Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt16e21
         (285 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation...    28   4.8  
CR533511-1|CAG38542.1|  344|Homo sapiens ZDHHC4 protein.               28   6.3  
BC001239-1|AAH01239.1|  344|Homo sapiens ZDHHC4 protein protein.       28   6.3  
AY359090-1|AAQ89448.1|  344|Homo sapiens ZDHHC4 protein.               28   6.3  
AK223532-1|BAD97252.1|  344|Homo sapiens zinc finger, DHHC domai...    28   6.3  
AK001341-1|BAA91636.1|  344|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AF201931-1|AAF86867.1|  344|Homo sapiens DC1 protein.                  28   6.3  
AK128048-1|BAC87250.1|  198|Homo sapiens protein ( Homo sapiens ...    27   8.3  

>BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation
           factor 1 protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -3

Query: 253 RGRRCCNIWHWGSVD-SISGSRARF-QLSGNSGRKHSRC 143
           RGR    +W WGS +    G RA   +L  NSG K   C
Sbjct: 411 RGRGTGRLWRWGSKERRACGVRAMLPRLVSNSGLKRPSC 449


>CR533511-1|CAG38542.1|  344|Homo sapiens ZDHHC4 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 157 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 65
           K+ RC T  LRK +  +HC   + C H   H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177


>BC001239-1|AAH01239.1|  344|Homo sapiens ZDHHC4 protein protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 157 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 65
           K+ RC T  LRK +  +HC   + C H   H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177


>AY359090-1|AAQ89448.1|  344|Homo sapiens ZDHHC4 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 157 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 65
           K+ RC T  LRK +  +HC   + C H   H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177


>AK223532-1|BAD97252.1|  344|Homo sapiens zinc finger, DHHC domain
           containing 4 variant protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 157 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 65
           K+ RC T  LRK +  +HC   + C H   H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177


>AK001341-1|BAA91636.1|  344|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10479 fis, clone NT2RP2000120. ).
          Length = 344

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 157 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 65
           K+ RC T  LRK +  +HC   + C H   H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177


>AF201931-1|AAF86867.1|  344|Homo sapiens DC1 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 157 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 65
           K+ RC T  LRK +  +HC   + C H   H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177


>AK128048-1|BAC87250.1|  198|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46168 fis, clone TESTI4003279. ).
          Length = 198

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 133 ILRKFSGRQHCVTVDCCCHGS 71
           +LR+  G QH     CCCH S
Sbjct: 55  VLRQPLGTQHPTQASCCCHTS 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,706,670
Number of Sequences: 237096
Number of extensions: 820589
Number of successful extensions: 1448
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)