Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16f03
(829 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 25 0.65
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 25 0.65
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.65
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 25 1.1
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 25 1.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.5
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 24 2.0
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 2.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 2.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 2.0
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 24 2.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 3.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 3.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 3.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 3.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 8.0
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 22 8.0
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 8.0
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 8.0
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 118 WKNL--LMLWTPGFQHYQSSRY 59
W+ L ++ WTP FQ Y+ RY
Sbjct: 219 WRKLRNIVHWTPFFQTYKKQRY 240
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 118 WKNL--LMLWTPGFQHYQSSRY 59
W+ L ++ WTP FQ Y+ RY
Sbjct: 134 WRKLRNIVHWTPFFQTYKKQRY 155
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 118 WKNL--LMLWTPGFQHYQSSRY 59
W+ L ++ WTP FQ Y+ RY
Sbjct: 453 WRKLRNIVHWTPFFQTYKKQRY 474
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 356 CGEVIWQRGLCTKGYSLCHGV 294
CG + RGL + Y +C+G+
Sbjct: 202 CGTDYFNRGLLSASYLVCYGI 222
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 356 CGEVIWQRGLCTKGYSLCHGV 294
CG + RGL + Y +C+G+
Sbjct: 78 CGTDYFNRGLLSASYLVCYGI 98
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.5
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 692 IVSKKALETVCNNDVF-YRVSLSTFQMNIKSFNFSMFKARLFVNIVEIRRFIKPTLDWLL 516
I+S + +T+ NN+ + Y + + + N + N++ +L+ NI+ I + P +
Sbjct: 314 IISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPIY 373
Query: 515 SQQFP 501
FP
Sbjct: 374 CGNFP 378
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.2 bits (50), Expect = 1.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Frame = +1
Query: 652 SLLHTVSKAFLETISPTTKI-----DDAGNDAYGL 741
++L+T+ K + I P +I DD ND YGL
Sbjct: 148 AMLYTLDKLNTQDIVPGVRIGAHILDDCDNDTYGL 182
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 422 VPLCILAYQVFEDEKY 375
VP+C L +VF ++KY
Sbjct: 9 VPVCFLLGEVFSEDKY 24
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 476 NSSNGDKLVQWCHGAPGFVPLC 411
NS DK+++WC + G + C
Sbjct: 378 NSGATDKIIRWCTWSEGDLEKC 399
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 476 NSSNGDKLVQWCHGAPGFVPLC 411
NS DK+++WC + G + C
Sbjct: 378 NSGATDKIIRWCTWSEGDLEKC 399
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 476 NSSNGDKLVQWCHGAPGFVPLC 411
NS DK+++WC + G + C
Sbjct: 378 NSGATDKIIRWCTWSEGDLEKC 399
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 422 VPLCILAYQVFEDEKY 375
VP+C L +VF ++KY
Sbjct: 9 VPVCFLLGEVFSEDKY 24
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 674 LETVCNNDVFYRVSLSTFQMNIKSFNFSMFKARLFVNIVEIRRFIKPTLD 525
LE N+D + + + +++N K FNF + IR FI P D
Sbjct: 476 LEEQRNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIGPKYD 525
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 674 LETVCNNDVFYRVSLSTFQMNIKSFNFSMFKARLFVNIVEIRRFIKPTLD 525
LE N+D + + + +++N K FNF + IR FI P D
Sbjct: 476 LEEQRNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIGPKYD 525
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.0 bits (47), Expect = 3.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 209 WCALERPGTELHRPDR 162
W +E PGT PDR
Sbjct: 645 WMIIEPPGTRFFYPDR 660
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 3.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 209 WCALERPGTELHRPDR 162
W +E PGT PDR
Sbjct: 735 WMIIEPPGTRFFYPDR 750
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -3
Query: 632 LSTFQMNIKSFNFSMFKARLFVNIVEIRRFIKPTLDWLLSQQFP 501
+S+ N K++N + +L+ NI+ I + P + FP
Sbjct: 304 ISSNNYNYKNYNNNYNSKKLYYNIINIEQIPVPVPVPIYCGNFP 347
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -3
Query: 632 LSTFQMNIKSFNFSMFKARLFVNIVEIRRFIKPTLDWLLSQQFP 501
+S+ N K++N + +L+ NI+ I + P + FP
Sbjct: 315 ISSNNYNYKNYNNNYNSKKLYYNIINIEQIPVPVPVPIYCGNFP 358
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/47 (21%), Positives = 24/47 (51%)
Frame = -3
Query: 692 IVSKKALETVCNNDVFYRVSLSTFQMNIKSFNFSMFKARLFVNIVEI 552
I+S + +T+ NN+ + + + N ++N ++ +NI +I
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNYIINIEQI 127
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 94 TPGFQHYQSSRYWRLT*KWRR 32
T F +QS RY +L WR+
Sbjct: 16 TKKFIRHQSDRYSKLKRNWRK 36
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 8.0
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = -3
Query: 623 FQMNIKSFNFSMFKARLFVNIVEIRRFIKPTLDWLLSQQFPSGNFPSSLNSSNGDKLVQW 444
F N S +F + +F+ + RF + T++ + P G + S KL +W
Sbjct: 7 FGKNFPSTSFILINYFIFLYFNSLVRFRRFTIELDKVLESPRGKYEFSKYDKLKKKLEEW 66
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 45 KNGDDTKIQPSLKEA 1
KNGD TKI P + A
Sbjct: 28 KNGDYTKIMPDILTA 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,419
Number of Sequences: 438
Number of extensions: 5883
Number of successful extensions: 31
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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