Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16e16
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069057-1|AAL39202.2| 345|Drosophila melanogaster GH06781p pro... 210 2e-54
AE013599-2766|AAM68444.1| 324|Drosophila melanogaster CG15093-P... 210 2e-54
AE013599-2765|AAF57639.2| 324|Drosophila melanogaster CG15093-P... 210 2e-54
AY069497-1|AAL39642.1| 602|Drosophila melanogaster LD22344p pro... 59 8e-09
AE014134-1751|AAF52846.3| 602|Drosophila melanogaster CG4747-PA... 59 8e-09
AF220178-1|AAG28589.1| 173|Drosophila melanogaster fruitless ty... 33 0.58
U72492-1|AAB92662.1| 675|Drosophila melanogaster fruitless clas... 32 0.77
AF039231-1|AAB96677.1| 776|Drosophila melanogaster fruitless cl... 32 0.77
AE014297-2529|AAN13774.1| 688|Drosophila melanogaster CG14307-P... 32 0.77
AE014297-2528|AAF55562.2| 789|Drosophila melanogaster CG14307-P... 32 0.77
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P... 29 7.2
BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p pro... 29 9.5
BT001732-1|AAN71487.1| 199|Drosophila melanogaster RE70963p pro... 29 9.5
AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-P... 29 9.5
AE014297-912|AAN13419.2| 411|Drosophila melanogaster CG33936-PD... 29 9.5
AE014297-911|AAZ52520.1| 469|Drosophila melanogaster CG33936-PC... 29 9.5
AE014297-910|AAF54361.2| 199|Drosophila melanogaster CG33936-PB... 29 9.5
AE014297-909|AAF54360.2| 199|Drosophila melanogaster CG33936-PA... 29 9.5
>AY069057-1|AAL39202.2| 345|Drosophila melanogaster GH06781p
protein.
Length = 345
Score = 210 bits (513), Expect = 2e-54
Identities = 108/261 (41%), Positives = 159/261 (60%), Gaps = 2/261 (0%)
Frame = -2
Query: 778 SKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVY--LGKDGVVAHAKKGSL 605
SK A + A G T +++L +N +V Y + DGV K ++
Sbjct: 81 SKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAIVDASYDEMTADGV----NKDTI 136
Query: 604 LIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPL 425
IDSSTI P++ K + KG F DAPVSGGV GA+ ATL FM GG + ++ +
Sbjct: 137 FIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAV 196
Query: 424 LKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSS 245
L+ MG K HCG G GQ AKL NNM++ I+ + +E MN+ ++ GL+ V +++N+S+
Sbjct: 197 LECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSST 256
Query: 244 ARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQ 65
R W++E+Y PVPG+ P+AP++R+Y GGF + L+ KDL LASG+A SPIPLG++A +
Sbjct: 257 GRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHK 316
Query: 64 LYRIVQSRGYGQKDFSFVFQL 2
+Y+ + +G G KDFS V+ L
Sbjct: 317 VYQSLCDKGLGNKDFSVVYDL 337
>AE013599-2766|AAM68444.1| 324|Drosophila melanogaster CG15093-PB,
isoform B protein.
Length = 324
Score = 210 bits (513), Expect = 2e-54
Identities = 108/261 (41%), Positives = 159/261 (60%), Gaps = 2/261 (0%)
Frame = -2
Query: 778 SKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVY--LGKDGVVAHAKKGSL 605
SK A + A G T +++L +N +V Y + DGV K ++
Sbjct: 60 SKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAIVDASYDEMTADGV----NKDTI 115
Query: 604 LIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPL 425
IDSSTI P++ K + KG F DAPVSGGV GA+ ATL FM GG + ++ +
Sbjct: 116 FIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAV 175
Query: 424 LKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSS 245
L+ MG K HCG G GQ AKL NNM++ I+ + +E MN+ ++ GL+ V +++N+S+
Sbjct: 176 LECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSST 235
Query: 244 ARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQ 65
R W++E+Y PVPG+ P+AP++R+Y GGF + L+ KDL LASG+A SPIPLG++A +
Sbjct: 236 GRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHK 295
Query: 64 LYRIVQSRGYGQKDFSFVFQL 2
+Y+ + +G G KDFS V+ L
Sbjct: 296 VYQSLCDKGLGNKDFSVVYDL 316
>AE013599-2765|AAF57639.2| 324|Drosophila melanogaster CG15093-PA,
isoform A protein.
Length = 324
Score = 210 bits (513), Expect = 2e-54
Identities = 108/261 (41%), Positives = 159/261 (60%), Gaps = 2/261 (0%)
Frame = -2
Query: 778 SKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVY--LGKDGVVAHAKKGSL 605
SK A + A G T +++L +N +V Y + DGV K ++
Sbjct: 60 SKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAIVDASYDEMTADGV----NKDTI 115
Query: 604 LIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPL 425
IDSSTI P++ K + KG F DAPVSGGV GA+ ATL FM GG + ++ +
Sbjct: 116 FIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAV 175
Query: 424 LKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSS 245
L+ MG K HCG G GQ AKL NNM++ I+ + +E MN+ ++ GL+ V +++N+S+
Sbjct: 176 LECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSST 235
Query: 244 ARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQ 65
R W++E+Y PVPG+ P+AP++R+Y GGF + L+ KDL LASG+A SPIPLG++A +
Sbjct: 236 GRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHK 295
Query: 64 LYRIVQSRGYGQKDFSFVFQL 2
+Y+ + +G G KDFS V+ L
Sbjct: 296 VYQSLCDKGLGNKDFSVVYDL 316
>AY069497-1|AAL39642.1| 602|Drosophila melanogaster LD22344p protein.
Length = 602
Score = 58.8 bits (136), Expect = 8e-09
Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 3/220 (1%)
Frame = -2
Query: 658 DVYLGKDGVVAHAK-KGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNA 482
D+ G GV+ ++ STIDP+ I + + +A + G A
Sbjct: 387 DLVFGNCGVLQLKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEG 446
Query: 481 TLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNM 302
L +AGG + FE K + F G IG+ L ++G++ + AE + +
Sbjct: 447 MLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVGLAEALAL 506
Query: 301 GIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNEL--MVKDLE 128
+ + ++D+ + +S +S P L+ D + L M +DL
Sbjct: 507 ADRFSISLNDIIDIFDLTSMKS---------PMLLAKGKEMAKGDFNPQQPLSHMQRDLR 557
Query: 127 LASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVF 8
L MA + +P+ ++ ++++ + GY + D S VF
Sbjct: 558 LVLNMAENLDQSMPVTSITNEVFKHTKRLGYSEHDSSAVF 597
>AE014134-1751|AAF52846.3| 602|Drosophila melanogaster CG4747-PA
protein.
Length = 602
Score = 58.8 bits (136), Expect = 8e-09
Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 3/220 (1%)
Frame = -2
Query: 658 DVYLGKDGVVAHAK-KGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNA 482
D+ G GV+ ++ STIDP+ I + + +A + G A
Sbjct: 387 DLVFGNCGVLQLKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEG 446
Query: 481 TLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNM 302
L +AGG + FE K + F G IG+ L ++G++ + AE + +
Sbjct: 447 MLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVGLAEALAL 506
Query: 301 GIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNEL--MVKDLE 128
+ + ++D+ + +S +S P L+ D + L M +DL
Sbjct: 507 ADRFSISLNDIIDIFDLTSMKS---------PMLLAKGKEMAKGDFNPQQPLSHMQRDLR 557
Query: 127 LASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVF 8
L MA + +P+ ++ ++++ + GY + D S VF
Sbjct: 558 LVLNMAENLDQSMPVTSITNEVFKHTKRLGYSEHDSSAVF 597
>AF220178-1|AAG28589.1| 173|Drosophila melanogaster fruitless
type-B protein.
Length = 173
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 656 RVPGQRWRCGSCEKRIASDRFEYNRSECSQTDL-PYSP 546
R PG WRC SC K + ++R+ + S +Q + PY P
Sbjct: 109 RDPGTMWRCRSCGKEV-TNRWHHFHSHAAQRSMCPYCP 145
>U72492-1|AAB92662.1| 675|Drosophila melanogaster fruitless class I
female isoform protein.
Length = 675
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 656 RVPGQRWRCGSCEKRIASDRFEYNRSECSQTDL-PYSP 546
R PG WRC SC K + ++R+ + S +Q + PY P
Sbjct: 611 RDPGTMWRCRSCGKEV-TNRWHHFHSHTAQRSMCPYCP 647
>AF039231-1|AAB96677.1| 776|Drosophila melanogaster fruitless class
I male isoform protein.
Length = 776
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 656 RVPGQRWRCGSCEKRIASDRFEYNRSECSQTDL-PYSP 546
R PG WRC SC K + ++R+ + S +Q + PY P
Sbjct: 712 RDPGTMWRCRSCGKEV-TNRWHHFHSHTAQRSMCPYCP 748
>AE014297-2529|AAN13774.1| 688|Drosophila melanogaster CG14307-PF,
isoform F protein.
Length = 688
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 656 RVPGQRWRCGSCEKRIASDRFEYNRSECSQTDL-PYSP 546
R PG WRC SC K + ++R+ + S +Q + PY P
Sbjct: 624 RDPGTMWRCRSCGKEV-TNRWHHFHSHTAQRSMCPYCP 660
>AE014297-2528|AAF55562.2| 789|Drosophila melanogaster CG14307-PB,
isoform B protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 656 RVPGQRWRCGSCEKRIASDRFEYNRSECSQTDL-PYSP 546
R PG WRC SC K + ++R+ + S +Q + PY P
Sbjct: 725 RDPGTMWRCRSCGKEV-TNRWHHFHSHTAQRSMCPYCP 761
>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
protein.
Length = 2695
Score = 29.1 bits (62), Expect = 7.2
Identities = 31/100 (31%), Positives = 44/100 (44%)
Frame = +3
Query: 255 FSTSNRTFGSSPILMPMFMHSAVAIPVMPINMLLVSLATCPEPICPQWNCLAPITLRRGR 434
F+T+ FG+SPI +P + +P +PI S A P PI N P T
Sbjct: 1097 FNTTTPVFGASPIQVP--QSKPLTVPTVPI----PSTAPAP-PIAGTVN--PPAT----- 1142
Query: 435 DLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAI 554
+++ PP +VA P PP PS F+RA+
Sbjct: 1143 ----TAVPPPVHIPQVAPSVPAQPPAPAPVSVPSMFNRAL 1178
>BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p
protein.
Length = 1288
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 208 GLDSTPRSTRSEPMSCSARPTEPSVRVPF*CPCSCTQL*PF 330
G D TP++ + EP +A P P+ P P S + P+
Sbjct: 563 GADQTPQALKEEPTYANALPAPPAYTAPPPVPISGVRARPY 603
>BT001732-1|AAN71487.1| 199|Drosophila melanogaster RE70963p
protein.
Length = 199
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 635 RCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 486
RCG C K++ F+ C L + + H CT +R HG E
Sbjct: 139 RCGECRKKVGLTGFQ-----CRCGGLYCAVHRYSDKHNCTFDYREHGAQE 183
>AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-PA
protein.
Length = 1288
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 208 GLDSTPRSTRSEPMSCSARPTEPSVRVPF*CPCSCTQL*PF 330
G D TP++ + EP +A P P+ P P S + P+
Sbjct: 563 GADQTPQALKEEPTYANALPAPPAYTAPPPVPISGVRARPY 603
>AE014297-912|AAN13419.2| 411|Drosophila melanogaster CG33936-PD,
isoform D protein.
Length = 411
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 635 RCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 486
RCG C K++ F+ C L + + H CT +R HG E
Sbjct: 351 RCGECRKKVGLTGFQ-----CRCGGLYCAVHRYSDKHNCTFDYREHGAQE 395
>AE014297-911|AAZ52520.1| 469|Drosophila melanogaster CG33936-PC,
isoform C protein.
Length = 469
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 635 RCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 486
RCG C K++ F+ C L + + H CT +R HG E
Sbjct: 409 RCGECRKKVGLTGFQ-----CRCGGLYCAVHRYSDKHNCTFDYREHGAQE 453
>AE014297-910|AAF54361.2| 199|Drosophila melanogaster CG33936-PB,
isoform B protein.
Length = 199
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 635 RCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 486
RCG C K++ F+ C L + + H CT +R HG E
Sbjct: 139 RCGECRKKVGLTGFQ-----CRCGGLYCAVHRYSDKHNCTFDYREHGAQE 183
>AE014297-909|AAF54360.2| 199|Drosophila melanogaster CG33936-PA,
isoform A protein.
Length = 199
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 635 RCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 486
RCG C K++ F+ C L + + H CT +R HG E
Sbjct: 139 RCGECRKKVGLTGFQ-----CRCGGLYCAVHRYSDKHNCTFDYREHGAQE 183
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,945,627
Number of Sequences: 53049
Number of extensions: 1001913
Number of successful extensions: 4526
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4484
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -