTKLXYFXDKVQSVS 566
T + H+ V +SWNR+ +++ SG D + +W + G P Y + SV
Sbjct: 316 TVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVD 374
Query: 565 FHPLEAQTLAAGACDGGVRVADCRTPA 485
+HP E T A D + D T A
Sbjct: 375 WHPHETTTFMASGEDDQTTIWDIATEA 401
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = -3
Query: 700 LSWNRNFTHVLASGSXDNTVXLWDMDQG----TPHTKLXYFXDKVQSVSFHPLEAQTLAA 533
L+W+ T LA+G + LW M +G L V+ +++ P E LA+
Sbjct: 234 LAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLAS 293
Query: 532 GACDGGVRVADCRT 491
+ DG +++ D R+
Sbjct: 294 CSADGSIKLWDTRS 307
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 454 IERVAWDQLNPFCFAMSNNEGKVAYVDCR---QDEPLWTVQ-AHEKEVTGLILSNKVPGL 287
+E +AW A + +G + D R +D + TVQ AHE +V +I N+ L
Sbjct: 278 VEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVN-VISWNRHENL 336
Query: 286 MITVSTDGFMKTWDI 242
+++ DG +K W +
Sbjct: 337 IVSGGDDGELKIWSL 351
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = -3
Query: 445 VAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQA-----HEKEVTGLILSNKVPGLMI 281
+AW L A + K+ Y+ ++ W V A H+K V L S GL+
Sbjct: 234 LAWSSLKTGDLATGDIIKKI-YLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLA 292
Query: 280 TVSTDGFMKTWDITRS 233
+ S DG +K WD TRS
Sbjct: 293 SCSADGSIKLWD-TRS 307
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical protein
R03E1.1 protein.
Length = 1043
Score = 44.0 bits (99), Expect = 1e-04
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH + D+SW++N+ +L+SG D TV LW + + + D V V+F P + +
Sbjct: 715 GHTADILDVSWSKNY-FILSSG-MDRTVKLWHLSRNECLCCFQHI-DFVTCVAFLPKDDR 771
Query: 544 TLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFAMS-NNEGKVAYVDCR 368
+G+ DG +R+ WH+P + V D + AM+ GK A V
Sbjct: 772 YFLSGSLDGKLRM-----------WHIPDKKVAVWNDTEKKYITAMTFVKSGKFAVVGTY 820
Query: 367 QDEPLWTVQAHEKEVTGLIL---------SNKVPGL------MITVSTDGFMKTWDITRS 233
+ ++ K T + + +KV GL ++ S D ++ +DI R
Sbjct: 821 DGKCIFYTSDQLKYHTAVDVRSTRGKNARGHKVTGLTSHGDKLLVTSNDSRIRMYDI-RD 879
Query: 232 GAVTASGRAVRVGQA-LCAALCPDAPYSVAVGGDNKENYL 116
A+T + V+ + + AA PD + + G ++K Y+
Sbjct: 880 KALTCKFKGVQNDHSQIRAAFSPDGRH-IICGSEDKFVYI 918
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 44.0 bits (99), Expect = 1e-04
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH + D+SW++N+ +L+SG D TV LW + + + D V V+F P + +
Sbjct: 715 GHTADILDVSWSKNY-FILSSG-MDRTVKLWHLSRNECLCCFQHI-DFVTCVAFLPKDDR 771
Query: 544 TLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFAMS-NNEGKVAYVDCR 368
+G+ DG +R+ WH+P + V D + AM+ GK A V
Sbjct: 772 YFLSGSLDGKLRM-----------WHIPDKKVAVWNDTEKKYITAMTFVKSGKFAVVGTY 820
Query: 367 QDEPLWTVQAHEKEVTGLIL---------SNKVPGL------MITVSTDGFMKTWDITRS 233
+ ++ K T + + +KV GL ++ S D ++ +DI R
Sbjct: 821 DGKCIFYTSDQLKYHTAVDVRSTRGKNARGHKVTGLTSHGDKLLVTSNDSRIRMYDI-RD 879
Query: 232 GAVTASGRAVRVGQA-LCAALCPDAPYSVAVGGDNKENYL 116
A+T + V+ + + AA PD + + G ++K Y+
Sbjct: 880 KALTCKFKGVQNDHSQIRAAFSPDGRH-IICGSEDKFVYI 918
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = -3
Query: 739 KTKRIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFH 560
++K GH D+S++ V S D + LWD+ Q P +V ++F+
Sbjct: 214 QSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFN 273
Query: 559 PLEAQTLAAGACDGGVRVADCRT--PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKV 386
P LA G+ D V + D R + H EI +V++ A S ++ +V
Sbjct: 274 PFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRV 333
Query: 385 AYVD 374
D
Sbjct: 334 IVWD 337
Score = 41.9 bits (94), Expect = 5e-04
Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Frame = -3
Query: 724 GHKEAVXDLSW-NRNFTHVLASGSXDNTVXLWDMD-------QGTPHTKLXYFXDKVQSV 569
GH+ +SW N H+L +G D + WD++ Q P +K + V
Sbjct: 169 GHEGEGYGMSWSNTREGHLLTAGD-DGMICHWDINANQTISGQIVPQSKFKGHSSNAEDV 227
Query: 568 SFHPLEAQTLAAGACDGGVRVADCR--TPAAHRAWHLPPEIERVAWDQLNPFCFAMSNNE 395
SFH L + D + + D R P H E+ + ++ + + A + +
Sbjct: 228 SFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGH-TAEVNCITFNPFSEYILATGSVD 286
Query: 394 GKVAYVDCR-QDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSGAVTA 218
VA D R + ++T++ H E+ + S ++ + +D + WDI++ ++
Sbjct: 287 KTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSS 346
Query: 217 SGRA 206
S A
Sbjct: 347 SSAA 350
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Frame = -3
Query: 463 PPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQ--DEPLWT-------VQAHEKEVTGLI 311
P E+ R + NPF A V D + EP T ++ HE E G+
Sbjct: 119 PGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMS 178
Query: 310 LSNKVPGLMITVSTDGFMKTWDITRSGAVTASGRAV 203
SN G ++T DG + WDI + T SG+ V
Sbjct: 179 WSNTREGHLLTAGDDGMICHWDINAN--QTISGQIV 212
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM 626
GH V D SWN N + S N + +W++
Sbjct: 365 GHTGKVADFSWNPNRPWTICSSDEFNALQVWEV 397
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 43.2 bits (97), Expect = 2e-04
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 1/166 (0%)
Frame = -3
Query: 730 RIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWD-MDQGTPHTKLXYFXDKVQSVSFHPL 554
R H + +N N HV+A+ D V +WD + T L V SV FHP+
Sbjct: 204 RDAHIHRTISMDFNPNLQHVIATCGDDGYVRIWDTRSTSSALTSLHPHAHWVWSVRFHPV 263
Query: 553 EAQTLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVD 374
Q L G D V ++ ++ ++ + + E D L V+
Sbjct: 264 HDQLLLTGGSDASVVLSCAQSVSSEQQIEFRDDEEEEEDDDL----------------VE 307
Query: 373 CRQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITR 236
QD L + HE V S+ P ++S DG M +++R
Sbjct: 308 KLQDGQLERIDEHEDSVYACAWSSADPWTFASLSYDGRMIVSNVSR 353
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 394 GKVAY-VDCRQDEPLWTVQ-AHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRS 233
G+ A+ +DCR D ++ AH + + + ++ T DG+++ WD TRS
Sbjct: 186 GRTAWCIDCRTDNEYLKIRDAHIHRTISMDFNPNLQHVIATCGDDGYVRIWD-TRS 240
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -3
Query: 742 KKTKRI-GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVS 566
+ TK + GH V ++N + ++ SGS D +V +WD+ G L D V +VS
Sbjct: 162 RMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVS 220
Query: 565 FHPLEAQTLAAGACDGGVRVAD 500
F+ + +A+G+ DG VR+ D
Sbjct: 221 FN-RDGSLIASGSYDGLVRIWD 241
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GHK V D++W+ + + + S S D T+ ++++ L + V +F+P ++
Sbjct: 127 GHKLGVNDIAWSSD-SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP-QSS 184
Query: 544 TLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLN--PFCFAMSNNEGKVAYVDC 371
+ +G+ D VR+ D +T + LP + V+ N A + +G V D
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKT--LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Query: 370 RQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITR 236
+ + T+ E + + ++ + D +K WD ++
Sbjct: 243 ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEA- 548
GH V L WN+ +LASGS D V +W + H + V +V F
Sbjct: 39 GHSGCVNTLRWNKTGA-LLASGSDDRNVKIWKSGREI-HNLVTGHEGNVFAVEFLQNSGD 96
Query: 547 QTLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCF-AMSNNEGKVAYVDC 371
Q L GA D V + D + W L ++R+ + +P F A + V D
Sbjct: 97 QKLVTGAADRVVALHDIEASTC-KKWELDGRVKRICTVEHDPTLFWAAVECDNGVQQFDT 155
Query: 370 RQDEP 356
R + P
Sbjct: 156 RTENP 160
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 41.5 bits (93), Expect = 6e-04
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Frame = -3
Query: 670 LASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRT 491
+ S S D TV LW + Q +P +L +V V+FHP LA D R+ D T
Sbjct: 269 VVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHP-NGHHLATACFDSTWRMYDLTT 327
Query: 490 --PAAHRAWHLPPEIERVAWDQLNPFCFAMSNN-EGKVAYVDCRQDEPLWTVQAHEKEVT 320
++ H + VA+ ++ G+V D R + + H KE+
Sbjct: 328 KKELLYQEGH-SKSVADVAFHPDGSVALTGGHDCYGRV--WDMRTGRCIMFLDGHTKEIH 384
Query: 319 GL-ILSNKVPGLMITVSTDGFMKTWDI 242
+ + N MIT S+D MK WD+
Sbjct: 385 SVEWMPNGYE--MITGSSDNSMKVWDL 409
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM 626
GH + + + W N + + +GS DN++ +WD+
Sbjct: 378 GHTKEIHSVEWMPN-GYEMITGSSDNSMKVWDL 409
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH V +N + T ++ASGS D T+ +W G + D V SV F+ +
Sbjct: 188 GHTNYVFCCCFNPSGT-LIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFN-RDGA 245
Query: 544 TLAAGACDGGVRVADCRT 491
LA+G+ DG VR+ D T
Sbjct: 246 YLASGSYDGIVRIWDSTT 263
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGT 614
GH++ V + +NR+ + LASGS D V +WD GT
Sbjct: 230 GHEDPVSSVCFNRDGAY-LASGSYDGIVRIWDSTTGT 265
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -3
Query: 685 NFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRV 506
N TH+L SGS D ++ W+++ G L + V+ ++FHP + + L + A D +RV
Sbjct: 300 NSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHP-KGKYLISVADDKTLRV 358
Query: 505 ADCRTPAAHRAWHLPPE-IERVAWDQLNPF 419
+ +A + VA+ Q +PF
Sbjct: 359 WELSAQRCMKAIEAHEHFVSTVAFHQTSPF 388
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -3
Query: 685 NFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRV 506
N TH+L SGS D ++ W+++ G L + V+ ++FHP + + L + A D +RV
Sbjct: 300 NSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHP-KGKYLISVADDKTLRV 358
Query: 505 ADCRTPAAHRAWHLPPE-IERVAWDQLNPF 419
+ +A + VA+ Q +PF
Sbjct: 359 WELSAQRCMKAIEAHEHFVSTVAFHQTSPF 388
>Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical
protein F32H2.4 protein.
Length = 298
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQT 542
H +V ++ + ++ AS S D + +WD+ Q P ++ +S+ P +
Sbjct: 46 HSSSVEQVACSEKQPNLFASASADRNICVWDIRQSKPTHRISNRVGNF-FISWSPCDEYF 104
Query: 541 LAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQD 362
+ D + D R ++ + + + L+ F ++ + GKV +
Sbjct: 105 IFLDK-DNRINTVDIRNYQVVNSYEMKTFSHELTFHPLSNHVF-VAESGGKVEILKFAGG 162
Query: 361 --EPLWTVQAHEKEVTGLILSNKVPGLMITV-STDGFMKTWDI 242
EP+ ++QAH +V L +S G + V ++D WD+
Sbjct: 163 ALEPVTSIQAHSHQVECLAVSISKDGRKLAVGASDASCSLWDL 205
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 39.5 bits (88), Expect = 0.002
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 19/170 (11%)
Frame = -3
Query: 694 WNRNFTHVLASGSXDNTVXLWDMD--------------QGTPHTKLXYFXDKVQSVSFHP 557
WN +++ + S D T +W ++ GT T+L +V +SF
Sbjct: 263 WNELDMNLIGTSSIDTTCTVWQLETGQAIGTTRPTAAIDGTVRTQLIAHDKEVFDISFSR 322
Query: 556 LEAQTLAAGACDGGVRVADCRTPAAHRAWHLPPE---IERVAWDQLNPFCFAMSNNEGK- 389
AQ A+ DG +R+ D R + P+ + R+AW++ + A + K
Sbjct: 323 GSAQIFASVGADGSLRLFDLRRLEHSTIMYEDPQRQPLLRLAWNRNDHNYIATFGQDSKE 382
Query: 388 VAYVDCRQD-EPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDI 242
V +D R P+ ++ HE + GL + + T D WD+
Sbjct: 383 VLILDLRLPCTPVARLRNHEATINGLSWAPHSGSHICTAGDDYQALIWDV 432
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -3
Query: 739 KTKRIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXY 593
+T+ I H + V D+S++R + AS D ++ L+D+ + H+ + Y
Sbjct: 305 RTQLIAHDKEVFDISFSRGSAQIFASVGADGSLRLFDL-RRLEHSTIMY 352
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH+ + L + ++ SGS DNT+ LWD+ G L + V+ + F + +
Sbjct: 383 GHRRGIACLQYRGR---LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF---DEK 436
Query: 544 TLAAGACDGGVRVADCRTPAAHRA 473
+ +GA DG ++V D + RA
Sbjct: 437 RIVSGAYDGKIKVWDLQAALDPRA 460
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSF 563
GH +V L ++ V+ SGS D TV +WD++ G L + + V + F
Sbjct: 260 GHTGSVLCLQYDNR---VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF 310
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -3
Query: 403 NNEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSGAV 224
+++ V D E + T+ H + V L +N G+M+T S D + WD+ +
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRFAN---GIMVTCSKDRSIAVWDMVSPRDI 335
Query: 223 TASGRAVRVG-QALCAALCPDAPYSVAVGGD 134
T R V VG +A + D Y V+ GD
Sbjct: 336 TI--RRVLVGHRAAVNVVDFDDRYIVSASGD 364
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH+ + L + ++ SGS DNT+ LWD+ G L + V+ + F + +
Sbjct: 383 GHRRGIACLQYRGR---LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF---DEK 436
Query: 544 TLAAGACDGGVRVADCRTPAAHRA 473
+ +GA DG ++V D + RA
Sbjct: 437 RIVSGAYDGKIKVWDLQAALDPRA 460
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSF 563
GH +V L ++ V+ SGS D TV +WD++ G L + + V + F
Sbjct: 260 GHTGSVLCLQYDNR---VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF 310
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -3
Query: 403 NNEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSGAV 224
+++ V D E + T+ H + V L +N G+M+T S D + WD+ +
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRFAN---GIMVTCSKDRSIAVWDMVSPRDI 335
Query: 223 TASGRAVRVG-QALCAALCPDAPYSVAVGGD 134
T R V VG +A + D Y V+ GD
Sbjct: 336 TI--RRVLVGHRAAVNVVDFDDRYIVSASGD 364
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 38.3 bits (85), Expect = 0.006
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH V LS + +F SG+ D + LWD+ G + +V+F P
Sbjct: 182 GHTGDVMSLSLSPDF-RTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFP-SGN 239
Query: 544 TLAAGACDGGVRVADCRTP---AAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVD 374
A G+ D R+ D R A + ++ I VA+ + FA ++ D
Sbjct: 240 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFA-GYDDFNCNVWD 298
Query: 373 CRQDEPLWTVQAHEKEVTGLILSNKVPGLMI-TVSTDGFMKTWD 245
+ E + H+ V+ L ++ G+ + T S D F+K W+
Sbjct: 299 SMRQERAGVLAGHDNRVSCLGVTE--DGMAVCTGSWDSFLKIWN 340
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 38.3 bits (85), Expect = 0.006
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH V LS + +F SG+ D + LWD+ G + +V+F P
Sbjct: 182 GHTGDVMSLSLSPDF-RTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFP-SGN 239
Query: 544 TLAAGACDGGVRVADCRTP---AAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVD 374
A G+ D R+ D R A + ++ I VA+ + FA ++ D
Sbjct: 240 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFA-GYDDFNCNVWD 298
Query: 373 CRQDEPLWTVQAHEKEVTGLILSNKVPGLMI-TVSTDGFMKTWD 245
+ E + H+ V+ L ++ G+ + T S D F+K W+
Sbjct: 299 SMRQERAGVLAGHDNRVSCLGVTE--DGMAVCTGSWDSFLKIWN 340
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 37.9 bits (84), Expect = 0.008
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH V LS + +F SG+ D + LWD+ G + +V+F P
Sbjct: 182 GHTGDVMSLSLSPDF-RTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFP-SGN 239
Query: 544 TLAAGACDGGVRVADCRTP---AAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVD 374
A G+ D R+ D R A + ++ I VA+ + FA ++ D
Sbjct: 240 RFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFA-GYDDFNCNVWD 298
Query: 373 CRQDEPLWTVQAHEKEVTGLILSNKVPGLMI-TVSTDGFMKTWD 245
+ E + H+ V+ L ++ G+ + T S D F+K W+
Sbjct: 299 SMRQERAGVLAGHDNRVSCLGVTE--DGMAVCTGSWDSFLKIWN 340
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 37.9 bits (84), Expect = 0.008
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 11/170 (6%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH E V ++ + LASGS D T+ +WD++ P V +++ P +A
Sbjct: 103 GHGEPVISAQFSPD-GRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSP-DAT 160
Query: 544 TLAAGACDGGVRVADCRTP-------AAHRAWHLPPEIERVAWDQL--NPFC--FAMSNN 398
+A+ +G + + + +T H+ W I +AW + +P C A
Sbjct: 161 KIASACKNGEICIWNAKTGEQIGKTLKRHKQW-----ITSLAWQPMHKDPTCRLLASCGK 215
Query: 397 EGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTW 248
+G + D Q + + H VT L + GL+ + S D +K W
Sbjct: 216 DGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGE--GLIYSGSQDRTVKMW 263
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/65 (24%), Positives = 36/65 (55%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH V ++W+ + + +L SGS D+T+ ++++ + + L D+V +V + P +
Sbjct: 400 GHVGPVYQVAWSAD-SRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTK 458
Query: 544 TLAAG 530
++ G
Sbjct: 459 VVSGG 463
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQG 617
GH +V L W ++ SGS D TV +W D G
Sbjct: 235 GHTASVTCLRWGGE--GLIYSGSQDRTVKMWRADDG 268
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/78 (20%), Positives = 38/78 (48%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH++ V ++W+ +VL + +N + +W++ G ++ D++ S++F+ +
Sbjct: 127 GHQKRVNTIAWHPVANNVLLTAGGENVMFMWNVGTGEALLEISGHPDQIWSINFN-FDGS 185
Query: 544 TLAAGACDGGVRVADCRT 491
D +R+ D T
Sbjct: 186 QFVTTCKDKKIRILDSHT 203
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM-DQG------TPHTKLXYFXDKVQSVSF 563
HK +++W+ +V+AS S D T +W + D+G P +L +V ++++
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 562 HPLEAQTL 539
HP+ L
Sbjct: 138 HPVANNVL 145
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/78 (20%), Positives = 38/78 (48%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH++ V ++W+ +VL + +N + +W++ G ++ D++ S++F+ +
Sbjct: 127 GHQKRVNTIAWHPVANNVLLTAGGENVMFMWNVGTGEALLEISGHPDQIWSINFN-FDGS 185
Query: 544 TLAAGACDGGVRVADCRT 491
D +R+ D T
Sbjct: 186 QFVTTCKDKKIRILDSHT 203
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM-DQG------TPHTKLXYFXDKVQSVSF 563
HK +++W+ +V+AS S D T +W + D+G P +L +V ++++
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 562 HPLEAQTL 539
HP+ L
Sbjct: 138 HPVANNVL 145
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/78 (20%), Positives = 38/78 (48%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH++ V ++W+ +VL + +N + +W++ G ++ D++ S++F+ +
Sbjct: 127 GHQKRVNTIAWHPVANNVLLTAGGENVMFMWNVGTGEALLEISGHPDQIWSINFN-FDGS 185
Query: 544 TLAAGACDGGVRVADCRT 491
D +R+ D T
Sbjct: 186 QFVTTCKDKKIRILDSHT 203
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM-DQG------TPHTKLXYFXDKVQSVSF 563
HK +++W+ +V+AS S D T +W + D+G P +L +V ++++
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 562 HPLEAQTL 539
HP+ L
Sbjct: 138 HPVANNVL 145
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/78 (20%), Positives = 38/78 (48%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH++ V ++W+ +VL + +N + +W++ G ++ D++ S++F+ +
Sbjct: 127 GHQKRVNTIAWHPVANNVLLTAGGENVMFMWNVGTGEALLEISGHPDQIWSINFN-FDGS 185
Query: 544 TLAAGACDGGVRVADCRT 491
D +R+ D T
Sbjct: 186 QFVTTCKDKKIRILDSHT 203
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM-DQG------TPHTKLXYFXDKVQSVSF 563
HK +++W+ +V+AS S D T +W + D+G P +L +V ++++
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 562 HPLEAQTL 539
HP+ L
Sbjct: 138 HPVANNVL 145
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 36.7 bits (81), Expect = 0.017
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Frame = -3
Query: 676 HVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADC 497
HV + S D T LW++D + DKV S ++ + +G+ D ++ D
Sbjct: 303 HVCLASSNDKTCRLWNIDSQRLLSTFSGHTDKVSSARL--FQSHNVISGSADRTIKNWDI 360
Query: 496 RTPAAHRAWHLPPEI-ERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVT 320
+ +++ + + + VA ++ F S+ + KV + D R + ++V+ +K V+
Sbjct: 361 SSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARSSDATYSVELGQK-VS 419
Query: 319 GLILSNKVPGLMITVST-DGFMKTWDITRSGAV 224
L +S + GL + S+ D + D+ G +
Sbjct: 420 SLDIS--MDGLQVLASSRDDTLSLIDVRNYGII 450
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH V ++ +LASG D TV +W + G K +V SVSF P+ +
Sbjct: 342 GHTGQVRAITVEPERGELLASGGEDGTVRIWMIATGR-CIKTFQMDGEVTSVSFSPVADR 400
Query: 544 TLAAGACDG 518
TL A A +G
Sbjct: 401 TLLAVAYEG 409
>AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical
protein T05A8.5 protein.
Length = 378
Score = 36.3 bits (80), Expect = 0.023
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 7/172 (4%)
Frame = -3
Query: 724 GHKEAVXDL-SWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEA 548
GHK V + S N N SGS D +V +WD++ + V ++++
Sbjct: 141 GHKFGVTGVVSINEN---QFMSGSRDCSVKIWDLESAKCVRTQTINRNLVTHMAYN---G 194
Query: 547 QTLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVA-WDQLNPF--CFAMSNNEG-KVAY 380
+A + D VR+ D R + + I+ +D N F C NN+G ++
Sbjct: 195 NLVAQTSEDKSVRLWDPRNASVVTEFPRKRHIQMFCEFDGANRFFSCSNGFNNDGCEITS 254
Query: 379 VDCRQDEPLWTVQAHEKEVTGL--ILSNKVPGLMITVSTDGFMKTWDITRSG 230
D R + HE VT L + ++ L+ +VS D ++ W I G
Sbjct: 255 YDVRNPRQSREARGHEGNVTSLSIVQMDQTKRLLASVSADRQIRLWKIEEDG 306
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 35.9 bits (79), Expect = 0.030
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 12/153 (7%)
Frame = -3
Query: 724 GHKEAVXDLSWNR-----NFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFH 560
GH + + ++R +F+H+ S S D TV LW D V V++
Sbjct: 481 GHSGTLTGIEFHRASGVVDFSHLFISSSHDWTVKLWSTKDANLKFSFESHPDLVLDVAWS 540
Query: 559 PLEAQTLAAGACDGGVRV----ADCRTPAAHRAWHLPPE---IERVAWDQLNPFCFAMSN 401
P+ A+ DG + V D P A E + R+ W F + +
Sbjct: 541 PVHPAVFASIDADGNIFVWNLNEDVEGPVARLRAGAEGESVYMNRLIWSPDGKHVF-VGD 599
Query: 400 NEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSN 302
+EG+V D R E L+ +++ E +LS+
Sbjct: 600 DEGRVHMYDVR--ESLYVLKSEEWNRFARVLSD 630
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 35.1 bits (77), Expect = 0.053
Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 2/142 (1%)
Frame = -3
Query: 667 ASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGG--VRVADCR 494
A+ S D T +WD + T L +V+ + +HP + +A G+ D V++ D +
Sbjct: 233 ATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKG-LIATGSRDTQQPVKIWDPK 291
Query: 493 TPAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGL 314
+ + N + V D R + + T +AH+KEV L
Sbjct: 292 SGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISL 351
Query: 313 ILSNKVPGLMITVSTDGFMKTW 248
GL ++ DG + W
Sbjct: 352 AWHPIHEGLFVSGGGDGSIVYW 373
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDK-VQSVSFHPLEAQ 545
HK+ V L+W+ + SG D ++ W +D L + D+ + S+ +HPL
Sbjct: 344 HKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPL-GH 402
Query: 544 TLAAGACDGGVR 509
LA G+ D +
Sbjct: 403 ILATGSNDNNTK 414
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLW 632
H +A+ + W+ H+LA+GS DN W
Sbjct: 388 HDQAIWSMKWHP-LGHILATGSNDNNTKFW 416
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 35.1 bits (77), Expect = 0.053
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH V D+ + + L SGS D T+ LWD++QG + V SV+F + +
Sbjct: 67 GHNHFVSDVVISSDGQFAL-SGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF-SADNR 124
Query: 544 TLAAGACDGGVR----VADCR---TPAAHRAW 470
+ +G+ D ++ +A C+ T H W
Sbjct: 125 QIVSGSRDKSIKLWNTLAQCKYTITDDCHTDW 156
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 739 KTKRIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFH 560
KT IGH V ++ + + + + ASG D LWD+++G H D + ++SF
Sbjct: 191 KTNHIGHTGYVNTVTVSPDGS-LCASGGKDGQAMLWDLNEG-KHLYTLPGNDVINAMSFS 248
Query: 559 P 557
P
Sbjct: 249 P 249
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 34.3 bits (75), Expect = 0.093
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = -3
Query: 727 IGHKEAVXDLSW-NRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQS--VSFHP 557
+GH V +SW + + +LAS S D V +W+ QG + + + V+F P
Sbjct: 55 VGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAP 114
Query: 556 LE-AQTLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFA 410
+ LA+ + DG + + R + W + +I++ +N C+A
Sbjct: 115 HQYGLMLASASADGDIGI--LRYDNSSNEW-ISSKIQKCHEQGVNSVCWA 161
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 34.3 bits (75), Expect = 0.093
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = -3
Query: 727 IGHKEAVXDLSW-NRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQS--VSFHP 557
+GH V +SW + + +LAS S D V +W+ QG + + + V+F P
Sbjct: 55 VGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAP 114
Query: 556 LE-AQTLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFA 410
+ LA+ + DG + + R + W + +I++ +N C+A
Sbjct: 115 HQYGLMLASASADGDIGI--LRYDNSSNEW-ISSKIQKCHEQGVNSVCWA 161
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYF---XDKVQSVSFHPLE 551
H A+ D+ + S S D+T+ WD++Q T K F V+S+ F P +
Sbjct: 92 HDGAIMDVVGVPQKESQIVSISGDSTIRCWDLNQSTLDRKSQVFFGHEGSVRSICFAPDD 151
Query: 550 AQTLAAGACDGGVRVADCR 494
G D V++ D R
Sbjct: 152 PNVFVTGGRDFQVKIWDMR 170
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = -3
Query: 733 KRIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPL 554
K H++ V L W+ + +LASG DN + +W++ + P V+++++ P
Sbjct: 517 KLTNHRQEVCGLKWSPD-KQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPH 575
Query: 553 EAQTLAA--GACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQ 431
L + G D +R + T + ++ VAW +
Sbjct: 576 HHGLLVSGGGTADRCLRFWNTLTAQPMQCVDTGSQVCNVAWSK 618
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 4/147 (2%)
Frame = -3
Query: 673 VLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCR 494
+LA G+ +WD+ +L +V ++++ A T+ +G+ D + D R
Sbjct: 452 LLAVGTSRGVTQIWDVTTQKKTRELTGHSSRVGCLAWN---ADTICSGSRDRTIMHRDIR 508
Query: 493 TPAAHRAWHLPPEIERVAWDQLNPF--CFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVT 320
L + V + +P A N+ ++ + R++EP+ T H V
Sbjct: 509 CDDNDMGRKLTNHRQEVCGLKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVK 568
Query: 319 GLILSNKVPGLMIT--VSTDGFMKTWD 245
L S GL+++ + D ++ W+
Sbjct: 569 ALAWSPHHHGLLVSGGGTADRCLRFWN 595
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLW-DMDQGTPHTKLXY-FXDKVQSVSFHP 557
GHK+ V ++W+ N + ASG D V LW + +GT L Y D +Q + F+P
Sbjct: 58 GHKDLVYTVAWSHN-GELFASGGADKLVILWNEKHEGT----LRYSHTDVIQCMMFNP 110
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -3
Query: 670 LASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRT 491
+ SG+ D+ V +WD T L V SV FHP E + G+ D VR+ T
Sbjct: 202 IISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHP-ELPLIITGSEDSTVRLWHANT 260
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVS-FHPLEA 548
GH V ++ N + A+ S D TV +W P+ L V V +H E
Sbjct: 140 GHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEK 199
Query: 547 QTLAAGACDGGVRVAD 500
+ +GA D V++ D
Sbjct: 200 PYIISGADDHLVKIWD 215
Score = 31.1 bits (67), Expect = 0.87
Identities = 29/130 (22%), Positives = 54/130 (41%)
Frame = -3
Query: 604 KLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRTPAAHRAWHLPPEIERVAWDQLN 425
KL D+V+ V HP+E LAA +G V + + T +++ + R A
Sbjct: 10 KLLARSDRVKCVDLHPVETWLLAA-LYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPR 68
Query: 424 PFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWD 245
+++ + + E + +AH + L++ +P +I+ S D +K WD
Sbjct: 69 KSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLP-YVISSSDDMLVKMWD 127
Query: 244 ITRSGAVTAS 215
A+ S
Sbjct: 128 WDNKWAMKQS 137
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQ 545
GH + V + ++ ++ +GS D+TV LW + T L Y ++V + A
Sbjct: 227 GHAQNVSSVCFHPELPLII-TGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQK-GAN 284
Query: 544 TLAAGACDGGV 512
T+A G +G V
Sbjct: 285 TIAIGYDEGSV 295
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 736 TKRIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQG 617
+K H A+ L+W+ N VL SGS D+ + +WD+ G
Sbjct: 198 SKLSAHTNAITSLTWDGN-KKVLYSGSSDHLIIMWDIGGG 236
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLW-DMDQGTPHTKLXY-FXDKVQSVSFHP 557
GHK+ V ++W+ N + ASG D V LW + +GT L Y D +Q + F+P
Sbjct: 58 GHKDLVYTVAWSHN-GELFASGGADKLVILWNEKHEGT----LRYSHTDVIQCMMFNP 110
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.38
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 4/164 (2%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDK--VQSVSFHPLE 551
GH + V L W H+ S S D + LW++ Y K V+ V+F+
Sbjct: 273 GHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEV-YDRQRVVRTYAGHKLPVREVAFNNEG 331
Query: 550 AQTLAAGACDGGVRVADCRTPAAHRAWHL--PPEIERVAWDQLNPFCFAMSNNEGKVAYV 377
+ L+A + D V++ D T + +H P + D F + K+
Sbjct: 332 TEFLSA-SFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQW 390
Query: 376 DCRQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWD 245
D R E + H + V + +K T S D ++ W+
Sbjct: 391 DSRSGEIVQEYDRHLQAVNSITFFDKNRRFAST-SDDKSVRIWE 433
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
GH+ V D+ + +N +H LAS S D T+ +W++ +
Sbjct: 521 GHRRGVGDVKFAKN-SHKLASCSGDMTIKIWNISE 554
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 31.9 bits (69), Expect = 0.50
Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 22/181 (12%)
Frame = -3
Query: 721 HKEAVXDLSW-NRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFX--DKVQSVS-FHPL 554
H V W N N L +GS D T+ WDM T++ ++V + +P+
Sbjct: 129 HDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMAQIQLPERVYAADVLYPM 188
Query: 553 EAQTLAAGAC------DGGVRVADCRTPAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEG 392
LA +G V D + + + I + +Q NP FA+ + EG
Sbjct: 189 AVVALANKHIKVYNLENGPTEVKDIESQLKFQIRCI--SIFKDKSNQ-NPAGFALGSIEG 245
Query: 391 KVA--YVDCRQDEPLWTVQAHEKE--VTGL--------ILSNKVPGLMITVSTDGFMKTW 248
+VA YVD + +T + H V G I + G ++T+ +DG W
Sbjct: 246 RVAVQYVDVANPKDNFTFKCHRSAELVNGFQEIYAVNDICFHPQHGTLVTIGSDGRYSMW 305
Query: 247 D 245
D
Sbjct: 306 D 306
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = -3
Query: 346 VQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWD-------ITRSGAVTASGRAVRVGQA 188
+QA E + +I+S + +T +T T + RSG ++A RAVR G A
Sbjct: 287 LQAREILLAPMIVSQSLGRFDVTATTSCISNTLPEAPNKAPLMRSGGMSALPRAVRHGTA 346
Query: 187 LC-AALCPDAPYSVAVGG 137
LC AAL P+A + + G
Sbjct: 347 LCVAALQPEAIEPLRLSG 364
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSV-SFHPLEAQ 545
H V +SW+ + LA+GS DN+V +W+M++ + H + + SV S L
Sbjct: 535 HTAKVACVSWSPDNVR-LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET 593
Query: 544 TLAAGACDGGVR 509
T+ + D ++
Sbjct: 594 TIVSAGQDSNIK 605
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSV-SFHPLEAQ 545
H V +SW+ + LA+GS DN+V +W+M++ + H + + SV S L
Sbjct: 535 HTAKVACVSWSPDNVR-LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET 593
Query: 544 TLAAGACDGGVR 509
T+ + D ++
Sbjct: 594 TIVSAGQDSNIK 605
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = -3
Query: 727 IGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEA 548
+GH + + ++ + ++ S S D TV +W+ L V FHP E
Sbjct: 92 LGHLDYIRTTFFHHKYPWII-SASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTE- 149
Query: 547 QTLAAGACDGGVRVAD 500
+A+ + D VRV D
Sbjct: 150 DLVASASLDQTVRVWD 165
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXY---FXDKVQSVSFHPL 554
GH V ++++ +L SGS D V +W ++ T +L + V SV FHP
Sbjct: 205 GHDRGVNWVAFHHT-NPILVSGSDDRQVKIWRYNE-TKAWELDSCRGHYNNVSSVIFHP- 261
Query: 553 EAQTLAAGACDGGVRVAD 500
A + + + D +RV D
Sbjct: 262 NADLILSNSEDKSIRVWD 279
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Frame = -3
Query: 727 IGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM-------DQGTPHTKLXYFXDKVQSV 569
I +K V DL WN LA G+ + LW + ++ P + +K+ S+
Sbjct: 625 IFNKTLVTDLHWNPFDDEQLAVGTDCGQINLWRLTTNDGPRNEMEPEKIIKIGGEKITSL 684
Query: 568 SFHPLEAQTLAAGACDGGVRVAD 500
+HPL + LA + + + D
Sbjct: 685 RWHPLASDLLAVALSNSTIELWD 707
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHP 557
GH V D+ V+ + S D TV LWD+ G L + V++++ HP
Sbjct: 308 GHTNTVADVVCQSVDPQVITA-SHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHP 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 2/144 (1%)
Frame = -3
Query: 667 ASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRTP 488
ASG D + +WD+ G L V++V P L +G D V+ D
Sbjct: 200 ASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSP-RHPFLFSGGEDKQVKCWDLEYN 258
Query: 487 AAHRAWHLPPEIERVAWDQLNPFCFAMSN--NEGKVAYVDCRQDEPLWTVQAHEKEVTGL 314
R +H + V ++P + + D R + H V +
Sbjct: 259 KVIRHYH--GHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADV 316
Query: 313 ILSNKVPGLMITVSTDGFMKTWDI 242
+ + P +IT S D ++ WD+
Sbjct: 317 VCQSVDP-QVITASHDATVRLWDL 339
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHP 557
GH V D+ V+ + S D TV LWD+ G L + V++++ HP
Sbjct: 308 GHTNTVADVVCQSVDPQVITA-SHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHP 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 2/144 (1%)
Frame = -3
Query: 667 ASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRTP 488
ASG D + +WD+ G L V++V P L +G D V+ D
Sbjct: 200 ASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSP-RHPFLFSGGEDKQVKCWDLEYN 258
Query: 487 AAHRAWHLPPEIERVAWDQLNPFCFAMSN--NEGKVAYVDCRQDEPLWTVQAHEKEVTGL 314
R +H + V ++P + + D R + H V +
Sbjct: 259 KVIRHYH--GHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADV 316
Query: 313 ILSNKVPGLMITVSTDGFMKTWDI 242
+ + P +IT S D ++ WD+
Sbjct: 317 VCQSVDP-QVITASHDATVRLWDL 339
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.1 bits (67), Expect = 0.87
Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 9/172 (5%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDK---VQSVSFHPL 554
GH +A+ ++++ + + L S S D+TV LW+ G P + SV F
Sbjct: 464 GHTDAIWSVAYHSSNSR-LVSASSDSTVRLWEPGNGEPLIRTIGAPKSGILPTSVDFVST 522
Query: 553 EAQTLAAGACDGGVRVADCRTPAAHRAWHL-----PPEIERVAWDQLNPFCFAMSNNEGK 389
E L A + ++ D T + + P + ++ P + +
Sbjct: 523 ETSHLLAAYTNCYAQIIDIDTGSTVMVFDFGAVTGSPTMNKIVSHPTMPLTL-IGGEDRT 581
Query: 388 VAYVDCRQDEPLWTVQAHEKEVTGLILSNKVPGL-MITVSTDGFMKTWDITR 236
+ Y D + AH + V+ L + GL +++ S DG ++ W++ +
Sbjct: 582 IRYFDNTNGSIIHEAIAHVEGVSSLAIDPN--GLYLLSGSHDGSIRMWNMEK 631
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.1 bits (67), Expect = 0.87
Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 9/172 (5%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQGTPHTKLXYFXDK---VQSVSFHPL 554
GH +A+ ++++ + + L S S D+TV LW+ G P + SV F
Sbjct: 464 GHTDAIWSVAYHSSNSR-LVSASSDSTVRLWEPGNGEPLIRTIGAPKSGILPTSVDFVST 522
Query: 553 EAQTLAAGACDGGVRVADCRTPAAHRAWHL-----PPEIERVAWDQLNPFCFAMSNNEGK 389
E L A + ++ D T + + P + ++ P + +
Sbjct: 523 ETSHLLAAYTNCYAQIIDIDTGSTVMVFDFGAVTGSPTMNKIVSHPTMPLTL-IGGEDRT 581
Query: 388 VAYVDCRQDEPLWTVQAHEKEVTGLILSNKVPGL-MITVSTDGFMKTWDITR 236
+ Y D + AH + V+ L + GL +++ S DG ++ W++ +
Sbjct: 582 IRYFDNTNGSIIHEAIAHVEGVSSLAIDPN--GLYLLSGSHDGSIRMWNMEK 631
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/104 (17%), Positives = 42/104 (40%)
Frame = -3
Query: 643 VXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRTPAAHRAWHL 464
+ +W + TP D + + +P+E + D + V D R + +
Sbjct: 175 ISVWKPYRETPLRSYNLGTDTIHTCRANPVEENVIVGARSDRSIYVLDTRQDVPLKKVTM 234
Query: 463 PPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHE 332
+++W+ + + F +++ + + D R E VQ+H+
Sbjct: 235 KMRPNKISWNPMEAYNFTVASEDYSLYTFDMRYME--HPVQSHQ 276
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Frame = -3
Query: 727 IGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM-------DQGTPHTKLXYFXDKVQSV 569
I +K V DL WN LA G+ + LW + ++ P + +K+ S+
Sbjct: 625 IFNKTLVTDLHWNPFDDEQLAVGTDCGQINLWRLTTNDGPRNEMEPEKIIKIGGEKITSL 684
Query: 568 SFHPLEAQTLAAGACDGGVRVAD 500
+HPL + LA + + + D
Sbjct: 685 RWHPLASDLLAVALSNSTIELWD 707
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Frame = -3
Query: 727 IGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM-------DQGTPHTKLXYFXDKVQSV 569
I +K V DL WN LA G+ + LW + ++ P + +K+ S+
Sbjct: 625 IFNKTLVTDLHWNPFDDEQLAVGTDCGQINLWRLTTNDGPRNEMEPEKIIKIGGEKITSL 684
Query: 568 SFHPLEAQTLAAGACDGGVRVAD 500
+HPL + LA + + + D
Sbjct: 685 RWHPLASDLLAVALSNSTIELWD 707
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/88 (18%), Positives = 37/88 (42%)
Frame = -3
Query: 394 GKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWDITRSGAVTAS 215
G+V + + D+ + + + H+ ++T + + M+T +G M WD+ + +
Sbjct: 211 GEVMLFNVKMDKIITSFR-HDAKITNVAFRDDGESTMVTADKNGTMAVWDLEKQELI-GK 268
Query: 214 GRAVRVGQALCAALCPDAPYSVAVGGDN 131
+ + C P P ++ DN
Sbjct: 269 ITGIHSDEINCLYFVPGEPIMLSASLDN 296
>AC024779-4|AAK68484.1| 439|Caenorhabditis elegans Hypothetical
protein Y43B11AL.1 protein.
Length = 439
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +2
Query: 218 GCHRPGPCNIPGLHETICADCDHQTRHFIAQY*TCDFFFMSLYGPERFILSAINIGYFSF 397
GCH+ G C +P +TI C H F A D+ F GP LS NI S
Sbjct: 94 GCHQFGKCFVP--DDTIL--CTHHNVEFAASI-LFDYIFAIFPGPVDLKLSVCNIRNLSS 148
Query: 398 IV 403
++
Sbjct: 149 LL 150
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.6
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = -3
Query: 670 LASGSXDNTVXLWDMDQGTPHTKLXY--------FXDKVQSVSFHPLEAQTLAAGACDGG 515
L SGS D + +W+ G L Y V+ +SF +++ LA G+ DG
Sbjct: 229 LVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISF-SRDSEMLATGSIDGK 287
Query: 514 VRVADCRTPAAHRAWHL--PPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQ 341
++V T R + + V + + N + N+ V + + L ++
Sbjct: 288 IKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILS-GGNDHVVRVHGMKSGKCLKEMR 346
Query: 340 AHEKEVTGLILSNKVPGLMITVSTDGFMKTW 248
H +T + S++ +I+ STDG ++ W
Sbjct: 347 GHSSYITDVRYSDE-GNHIISCSTDGSIRVW 376
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.6
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = -3
Query: 670 LASGSXDNTVXLWDMDQGTPHTKLXY--------FXDKVQSVSFHPLEAQTLAAGACDGG 515
L SGS D + +W+ G L Y V+ +SF +++ LA G+ DG
Sbjct: 229 LVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISF-SRDSEMLATGSIDGK 287
Query: 514 VRVADCRTPAAHRAWHL--PPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQ 341
++V T R + + V + + N + N+ V + + L ++
Sbjct: 288 IKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILS-GGNDHVVRVHGMKSGKCLKEMR 346
Query: 340 AHEKEVTGLILSNKVPGLMITVSTDGFMKTW 248
H +T + S++ +I+ STDG ++ W
Sbjct: 347 GHSSYITDVRYSDE-GNHIISCSTDGSIRVW 376
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMD 623
GH+ AV +S N + T + SGS D + +W++D
Sbjct: 209 GHERAVECVSVNSDSTRAI-SGSVDTNLKIWNLD 241
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 742 KKTKRIGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQG 617
KK++ IGH+ V ++WN + T +L + S D T L+ G
Sbjct: 600 KKSEIIGHQLTVTQIAWNPSGTRLL-TVSRDRTAKLYTEKNG 640
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 727 IGHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
+GH+ V ++WN +L S D T+ +W +D+
Sbjct: 562 VGHRGHVNAVAWNPADPTMLVSCGADATIRVWSLDR 597
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDM 626
H+ + L W+ ++L SGS D TV +DM
Sbjct: 143 HERSATCLDWHATTPYILVSGSRDCTVKSYDM 174
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 127 PCCLRPPPRCKARRDTARRKGPDPHGRRGRWLSPP 231
P + PP + RR ++ K P P + R SPP
Sbjct: 308 PSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPP 342
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 346 VQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWD 245
V AHE +V + ++ L+ + DG +K WD
Sbjct: 266 VNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWD 299
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 346 VQAHEKEVTGLILSNKVPGLMITVSTDGFMKTWD 245
V AHE +V + ++ L+ + DG +K WD
Sbjct: 307 VNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWD 340
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
HK+ V L N TH+L SGS D+ V +W + +
Sbjct: 116 HKQNVCCLHINEKATHML-SGSWDSNVIIWPITE 148
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
HK+ V L N TH+L SGS D+ V +W + +
Sbjct: 116 HKQNVCCLHINEKATHML-SGSWDSNVIIWPITE 148
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
HK+ V L N TH+L SGS D+ V +W + +
Sbjct: 116 HKQNVCCLHINEKATHML-SGSWDSNVIIWPITE 148
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 721 HKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
HK+ V L N TH+L SGS D+ V +W + +
Sbjct: 116 HKQNVCCLHINEKATHML-SGSWDSNVIIWPITE 148
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Frame = -3
Query: 472 WHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVP 293
W L E + + + + C+A++ + + C D + H K G + ++
Sbjct: 401 WDLTTETKTLDLETDSQACYALAMSPDEKLLFACLADGNILIYDIHNKVKVGTLPGHQDG 460
Query: 292 GLMITVSTDG----------FMKTWDITRSGAVTASGRAVRVGQALCAALCPDAPYSVAV 143
+ +S DG ++ WD+ + V A +V C CP+ + VAV
Sbjct: 461 ASCLDLSKDGTKLWSGGLDNSVRCWDLAQRKEVAKHDFASQVFSLGC---CPNDEW-VAV 516
Query: 142 GGDNKENYLEMV 107
G +N NY+E++
Sbjct: 517 GMEN--NYVEVL 526
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Frame = -3
Query: 472 WHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVP 293
W L E + + + + C+A++ + + C D + H K G + ++
Sbjct: 401 WDLTTETKTLDLETDSQACYALAMSPDEKLLFACLADGNILIYDIHNKVKVGTLPGHQDG 460
Query: 292 GLMITVSTDG----------FMKTWDITRSGAVTASGRAVRVGQALCAALCPDAPYSVAV 143
+ +S DG ++ WD+ + V A +V C CP+ + VAV
Sbjct: 461 ASCLDLSKDGTKLWSGGLDNSVRCWDLAQRKEVAKHDFASQVFSLGC---CPNDEW-VAV 516
Query: 142 GGDNKENYLEMV 107
G +N NY+E++
Sbjct: 517 GMEN--NYVEVL 526
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Frame = -3
Query: 472 WHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVP 293
W L E + + + + C+A++ + + C D + H K G + ++
Sbjct: 401 WDLTTETKTLDLETDSQACYALAMSPDEKLLFACLADGNILIYDIHNKVKVGTLPGHQDG 460
Query: 292 GLMITVSTDG----------FMKTWDITRSGAVTASGRAVRVGQALCAALCPDAPYSVAV 143
+ +S DG ++ WD+ + V A +V C CP+ + VAV
Sbjct: 461 ASCLDLSKDGTKLWSGGLDNSVRCWDLAQRKEVAKHDFASQVFSLGC---CPNDEW-VAV 516
Query: 142 GGDNKENYLEMV 107
G +N NY+E++
Sbjct: 517 GMEN--NYVEVL 526
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Frame = -3
Query: 472 WHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLILSNKVP 293
W L E + + + + C+A++ + + C D + H K G + ++
Sbjct: 401 WDLTTETKTLDLETDSQACYALAMSPDEKLLFACLADGNILIYDIHNKVKVGTLPGHQDG 460
Query: 292 GLMITVSTDG----------FMKTWDITRSGAVTASGRAVRVGQALCAALCPDAPYSVAV 143
+ +S DG ++ WD+ + V A +V C CP+ + VAV
Sbjct: 461 ASCLDLSKDGTKLWSGGLDNSVRCWDLAQRKEVAKHDFASQVFSLGC---CPNDEW-VAV 516
Query: 142 GGDNKENYLEMV 107
G +N NY+E++
Sbjct: 517 GMEN--NYVEVL 526
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
GH+ + L++ T+ L S S D +V +WD+DQ
Sbjct: 246 GHRGPIFSLTFQLK-TNNLYSASQDRSVKMWDIDQ 279
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 724 GHKEAVXDLSWNRNFTHVLASGSXDNTVXLWDMDQ 620
GH+ + L++ T+ L S S D +V +WD+DQ
Sbjct: 246 GHRGPIFSLTFQLK-TNNLYSASQDRSVKMWDIDQ 279
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 8.1
Identities = 32/145 (22%), Positives = 53/145 (36%)
Frame = -3
Query: 670 LASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRT 491
+ SGS D TV +W G + L +V + L G+ D +RV D +
Sbjct: 309 IVSGSTDRTVKVWSTVDG---SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 365
Query: 490 PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLI 311
H A L V Q + + V + + T+ H V L+
Sbjct: 366 -GRHLA-TLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 423
Query: 310 LSNKVPGLMITVSTDGFMKTWDITR 236
++ ++ + S D ++ WD TR
Sbjct: 424 FESE-RSIVCSGSLDTSIRVWDFTR 447
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 8.1
Identities = 32/145 (22%), Positives = 53/145 (36%)
Frame = -3
Query: 670 LASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRT 491
+ SGS D TV +W G + L +V + L G+ D +RV D +
Sbjct: 311 IVSGSTDRTVKVWSTVDG---SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 367
Query: 490 PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLI 311
H A L V Q + + V + + T+ H V L+
Sbjct: 368 -GRHLA-TLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 310 LSNKVPGLMITVSTDGFMKTWDITR 236
++ ++ + S D ++ WD TR
Sbjct: 426 FESE-RSIVCSGSLDTSIRVWDFTR 449
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 142 PPPRCKARRDTARRKGPDPHGRRGRWLSPPR 234
PP +A RD R P P RR SPPR
Sbjct: 73 PPRGARADRDRPMRPSPSPPRRRRPSPSPPR 103
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 8.1
Identities = 32/145 (22%), Positives = 53/145 (36%)
Frame = -3
Query: 670 LASGSXDNTVXLWDMDQGTPHTKLXYFXDKVQSVSFHPLEAQTLAAGACDGGVRVADCRT 491
+ SGS D TV +W G + L +V + L G+ D +RV D +
Sbjct: 311 IVSGSTDRTVKVWSTVDG---SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 367
Query: 490 PAAHRAWHLPPEIERVAWDQLNPFCFAMSNNEGKVAYVDCRQDEPLWTVQAHEKEVTGLI 311
H A L V Q + + V + + T+ H V L+
Sbjct: 368 -GRHLA-TLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 310 LSNKVPGLMITVSTDGFMKTWDITR 236
++ ++ + S D ++ WD TR
Sbjct: 426 FESE-RSIVCSGSLDTSIRVWDFTR 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,603,947
Number of Sequences: 27780
Number of extensions: 292321
Number of successful extensions: 1070
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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