Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16e16
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate de... 231 2e-60
AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein. 231 2e-60
AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate d... 231 2e-60
AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear f... 89 1e-17
BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein. 89 2e-17
BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear f... 89 2e-17
BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear f... 89 2e-17
BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA 3... 89 2e-17
AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear f... 89 2e-17
AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate de... 89 2e-17
BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding prote... 33 1.2
BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma sub... 31 4.7
AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2 ... 31 4.7
AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2 ... 31 4.7
AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase ... 31 4.7
AP001745-1|BAA95527.1| 847|Homo sapiens ZNF298 protein. 31 6.1
BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose) polym... 30 8.1
BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose) polym... 30 8.1
AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens ... 30 8.1
>BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 231 bits (565), Expect = 2e-60
Identities = 110/228 (48%), Positives = 156/228 (68%)
Frame = -2
Query: 688 SILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 509
++L ++ ++ Y G +G++ KKGSLLIDSSTIDP V K++ + G F DAPVS
Sbjct: 101 TMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVS 160
Query: 508 GGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITG 329
GGV A++ L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I+
Sbjct: 161 GGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISM 220
Query: 328 MATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNE 149
+ TAE MN+GI++GL+PK+L +LN SS R WS++ Y PVPG++ PS+ NY GGF
Sbjct: 221 IGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTT 280
Query: 148 LMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LM KDL LA A +SPI LG++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 281 LMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328
>AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein.
Length = 336
Score = 231 bits (565), Expect = 2e-60
Identities = 110/228 (48%), Positives = 156/228 (68%)
Frame = -2
Query: 688 SILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 509
++L ++ ++ Y G +G++ KKGSLLIDSSTIDP V K++ + G F DAPVS
Sbjct: 101 TMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVS 160
Query: 508 GGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITG 329
GGV A++ L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I+
Sbjct: 161 GGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISM 220
Query: 328 MATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNE 149
+ TAE MN+GI++GL+PK+L +LN SS R WS++ Y PVPG++ PS+ NY GGF
Sbjct: 221 IGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTT 280
Query: 148 LMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LM KDL LA A +SPI LG++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 281 LMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328
>AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 231 bits (565), Expect = 2e-60
Identities = 110/228 (48%), Positives = 156/228 (68%)
Frame = -2
Query: 688 SILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 509
++L ++ ++ Y G +G++ KKGSLLIDSSTIDP V K++ + G F DAPVS
Sbjct: 101 TMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVS 160
Query: 508 GGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITG 329
GGV A++ L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I+
Sbjct: 161 GGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISM 220
Query: 328 MATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNE 149
+ TAE MN+GI++GL+PK+L +LN SS R WS++ Y PVPG++ PS+ NY GGF
Sbjct: 221 IGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTT 280
Query: 148 LMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LM KDL LA A +SPI LG++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 281 LMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328
>AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear factor
n-pac protein.
Length = 547
Score = 89.4 bits (212), Expect = 1e-17
Identities = 62/258 (24%), Positives = 111/258 (43%)
Frame = -2
Query: 778 SKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVYLGKDGVVAHAKKGSLLI 599
++ A A+ G TPA + + ++ K D+ LG GV+ + G +
Sbjct: 297 NRTAEKEGARLGRTPAEVVSTCDITF----ACVSDPKAAKDLVLGPSGVLQGIRPGKCYV 352
Query: 598 DSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLK 419
D ST+D + ++ + + +G F +APVSG + + L +A G + +E +
Sbjct: 353 DMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQ 412
Query: 418 VMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSAR 239
MG F G++G+ L NM+ G AE + + G + LLD+LN
Sbjct: 413 AMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLA 472
Query: 238 SWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLY 59
S + C ++ N+ F + + KDL LA + + P P+ A A ++Y
Sbjct: 473 SIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVY 525
Query: 58 RIVQSRGYGQKDFSFVFQ 5
+ ++ D S V++
Sbjct: 526 KRAKALDQSDNDMSAVYR 543
>BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein.
Length = 484
Score = 89.0 bits (211), Expect = 2e-17
Identities = 56/222 (25%), Positives = 98/222 (44%)
Frame = -2
Query: 670 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 491
K D+ LG GV+ + G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 266 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 325
Query: 490 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 311
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 326 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 385
Query: 310 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 131
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 386 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 438
Query: 130 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 439 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 480
>BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 89.0 bits (211), Expect = 2e-17
Identities = 56/222 (25%), Positives = 98/222 (44%)
Frame = -2
Query: 670 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 491
K D+ LG GV+ + G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 490 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 311
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQTMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 310 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 131
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGRSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 130 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 89.0 bits (211), Expect = 2e-17
Identities = 56/222 (25%), Positives = 98/222 (44%)
Frame = -2
Query: 670 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 491
K D+ LG GV+ + G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 490 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 311
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 310 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 131
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 130 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA
3930401K13 gene protein.
Length = 523
Score = 89.0 bits (211), Expect = 2e-17
Identities = 56/222 (25%), Positives = 98/222 (44%)
Frame = -2
Query: 670 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 491
K D+ LG GV+ + G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 305 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 364
Query: 490 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 311
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 365 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 424
Query: 310 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 131
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 425 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 477
Query: 130 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 478 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 519
>AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac-like protein protein.
Length = 553
Score = 89.0 bits (211), Expect = 2e-17
Identities = 56/222 (25%), Positives = 98/222 (44%)
Frame = -2
Query: 670 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 491
K D+ LG GV+ + G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 490 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 311
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 310 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 131
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 130 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase-like protein HIBDL protein.
Length = 553
Score = 89.0 bits (211), Expect = 2e-17
Identities = 56/222 (25%), Positives = 98/222 (44%)
Frame = -2
Query: 670 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 491
K D+ LG GV+ + G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 490 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 311
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 310 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 131
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 130 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 5
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 560
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 450 SLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAIG--KICLGTFGSIVLESIRSDPFFA 623
S + PA A+ AF P T S P+ F+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGFA-AFGQTKPVVTPFGQVAAAGVSSNPFMT 542
Query: 624 *ATTPSLPRYTSSTTLLL 677
A T P +SST L
Sbjct: 543 GAPTGQFPTGSSSTNPFL 560
>BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma
subfamily B, 2 protein.
Length = 811
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 26 FLAVAPGLHDAVELSCDSAQWDRRTN 103
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2
short form protein protein.
Length = 811
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 26 FLAVAPGLHDAVELSCDSAQWDRRTN 103
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2
protein.
Length = 931
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 26 FLAVAPGLHDAVELSCDSAQWDRRTN 103
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase
hBr2 protein.
Length = 565
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPV 512
K S L+ S N+P+++ P+A EK LG TD PV
Sbjct: 374 KTASSLLWKSYPIANIPEELTPLASEKYLGGTDDPV 409
>AP001745-1|BAA95527.1| 847|Homo sapiens ZNF298 protein.
Length = 847
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = -1
Query: 779 FQRCTERSGQERSDASQLH-C--CSR*WSRRGRF--HIDQQ*SRARRVPGQ-RWRCGSCE 618
FQ + S RS +L C C++ +SR+ H+ + SR V G+ R+RCG+CE
Sbjct: 747 FQNSSNLSRHVRSHGDKLFKCEECAKLFSRKESLKQHVSYKHSR-NEVDGEYRYRCGTCE 805
Query: 617 K--RIASDRFEYNRSECSQTDLPYSPRERAG 531
K RI S E++ + SPR G
Sbjct: 806 KTFRIES-ALEFHNCRTGEGAGHVSPRPLCG 835
>BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 322
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 581 IYCTRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYGNDHVD-SINGCSNGVGWRHSVLGR 757
IY + +F + HN + ++ F G Y + ++ +G GW+HS+LG
Sbjct: 148 IYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGP 207
Query: 758 CVQCI 772
+ C+
Sbjct: 208 ILSCV 212
>BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 323
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 581 IYCTRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYGNDHVD-SINGCSNGVGWRHSVLGR 757
IY + +F + HN + ++ F G Y + ++ +G GW+HS+LG
Sbjct: 148 IYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGP 207
Query: 758 CVQCI 772
+ C+
Sbjct: 208 ILSCV 212
>AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ14050 fis, clone HEMBA1006796. ).
Length = 305
Score = 30.3 bits (65), Expect = 8.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 542 ERAGIHRCTCIWRSHGCSERYPGLHG 465
E+ G+HR TC +R GC+ PG G
Sbjct: 118 EQPGLHRATCGFRGLGCAPGCPGSGG 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,610,369
Number of Sequences: 237096
Number of extensions: 3422693
Number of successful extensions: 17567
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 16950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17554
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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