Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16f01
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 114 9e-26
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 113 2e-25
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 108 6e-24
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 107 1e-23
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 84 1e-16
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 81 7e-16
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 39 0.004
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 38 0.007
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 38 0.009
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 30 1.8
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 29 3.2
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 29 3.2
Z81592-9|CAB63315.1| 945|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81548-3|CAO82041.1| 239|Caenorhabditis elegans Hypothetical pr... 29 4.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 4.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.2
Z81548-2|CAO82040.1| 260|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 29 5.5
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 29 5.5
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 5.5
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 5.5
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 5.5
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 5.5
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 5.5
Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 7.3
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 7.3
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 28 7.3
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 28 7.3
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 28 9.7
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 114 bits (274), Expect = 9e-26
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = -2
Query: 829 LKRMIXXXXXXXXXXXXXXERVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEA 650
++RMI E+VESRNELE+YAY IK Q+ DKEKLG K+TD+DK +E A
Sbjct: 171 IERMINDADKFAADDQAQKEKVESRNELEAYAYQIKTQIADKEKLGGKLTDEDKVSIESA 230
Query: 649 LDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 536
++ AI+WL NQDA +EE K+QKK LE VVQPI++KLY
Sbjct: 231 VERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 113 bits (271), Expect = 2e-25
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = -2
Query: 829 LKRMIXXXXXXXXXXXXXXERVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEA 650
++RMI E+VESRNELE+YAY +K Q+ DKEKLG K+TD+DK +E A
Sbjct: 540 IERMINDADKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESA 599
Query: 649 LDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 536
++ AI+WL NQDA +EE K+QKK LE VVQPI++KLY
Sbjct: 600 VERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 108 bits (259), Expect = 6e-24
Identities = 50/98 (51%), Positives = 69/98 (70%)
Frame = -2
Query: 829 LKRMIXXXXXXXXXXXXXXERVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEA 650
++RMI ++ E+RNELESYAY++KNQ++DKEKLG K+ +DDK +EEA
Sbjct: 543 IERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEA 602
Query: 649 LDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 536
++ AI WL N +A +EE K+QKK LE VQPI++KLY
Sbjct: 603 VEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 107 bits (257), Expect = 1e-23
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
+ E+RNELESYAY++KNQ++DKEKLG K+ +DDK +EEA++ AI WL N +A +EE K
Sbjct: 563 KAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELK 622
Query: 589 KQKKTLEDVVQPIIAKLY 536
+QKK LE VQPI++KLY
Sbjct: 623 EQKKDLESKVQPIVSKLY 640
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/98 (39%), Positives = 63/98 (64%)
Frame = -2
Query: 829 LKRMIXXXXXXXXXXXXXXERVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEA 650
++RM+ +R+ ++N LESYA+++K ++D EKL K++ +DK K+E+
Sbjct: 516 IERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDK 574
Query: 649 LDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 536
D +KWL+ NQ AE EE++ Q+K LE + PII+KLY
Sbjct: 575 CDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 612
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 81.4 bits (192), Expect = 7e-16
Identities = 37/98 (37%), Positives = 63/98 (64%)
Frame = -2
Query: 829 LKRMIXXXXXXXXXXXXXXERVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEA 650
++RM+ +R+ ++N LESYA+++K ++D EKL K++ +DK K+E+
Sbjct: 516 IERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDK 574
Query: 649 LDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 536
D +KWL+ NQ AE EE++ Q+K LE + +P ++KLY
Sbjct: 575 CDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLY 612
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/78 (35%), Positives = 53/78 (67%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
RV++RN+LE+YA+ IK L ++ +K++ +D ++ +EA+D ++WL+ N AE +E +
Sbjct: 536 RVQARNQLEAYAFQIKQAL---DEYSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIE 592
Query: 589 KQKKTLEDVVQPIIAKLY 536
+ K L+ V Q I+ K++
Sbjct: 593 AKDKELKSVCQSILTKMH 610
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/78 (35%), Positives = 53/78 (67%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
RV++RN+LE+YA+ IK L ++ +K++ +D ++ +EA+D ++WL+ N AE +E +
Sbjct: 536 RVQARNQLEAYAFQIKQAL---DEYSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIE 592
Query: 589 KQKKTLEDVVQPIIAKLY 536
+ K L+ V Q I+ K++
Sbjct: 593 AKDKELKSVCQSILTKMH 610
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/78 (30%), Positives = 51/78 (65%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
R+ SRN+LE+YA+ +K L E+ G+ ++ +D + ++A++ ++W+E N A+ +E +
Sbjct: 536 RISSRNQLEAYAFQVKQAL---EEHGSLLSAEDAKRAKDAVEDTLRWMERNTLADKDEIE 592
Query: 589 KQKKTLEDVVQPIIAKLY 536
+ K L+ + Q I+ K++
Sbjct: 593 AKDKELKSICQDILTKMH 610
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAES--EE 596
R E+ N LE Y + +L+D E+ T+++K + E + W ED+ E+ EE
Sbjct: 650 REEAMNRLEGLLYDLAVRLEDGEEYAEYATEEEKKAILEEVAVLKLWFEDDVSLETKKEE 709
Query: 595 YKKQKKTLEDV 563
+ +++ LE++
Sbjct: 710 FDEKRAKLEEL 720
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAES--EE 596
R E+ N LE Y + +L+D E+ T+++K + E + W ED+ E+ EE
Sbjct: 666 REEAMNRLEGLLYDLAVRLEDGEEYAEYATEEEKKAILEEVAVLKLWFEDDVSLETKKEE 725
Query: 595 YKKQKKTLEDV 563
+ +++ LE++
Sbjct: 726 FDEKRAKLEEL 736
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN--QDAESEE 596
R NELES+ + L++ E + D++K K+E+++ WLED+ +D +++
Sbjct: 693 RAAVENELESFNFECSQYLEETE-FTDYMADEEKTKLEDSVKRIRAWLEDDVTKDTPTKD 751
Query: 595 YKKQKKTLEDVVQPI 551
+ L++VV+ +
Sbjct: 752 FTDNLLELKNVVRSV 766
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN-QDAESEEY 593
+ +++N LE Y Y +++++ D+ +T + L + WL D +DAE + Y
Sbjct: 573 KADAKNSLEEYVYEMRDKVSDQ--YAEFITPAAADEFRSVLTSTEDWLYDEGEDAERDVY 630
Query: 592 KKQKKTLEDVVQPIIAK 542
+K+ L+ V P++ +
Sbjct: 631 EKRLSELKAVGTPVVER 647
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 712 QDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKK 578
+DK+K K DDD + E+ K +D++D E EE +K KK
Sbjct: 273 EDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDKK 317
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2
Query: 712 QDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKK 578
+DK+K K DDD +E D K +D+ + E ++ KK+KK
Sbjct: 314 KDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDDKKKKK 358
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -2
Query: 721 NQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLED 566
N+ +DK+K D+D+ K ++ K +D+ D E E+ K+KK +D
Sbjct: 293 NKKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKD 344
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = -2
Query: 724 KNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLEDV 563
KN+++ EK+ K D+ K +E +D K ++ ++AE ++ ++++K ++V
Sbjct: 244 KNKMEMTEKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEKRRKEV 297
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = -2
Query: 745 ESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLED 566
+S A ++K + + + + + D+ +K+ EA + + +++DA S + + +KT+ D
Sbjct: 349 DSVANNVKENTESPDIISLEASGDELSKLVEAREI----ITESKDAYSTDVPESRKTVSD 404
Query: 565 VV 560
V+
Sbjct: 405 VI 406
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = -2
Query: 745 ESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLED 566
+S A ++K + + + + + D+ +K+ EA + + +++DA S + + +KT+ D
Sbjct: 349 DSVANNVKENTESPDIISLEASGDELSKLVEAREI----ITESKDAYSTDVPESRKTVSD 404
Query: 565 VV 560
V+
Sbjct: 405 VI 406
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = -2
Query: 745 ESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLED 566
+S A ++K + + + + + D+ +K+ EA + + +++DA S + + +KT+ D
Sbjct: 349 DSVANNVKENTESPDIISLEASGDELSKLVEAREI----ITESKDAYSTDVPESRKTVSD 404
Query: 565 VV 560
V+
Sbjct: 405 VI 406
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 223 IQNAHFFYRTRHTFHSHVRAQRQILDQISTL*GSSHTPTHCTHTINIHTRANNTASIVR 399
+ F + + +H+HV + + + HTP H +H+ + H + SIVR
Sbjct: 225 VHTGEHFQQWQKIYHAHVNHTSRTNEHAAVFPSHHHTPEHRSHSAD-HPKIERKDSIVR 282
>Z81592-9|CAB63315.1| 945|Caenorhabditis elegans Hypothetical
protein T16G1.9 protein.
Length = 945
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 202 NCAFVNMEIDNISRFSLPVSNRLFSHTMR 116
N FVN E+ R+ LP +NR H M+
Sbjct: 492 NYLFVNFEVRTTDRYQLPYTNRELFHMMQ 520
>Z81548-3|CAO82041.1| 239|Caenorhabditis elegans Hypothetical
protein F54F12.2b protein.
Length = 239
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 709 DKEKLGAKVT-DDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPII 548
D EK V+ DDD+ + + A I+ + +++ E ++ +++K+T ED+V +
Sbjct: 27 DLEKKSKGVSEDDDEDEKTKCKVATIRIEDHDEEVEKKKVERKKRTQEDMVADFV 81
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -2
Query: 763 ESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQ 584
ES + + A S + + K+KL A++T A + L+ K ++ +DA ++ +K+
Sbjct: 9547 ESETQKVADATSKQKETDKKQKLEAEITAKKSADEKSKLETESKLIKAAEDAAKKQKEKE 9606
Query: 583 KK 578
K
Sbjct: 9607 DK 9608
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -2
Query: 763 ESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQ 584
ES + + A S + + K+KL A++T A + L+ K ++ +DA ++ +K+
Sbjct: 9567 ESETQKVADATSKQKETDKKQKLEAEITAKKSADEKSKLETESKLIKAAEDAAKKQKEKE 9626
Query: 583 KK 578
K
Sbjct: 9627 DK 9628
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -2
Query: 757 RNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKK 578
+ E+E SI + QDK L + +DD AK A ++ + L Q+ E ++K
Sbjct: 11195 KGEVEKSELSIDMKNQDKTTLATTLLEDDLAKTTSAEESEAEHLVALQNKEKTSLAMRRK 11254
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -2
Query: 763 ESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQ 584
ES + + A S + + K+KL A++T A + L+ K ++ +DA ++ +K+
Sbjct: 9567 ESETQKVADATSKQKETDKKQKLEAEITAKKSADEKSKLETESKLIKAAEDAAKKQKEKE 9626
Query: 583 KK 578
K
Sbjct: 9627 DK 9628
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -2
Query: 757 RNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKK 578
+ E+E SI + QDK L + +DD AK A ++ + L Q+ E ++K
Sbjct: 11195 KGEVEKSELSIDMKNQDKTTLATTLLEDDLAKTTSAEESEAEHLVALQNKEKTSLAMRRK 11254
>Z81548-2|CAO82040.1| 260|Caenorhabditis elegans Hypothetical
protein F54F12.2a protein.
Length = 260
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = -2
Query: 706 KEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPII 548
K+K DDD+ + + A I+ + +++ E ++ +++K+T ED+V +
Sbjct: 50 KKKSKGVSEDDDEDEKTKCKVATIRIEDHDEEVEKKKVERKKRTQEDMVADFV 102
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = -2
Query: 751 ELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKK 578
E++ + SI+N ++EK V ++ + K+ E + +K L+ + DA+SEE K++ +
Sbjct: 270 EIKEHLNSIRNLSMEREKQHI-VNENLEKKIGEG-EETVKQLQISYDAQSEELKQRNE 325
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = -2
Query: 751 ELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKK 578
E++ + SI+N ++EK V ++ + K+ E + +K L+ + DA+SEE K++ +
Sbjct: 272 EIKEHLNSIRNLSMEREKQHI-VNENLEKKIGEG-EETVKQLQISYDAQSEELKQRNE 327
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
R + + E AY K++L EK+ V + + E ++ I WL EY
Sbjct: 530 RYKQLQKSEDMAYGYKHRL---EKVKGSVEPGKFSNLMETVEREISWLSVFPKVSPNEYM 586
Query: 589 KQKKTLEDVVQPII 548
++++ L V P +
Sbjct: 587 QRRRALRLKVYPTL 600
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
R + + E AY K++L EK+ V + + E ++ I WL EY
Sbjct: 530 RYKQLQKSEDMAYGYKHRL---EKVKGSVEPGKFSNLMETVEREISWLSVFPKVSPNEYM 586
Query: 589 KQKKTLEDVVQPII 548
++++ L V P +
Sbjct: 587 QRRRALRLKVYPTL 600
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -2
Query: 763 ESRNELESYAYSIKNQLQDKE--KLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
E+ EL+ +++ +++KE ++ + +D + LD ++ +E + + E+ K
Sbjct: 889 EAVTELQERVQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRK 948
Query: 589 KQKKTLED 566
K++KTL +
Sbjct: 949 KEQKTLNE 956
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -2
Query: 763 ESRNELESYAYSIKNQLQDKE--KLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
E+ EL+ +++ +++KE ++ + +D + LD ++ +E + + E+ K
Sbjct: 889 EAVTELQERVQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRK 948
Query: 589 KQKKTLED 566
K++KTL +
Sbjct: 949 KEQKTLNE 956
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -2
Query: 763 ESRNELESYAYSIKNQLQDKE--KLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
E+ EL+ +++ +++KE ++ + +D + LD ++ +E + + E+ K
Sbjct: 649 EAVTELQERVQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRK 708
Query: 589 KQKKTLED 566
K++KTL +
Sbjct: 709 KEQKTLNE 716
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -2
Query: 763 ESRNELESYAYSIKNQLQDKE--KLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
E+ EL+ +++ +++KE ++ + +D + LD ++ +E + + E+ K
Sbjct: 889 EAVTELQERVQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRK 948
Query: 589 KQKKTLED 566
K++KTL +
Sbjct: 949 KEQKTLNE 956
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = -2
Query: 751 ELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKK 578
E++ + SI+N ++EK V ++ + K+ E + +K L+ + DA+SEE K++ +
Sbjct: 272 EIKEHLNSIRNLSMEREKQHI-VNENLEKKIGEG-EETVKQLQISYDAQSEELKQRNE 327
>Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical
protein F32H5.4 protein.
Length = 528
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 343 CTHTINIHTRANNTASIVRGTLAAQDDRGHLCGDHVWLRFSL 468
C + + H N T + + D GH CG+ W++ S+
Sbjct: 82 CKSSFDFHNPPNCTITSKYDFYSINVDYGHFCGEGAWVKTSI 123
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -2
Query: 766 VESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKK 587
VE +N L + K L D E+ K+ + KA +E L LED Q+ + ++
Sbjct: 894 VEEKNALFLSLETEKANLADAEERNEKL-NQLKATLESKLSDITGQLEDMQERNEDLARQ 952
Query: 586 QKKTLEDV 563
+KKT +++
Sbjct: 953 KKKTDQEL 960
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -2
Query: 766 VESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKK 587
VE +N L + K L D E+ K+ + KA +E L LED Q+ + ++
Sbjct: 894 VEEKNALFLSLETEKANLADAEERNEKL-NQLKATLESKLSDITGQLEDMQERNEDLARQ 952
Query: 586 QKKTLEDV 563
+KKT +++
Sbjct: 953 KKKTDQEL 960
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -2
Query: 739 YAYSIKNQLQDKE-KLGAKVTDDDKA---KMEEALDAAIKWLEDNQDAESEEYKKQKKTL 572
Y IK +QDK KL + D+ + K+E+ L+ I + + + E+ KK++ L
Sbjct: 848 YESQIKKMVQDKTVKLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTAL 907
Query: 571 ED 566
E+
Sbjct: 908 EE 909
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -2
Query: 739 YAYSIKNQLQDKE-KLGAKVTDDDKA---KMEEALDAAIKWLEDNQDAESEEYKKQKKTL 572
Y IK +QDK KL + D+ + K+E+ L+ I + + + E+ KK++ L
Sbjct: 848 YESQIKKMVQDKTVKLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTAL 907
Query: 571 ED 566
E+
Sbjct: 908 EE 909
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = -2
Query: 769 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYK 590
RV S N + A LQ+K + K D+ K+ +A ++ +D + +K
Sbjct: 216 RVASENSRATGAVQEAQVLQEKLQQALKALDEKTTKLTTQENAHKLRMDQFEDDTKKRHK 275
Query: 589 KQKKTLE 569
K+ K LE
Sbjct: 276 KEIKALE 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,177,266
Number of Sequences: 27780
Number of extensions: 316324
Number of successful extensions: 1136
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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