Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt16e21
         (285 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001684-1|AAN71439.1|  271|Drosophila melanogaster RE57703p pro...    31   0.30 
AY069249-1|AAL39394.1|  271|Drosophila melanogaster GM02347p pro...    31   0.30 
AJ238252-1|CAB41432.1|  271|Drosophila melanogaster 1-acylglycer...    31   0.30 
AE014134-1520|AAF52680.2|  271|Drosophila melanogaster CG17608-P...    31   0.30 
AE014134-1519|AAN10670.1|  271|Drosophila melanogaster CG17608-P...    31   0.30 
AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p pro...    30   0.40 
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    30   0.40 
J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    26   6.5  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    26   6.5  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    26   6.5  
BT029665-1|ABL84856.1|  467|Drosophila melanogaster IP17312p pro...    26   8.6  
BT023844-1|AAZ86765.1|  582|Drosophila melanogaster IP14442p pro...    26   8.6  
AY119270-1|AAM51130.1|  582|Drosophila melanogaster SD24632p pro...    26   8.6  
AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA ...    26   8.6  
AE014134-1245|AAF52490.1|  580|Drosophila melanogaster CG4496-PA...    26   8.6  

>BT001684-1|AAN71439.1|  271|Drosophila melanogaster RE57703p
           protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 66  WGLPWQQQSTVTQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 242
           WG  +  +S  T     L   +  +Q+R C L LFP     +++ L+       HI LQ 
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195

Query: 243 RRPRLPLM 266
           + P  P++
Sbjct: 196 KSPVQPVV 203


>AY069249-1|AAL39394.1|  271|Drosophila melanogaster GM02347p
           protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 66  WGLPWQQQSTVTQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 242
           WG  +  +S  T     L   +  +Q+R C L LFP     +++ L+       HI LQ 
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195

Query: 243 RRPRLPLM 266
           + P  P++
Sbjct: 196 KSPVQPVV 203


>AJ238252-1|CAB41432.1|  271|Drosophila melanogaster
           1-acylglycerol-3-phosphate O-acyltransferaseprotein.
          Length = 271

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 66  WGLPWQQQSTVTQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 242
           WG  +  +S  T     L   +  +Q+R C L LFP     +++ L+       HI LQ 
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195

Query: 243 RRPRLPLM 266
           + P  P++
Sbjct: 196 KSPVQPVV 203


>AE014134-1520|AAF52680.2|  271|Drosophila melanogaster CG17608-PB,
           isoform B protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 66  WGLPWQQQSTVTQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 242
           WG  +  +S  T     L   +  +Q+R C L LFP     +++ L+       HI LQ 
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195

Query: 243 RRPRLPLM 266
           + P  P++
Sbjct: 196 KSPVQPVV 203


>AE014134-1519|AAN10670.1|  271|Drosophila melanogaster CG17608-PA,
           isoform A protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 66  WGLPWQQQSTVTQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 242
           WG  +  +S  T     L   +  +Q+R C L LFP     +++ L+       HI LQ 
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195

Query: 243 RRPRLPLM 266
           + P  P++
Sbjct: 196 KSPVQPVV 203


>AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p
           protein.
          Length = 870

 Score = 30.3 bits (65), Expect = 0.40
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -3

Query: 178 LSGNSGRKHSRCCTSILRKFSGRQH 104
           LSG+S   HSR  T++LRK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
           protein.
          Length = 2139

 Score = 30.3 bits (65), Expect = 0.40
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -3

Query: 178 LSGNSGRKHSRCCTSILRKFSGRQH 104
           LSG+S   HSR  T++LRK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 118 SGRQHCVTVDCCCHGSPH 65
           SGR HCV   C CH  P+
Sbjct: 572 SGRGHCVCGACECHKRPN 589


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 118 SGRQHCVTVDCCCHGSPH 65
           SGR HCV   C CH  P+
Sbjct: 572 SGRGHCVCGACECHKRPN 589


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 118 SGRQHCVTVDCCCHGSPH 65
           SGR HCV   C CH  P+
Sbjct: 572 SGRGHCVCGACECHKRPN 589


>BT029665-1|ABL84856.1|  467|Drosophila melanogaster IP17312p
           protein.
          Length = 467

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 50  ASPHGVGATMAAAVNCD 100
           A PHG+GAT  A  +C+
Sbjct: 387 AQPHGIGATNPAFADCE 403


>BT023844-1|AAZ86765.1|  582|Drosophila melanogaster IP14442p
           protein.
          Length = 582

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +3

Query: 105 CCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHRRPR 254
           C RP   R  L +  +      P S ++ R+P  E +  + H++ H R R
Sbjct: 438 CHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDR 487


>AY119270-1|AAM51130.1|  582|Drosophila melanogaster SD24632p
           protein.
          Length = 582

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +3

Query: 105 CCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHRRPR 254
           C RP   R  L +  +      P S ++ R+P  E +  + H++ H R R
Sbjct: 438 CHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDR 487


>AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA
           protein.
          Length = 1314

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 50  ASPHGVGATMAAAVNCD 100
           A PHG+GAT  A  +C+
Sbjct: 357 AQPHGIGATNPAFADCE 373


>AE014134-1245|AAF52490.1|  580|Drosophila melanogaster CG4496-PA
           protein.
          Length = 580

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +3

Query: 105 CCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHRRPR 254
           C RP   R  L +  +      P S ++ R+P  E +  + H++ H R R
Sbjct: 436 CHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDR 485


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,134,342
Number of Sequences: 53049
Number of extensions: 242338
Number of successful extensions: 544
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)