Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt16g02
         (920 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens ...    32   3.4  
BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein LO...    31   4.5  
BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence si...    31   4.5  
AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of ...    31   4.5  
AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA seq...    31   4.5  
AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.     31   7.8  

>AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30642 fis, clone CTONG2002965. ).
          Length = 811

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -2

Query: 874 ELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMPSTLSTSVKKNSRA 695
           E ++   NL +   +TH +L +SLV K PT    K  +S T  +S  + + +   +  + 
Sbjct: 521 EGYDNPENLKANALYTHSRLSSSLVFK-PTLPEQKEVNSCTTGSSNSTIIGSQGSETPKE 579

Query: 694 LLTVTRSVNHVLTTSRSL*QSILNLML 614
           +     +V H+  T + L +SI  L L
Sbjct: 580 VPDTPTNVQHL--TDKPLPESIPKLPL 604


>BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein
           LOC222584 protein.
          Length = 1011

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -2

Query: 874 ELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMPSTLSTSVKKNSRA 695
           E ++   NL +   +TH +L +SLV K PT    K  +S T  +S  + + +   +  + 
Sbjct: 521 EGYDNPENLKANALYTHSRLRSSLVFK-PTLPEQKEVNSCTTGSSNSTIIGSQGSETPKE 579

Query: 694 LLTVTRSVNHVLTTSRSL*QSILNLML 614
           +     +V H+  T + L +SI  L L
Sbjct: 580 VPDTPTNVQHL--TDKPLPESIPKLPL 604


>BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence
           similarity 83, member B protein.
          Length = 1011

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -2

Query: 874 ELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMPSTLSTSVKKNSRA 695
           E ++   NL +   +TH +L +SLV K PT    K  +S T  +S  + + +   +  + 
Sbjct: 521 EGYDNPENLKANALYTHSRLRSSLVFK-PTLPEQKEVNSCTTGSSNSTIIGSQGSETPKE 579

Query: 694 LLTVTRSVNHVLTTSRSL*QSILNLML 614
           +     +V H+  T + L +SI  L L
Sbjct: 580 VPDTPTNVQHL--TDKPLPESIPKLPL 604


>AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of the
           gene for a novel proteinA, member 8) protein.
          Length = 1011

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -2

Query: 874 ELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMPSTLSTSVKKNSRA 695
           E ++   NL +   +TH +L +SLV K PT    K  +S T  +S  + + +   +  + 
Sbjct: 521 EGYDNPENLKANALYTHSRLRSSLVFK-PTLPEQKEVNSCTTGSSNSTIIGSQGSETPKE 579

Query: 694 LLTVTRSVNHVLTTSRSL*QSILNLML 614
           +     +V H+  T + L +SI  L L
Sbjct: 580 VPDTPTNVQHL--TDKPLPESIPKLPL 604


>AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA
           sequence from clone RP3-523K23 on chromosome 6p12.1-12.3
            Contains the 3' end of the gene for a novel protein.
           ).
          Length = 1011

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -2

Query: 874 ELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMPSTLSTSVKKNSRA 695
           E ++   NL +   +TH +L +SLV K PT    K  +S T  +S  + + +   +  + 
Sbjct: 521 EGYDNPENLKANALYTHSRLRSSLVFK-PTLPEQKEVNSCTTGSSNSTIIGSQGSETPKE 579

Query: 694 LLTVTRSVNHVLTTSRSL*QSILNLML 614
           +     +V H+  T + L +SI  L L
Sbjct: 580 VPDTPTNVQHL--TDKPLPESIPKLPL 604


>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
          Length = 2414

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
 Frame = -1

Query: 311  PFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVL-PQYFKQPNMFFKKVLVY-- 141
            P  LF F +  +  P +S  F S    +     P+  P+L P  F+ P +  +  +++  
Sbjct: 1151 PVSLFSFQHLVQHEPGQSPEFFSTQAMSSLLSSPYSMPLLPPSLFQAPPLPLQPTVLHPG 1210

Query: 140  --HEGELFPYLFNIPHYTP 90
              H  +L P+  NIP   P
Sbjct: 1211 QLHLPQLMPHPANIPFRQP 1229


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,589,288
Number of Sequences: 237096
Number of extensions: 2619715
Number of successful extensions: 5860
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5859
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)