Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt16f19
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021368-1|AAX33516.1|  476|Drosophila melanogaster LP08963p pro...   125   9e-29
AE014134-624|AAF51095.1|  476|Drosophila melanogaster CG17593-PA...   125   9e-29
AY070664-1|AAL48135.1|  476|Drosophila melanogaster RH04607p pro...   124   2e-28

>BT021368-1|AAX33516.1|  476|Drosophila melanogaster LP08963p
           protein.
          Length = 476

 Score =  125 bits (301), Expect = 9e-29
 Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
 Frame = -2

Query: 801 VLLGVVRPNPDTLQIRIELGKDDMDPFVFCIAQKKIAAKLAREMHDLSVYCG-ERRAGER 625
           ++ G++RP  D   I+IEL +  MD FVF +  KK   KL +E  DLS +C    +  +R
Sbjct: 235 LVAGLMRPQLDQAHIKIELTRGVMDAFVFAVGTKKTITKLFKEYTDLSKFCSLVGKPEDR 294

Query: 624 LGVPGALSVVAECAEPGAALLDARVCAAXXXXXXXXXXXXLSDKYAGPKHLEETASTKPP 445
             VP    V++E  E  +A+L++R+  A            +SD+++GP   EE  + K P
Sbjct: 295 YNVPTGFGVLSEIPEATSAILESRIITALNKYQSYIDYLHISDQFSGPIQQEEGGTLKQP 354

Query: 444 ETERVMLVSLALGPDGGGDELRPLLQLVFYILDKLKRFKLSKEALAKCEKRRQKVAEAWL 265
           ET+ V+L    L      + ++PLL L+FY++++LK +++SKE  AK +K RQ+V E +L
Sbjct: 355 ETKAVLLAGFNLPKHAEMETIKPLLLLIFYLMERLKTYRMSKEGKAKSDKNRQRVEEEFL 414

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXRILAEDDP 169
                                   RILA++DP
Sbjct: 415 KSTHAARAEAAAQRREDKRKQEKERILADEDP 446


>AE014134-624|AAF51095.1|  476|Drosophila melanogaster CG17593-PA
           protein.
          Length = 476

 Score =  125 bits (301), Expect = 9e-29
 Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
 Frame = -2

Query: 801 VLLGVVRPNPDTLQIRIELGKDDMDPFVFCIAQKKIAAKLAREMHDLSVYCG-ERRAGER 625
           ++ G++RP  D   I+IEL +  MD FVF +  KK   KL +E  DLS +C    +  +R
Sbjct: 235 LVAGLMRPQLDQAHIKIELTRGVMDAFVFAVGTKKTITKLFKEYTDLSKFCSLVGKPEDR 294

Query: 624 LGVPGALSVVAECAEPGAALLDARVCAAXXXXXXXXXXXXLSDKYAGPKHLEETASTKPP 445
             VP    V++E  E  +A+L++R+  A            +SD+++GP   EE  + K P
Sbjct: 295 YNVPTGFGVLSEIPEATSAILESRIITALNKYQSYIDYLHISDQFSGPIQQEEGGTLKQP 354

Query: 444 ETERVMLVSLALGPDGGGDELRPLLQLVFYILDKLKRFKLSKEALAKCEKRRQKVAEAWL 265
           ET+ V+L    L      + ++PLL L+FY++++LK +++SKE  AK +K RQ+V E +L
Sbjct: 355 ETKAVLLAGFNLPKHAEMETIKPLLLLIFYLMERLKTYRMSKEGKAKSDKNRQRVEEEFL 414

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXRILAEDDP 169
                                   RILA++DP
Sbjct: 415 KSTHAARAEAAAQRREDKRKQEKERILADEDP 446


>AY070664-1|AAL48135.1|  476|Drosophila melanogaster RH04607p
           protein.
          Length = 476

 Score =  124 bits (298), Expect = 2e-28
 Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 1/212 (0%)
 Frame = -2

Query: 801 VLLGVVRPNPDTLQIRIELGKDDMDPFVFCIAQKKIAAKLAREMHDLSVYCG-ERRAGER 625
           ++ G++RP  D   I+IEL +  MD FVF +  KK   KL +E  DLS +C    +  +R
Sbjct: 235 LVAGLMRPQLDQAHIKIELTRGVMDAFVFAVGTKKTITKLFKEYTDLSKFCSLVGKPEDR 294

Query: 624 LGVPGALSVVAECAEPGAALLDARVCAAXXXXXXXXXXXXLSDKYAGPKHLEETASTKPP 445
             VP    V +E  E  +A+L++R+  A            +SD+++GP   EE  + K P
Sbjct: 295 YNVPTGFGVPSEIPEATSAILESRIITALNKYQSYIDYLHISDQFSGPIQQEEGGTLKQP 354

Query: 444 ETERVMLVSLALGPDGGGDELRPLLQLVFYILDKLKRFKLSKEALAKCEKRRQKVAEAWL 265
           ET+ V+L    L      + ++PLL L+FY++++LK +++SKE  AK +K RQ+V E +L
Sbjct: 355 ETKAVLLAGFNLPKHAEMETIKPLLLLIFYLMERLKTYRMSKEGKAKSDKNRQRVEEEFL 414

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXRILAEDDP 169
                                   RILA++DP
Sbjct: 415 KSTHAARAEAAAQRREDKRKQEKERILADEDP 446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,746,123
Number of Sequences: 53049
Number of extensions: 328732
Number of successful extensions: 1388
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)