Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16e17
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 67 2e-11
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 67 2e-11
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 64 1e-10
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 64 1e-10
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 62 4e-10
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 62 4e-10
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 62 6e-10
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 62 6e-10
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 58 6e-09
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 58 6e-09
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 46 2e-05
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 46 2e-05
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 45 6e-05
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 41 0.001
U10414-10|AAA19077.1| 176|Caenorhabditis elegans Hypothetical p... 29 4.0
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 28 7.1
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 28 9.3
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 66.9 bits (156), Expect = 2e-11
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = -3
Query: 744 QLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIE 565
Q+L + Y+ N ++ I LP GL L+ L D + L + ST V V +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 564 TEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXX 385
T++ L + L LGI+ F+ ++ L + D LYVSK KA I
Sbjct: 270 TKLGLEEALQSLGIKKAFD-NDADLGNMADG---LYVSKVTHKALIEVDEEGTTAAAATV 325
Query: 384 XXXXMRCARPPSPS---FHADRPFLYFLVGAERIALFIG 277
+ ARP + F AD PFL+ L +F+G
Sbjct: 326 VSFVRKSARPSAIKPIVFQADHPFLFMLTQTNH-PIFLG 363
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 66.9 bits (156), Expect = 2e-11
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = -3
Query: 744 QLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIE 565
Q+L + Y+ N ++ I LP GL L+ L D + L + ST V V +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 564 TEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXX 385
T++ L + L LGI+ F+ ++ L + D LYVSK KA I
Sbjct: 270 TKLGLEEALQSLGIKKAFD-NDADLGNMADG---LYVSKVTHKALIEVDEEGTTAAAATV 325
Query: 384 XXXXMRCARPPSPS---FHADRPFLYFLVGAERIALFIG 277
+ ARP + F AD PFL+ L +F+G
Sbjct: 326 VSFVRKSARPSAIKPIVFQADHPFLFMLTQTNH-PIFLG 363
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 64.1 bits (149), Expect = 1e-10
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = -3
Query: 744 QLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIE 565
Q+L + Y+ N ++ I LP GL L+ L D + L + ST V V +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 564 TEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXX 385
T++ L + L LGI+ F+ ++ L + D LYVSK KA I
Sbjct: 270 TKLGLEEALQSLGIKKAFD-NDADLGNMADG---LYVSKVTHKALI-EVDEDGTVAVAAT 324
Query: 384 XXXXMRCARPPSPS--FHADRPFLYFLVGAERIALFIGQYRG 265
RC + + FHA+ PF +F++ +F+G + G
Sbjct: 325 RCSIERCRKKMKENIEFHAEHPF-FFILHHGTSYIFLGVFTG 365
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 64.1 bits (149), Expect = 1e-10
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = -3
Query: 744 QLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIE 565
Q+L + Y+ N ++ I LP GL L+ L D + L + ST V V +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 564 TEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXX 385
T++ L + L LGI+ F+ ++ L + D LYVSK KA I
Sbjct: 270 TKLGLEEALQSLGIKKAFD-NDADLGNMADG---LYVSKVTHKALI-EVDEDGTVAVAAT 324
Query: 384 XXXXMRCARPPSPS--FHADRPFLYFLVGAERIALFIGQYRG 265
RC + + FHA+ PF +F++ +F+G + G
Sbjct: 325 RCSIERCRKKMKENIEFHAEHPF-FFILHHGTSYIFLGVFTG 365
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 62.5 bits (145), Expect = 4e-10
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = -3
Query: 762 SHDLNAQLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTV 583
+ D+ Q+L + Y ++ I LP + GL L+K+ Y + L+ + S+ V V +
Sbjct: 200 TEDVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALEKINGEY-IQNLLNDLKSSYVSVQI 258
Query: 582 PKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXX 403
PKFKIE E+DL + L +GI+ IF + + L+ I D +++S + KA I
Sbjct: 259 PKFKIEKELDLKETLEAIGIKEIF-AEGADLSGIADK---VFISSGIHKAIIEVDEDGTT 314
Query: 402 XXXXXXXXXXMRCARPPSPS-FHADRPFLYFLVGAERIALFIG 277
+ P+ F AD PFL F V E LF+G
Sbjct: 315 AAAASAFKVQLEMMIMAEPTQFVADHPFL-FAVLFENHTLFLG 356
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 62.5 bits (145), Expect = 4e-10
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = -3
Query: 762 SHDLNAQLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTV 583
+ D+ Q+L + Y ++ I LP + GL L+K+ Y + L+ + S+ V V +
Sbjct: 200 TEDVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALEKINGEY-IQNLLNDLKSSYVSVQI 258
Query: 582 PKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXX 403
PKFKIE E+DL + L +GI+ IF + + L+ I D +++S + KA I
Sbjct: 259 PKFKIEKELDLKETLEAIGIKEIF-AEGADLSGIADK---VFISSGIHKAIIEVDEDGTT 314
Query: 402 XXXXXXXXXXMRCARPPSPS-FHADRPFLYFLVGAERIALFIG 277
+ P+ F AD PFL F V E LF+G
Sbjct: 315 AAAASAFKVQLEMMIMAEPTQFVADHPFL-FAVLFENHTLFLG 356
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 61.7 bits (143), Expect = 6e-10
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = -3
Query: 744 QLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIE 565
Q+L + Y+ N ++ I LP GL L+ L D + L + ST V V +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 564 TEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXX 385
T++ L + L LGI+ F+ ++ L + D LYVSK KA I
Sbjct: 270 TKLGLEEALQSLGIKKAFD-NDADLGNMADG---LYVSKVTHKALIEVDEEGTKAAAATT 325
Query: 384 XXXXMRCA---RPPSPSFHADRPFLYFLVGAERIALFIG 277
++ A F AD PF +F++ + LF+G
Sbjct: 326 VSISLKSAMFVMEEPKDFTADHPF-FFVLSKDNHPLFVG 363
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 61.7 bits (143), Expect = 6e-10
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = -3
Query: 744 QLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIE 565
Q+L + Y+ N ++ I LP GL L+ L D + L + ST V V +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 564 TEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXX 385
T++ L + L LGI+ F+ ++ L + D LYVSK KA I
Sbjct: 270 TKLGLEEALQSLGIKKAFD-NDADLGNMADG---LYVSKVTHKALIEVDEEGTKAAAATT 325
Query: 384 XXXXMRCA---RPPSPSFHADRPFLYFLVGAERIALFIG 277
++ A F AD PF +F++ + LF+G
Sbjct: 326 VSISLKSAMFVMEEPKDFTADHPF-FFVLSKDNHPLFVG 363
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 58.4 bits (135), Expect = 6e-09
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Frame = -3
Query: 789 QENNFKYGESHDLNAQLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKM 610
+ +N KY E+ Q+L + Y+ ++ I LP GL LQ L D + +
Sbjct: 207 RNSNRKYSENGQF--QVLSLPYKDTSFALSIFLPKTRFGLSEALQNL-DSVTIQQLMSNT 263
Query: 609 FSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAF 430
+T V + +PK+KIET + L + L +GI+ F ++ L+ D +Y+S+A KA
Sbjct: 264 SNTLVNIAMPKWKIETALGLNRALMAVGIEKAFT-DSADLSNFADG---IYISQAAHKAL 319
Query: 429 IXXXXXXXXXXXXXXXXXXMRCARPPSP---SFHADRPFLYFLVGAERIALFIG 277
I + P+ F AD PFL F++ + LFIG
Sbjct: 320 IEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFL-FILSKDNHPLFIG 372
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 58.4 bits (135), Expect = 6e-09
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Frame = -3
Query: 789 QENNFKYGESHDLNAQLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKM 610
+ +N KY E+ Q+L + Y+ ++ I LP GL LQ L D + +
Sbjct: 207 RNSNRKYSENGQF--QVLSLPYKDTSFALSIFLPKTRFGLSEALQNL-DSVTIQQLMSNT 263
Query: 609 FSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAF 430
+T V + +PK+KIET + L + L +GI+ F ++ L+ D +Y+S+A KA
Sbjct: 264 SNTLVNIAMPKWKIETALGLNRALMAVGIEKAFT-DSADLSNFADG---IYISQAAHKAL 319
Query: 429 IXXXXXXXXXXXXXXXXXXMRCARPPSP---SFHADRPFLYFLVGAERIALFIG 277
I + P+ F AD PFL F++ + LFIG
Sbjct: 320 IEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFL-FILSKDNHPLFIG 372
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 46.4 bits (105), Expect = 2e-05
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Frame = -3
Query: 741 LLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIET 562
+L +AY + LP N L L+KL + L T + +PKF IE
Sbjct: 209 VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNEKR-FNDLLKTKKRTFMNTQLPKFTIEK 267
Query: 561 EIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXXX 382
+++L L LGI IF+ ++ L+ + +N L +S+ V KA I
Sbjct: 268 DLNLKSHLQTLGITDIFS-DSADLSGLAEN---LKISEGVHKAIIEVNEEGTTAAAVTMM 323
Query: 381 XXXMRCARPPSP-SFHADRPFLYFLVGAERIALFIGQYRG 265
AR P +F AD PF +F + +F+G + G
Sbjct: 324 KAVPMSARMEQPVNFIADHPF-FFTITFLNHPIFVGVFNG 362
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 46.4 bits (105), Expect = 2e-05
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Frame = -3
Query: 741 LLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRVTVPKFKIET 562
+L +AY + LP N L L+KL + L T + +PKF IE
Sbjct: 209 VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNEKR-FNDLLKTKKRTFMNTQLPKFTIEK 267
Query: 561 EIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIXXXXXXXXXXXXXXX 382
+++L L LGI IF+ ++ L+ + +N L +S+ V KA I
Sbjct: 268 DLNLKSHLQTLGITDIFS-DSADLSGLAEN---LKISEGVHKAIIEVNEEGTTAAAVTMM 323
Query: 381 XXXMRCARPPSP-SFHADRPFLYFLVGAERIALFIGQYRG 265
AR P +F AD PF +F + +F+G + G
Sbjct: 324 KAVPMSARMEQPVNFIADHPF-FFTITFLNHPIFVGVFNG 362
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 45.2 bits (102), Expect = 6e-05
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = -3
Query: 780 NFKYGESHDLNAQLLEMAYEGNDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFST 601
N KY E+ Q+L + Y + M I LP E GL L+ L G EL S
Sbjct: 202 NRKYCENDKF--QVLSLPYTDSSFEMTIFLPKEQFGLAEALKTL--GTSTIQELKSNVSN 257
Query: 600 K-VRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFI 427
V V +P ++ ETEIDL L +GI I N +++ + +N +++S+ + KA I
Sbjct: 258 YLVNVQIPIWRNETEIDLNSTLQAIGITKILN-ESAYIGNFAEN---VHISEFIHKAII 312
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = -3
Query: 606 STKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFI 427
+T V + +PK+KIET + L + L +GI+ F ++ L+ D +Y+S+A KA I
Sbjct: 6 NTLVNIAMPKWKIETALGLNRGLMAVGIEKAFT-DSADLSNFADG---IYISQAAHKALI 61
Query: 426 -XXXXXXXXXXXXXXXXXXMRCARPPSP-SFHADRPFLYFLVGAERIALFIG 277
R P F AD PFL F++ + LFIG
Sbjct: 62 EVDEDGTVAAAATTISSSVGSVQRTEKPIEFTADHPFL-FILSKDNHPLFIG 112
>U10414-10|AAA19077.1| 176|Caenorhabditis elegans Hypothetical
protein F42A10.6 protein.
Length = 176
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 692 CRTKLMAWTGYCRSWPMATT*RRNWTKCS 606
C L+A + C WP T + NW +CS
Sbjct: 7 CLFALLALSSACDQWPNTTETKVNWWQCS 35
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 629 RRNWTKCSRPKCE*RCRNSRSKLRLIYFKFCPSWVFRRS 513
R NW + + K + + +Y++FCPS+++R S
Sbjct: 187 RENWDRAMKRKIGGTIDAWPTMEQFLYYQFCPSFIYRDS 225
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 764 SPYLKLFSWYIIGILTVVSV 823
S Y+ L SWY IGI+ V+ V
Sbjct: 382 STYVPLMSWYYIGIIMVIVV 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,180,411
Number of Sequences: 27780
Number of extensions: 328780
Number of successful extensions: 792
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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