Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16e15
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 315 2e-86
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 284 6e-77
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 142 3e-34
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 112 3e-25
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 109 3e-24
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 106 2e-23
Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 102 4e-22
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 92 5e-19
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 91 9e-19
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 91 9e-19
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 91 9e-19
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 65 7e-11
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 33 0.26
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 33 0.26
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 33 0.26
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 33 0.26
Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 1.4
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 1.4
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY728060-1|AAU43721.1| 277|Caenorhabditis elegans cadmium-induc... 29 4.3
Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical pr... 29 5.7
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 28 7.5
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 7.5
Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical pr... 28 9.9
AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 315 bits (774), Expect = 2e-86
Identities = 147/242 (60%), Positives = 188/242 (77%)
Frame = -3
Query: 864 LIQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGADIKEMQNNTY 685
LI+LNRPKALNALC ++ + + D D ++ AI+ITG+E+AFAAGADIKEM NN +
Sbjct: 47 LIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTNNEF 106
Query: 684 SSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIG 505
++ FL W +S+ KP+IAAVNGFALGGG ELAM+CDIIYAGEKA+FGQPEINIG
Sbjct: 107 ATTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIG 166
Query: 504 TIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 325
TIPGAGGTQR R GKS AME+ LTGN A EA++ G+VSK+FP ++++ E +KL E+
Sbjct: 167 TIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKIFPADQVVGEAVKLGEK 226
Query: 324 IGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFK 145
I SPLIV++AK+AVN+AYE TL+ GL FE+ F+ TFAT+DRKEGMTAF EKR P ++
Sbjct: 227 IADQSPLIVQMAKEAVNKAYELTLQEGLHFERRLFHATFATKDRKEGMTAFAEKRKPQWE 286
Query: 144 NE 139
++
Sbjct: 287 SK 288
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 284 bits (696), Expect = 6e-77
Identities = 136/239 (56%), Positives = 174/239 (72%)
Frame = -3
Query: 864 LIQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGADIKEMQNNTY 685
LI LNRP ALNALC+ ++ E + D + I++TG+EKAFAAGADIKEM +
Sbjct: 15 LITLNRPSALNALCRELMLELSENLLKVEKDQSYHVIVLTGSEKAFAAGADIKEMAKLEF 74
Query: 684 SSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIG 505
+ + + W+ +S+ KP+IAAVNGFALGGG ELA++CDI+YAGE A FGQPEI IG
Sbjct: 75 ADVFENDYFTNWDTLSHITKPVIAAVNGFALGGGTELALMCDIVYAGENAIFGQPEITIG 134
Query: 504 TIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 325
TIPG GGTQR PRYV KS AMEI L+G+ A EA++ GLVSKVFPV++L+ E + LA+R
Sbjct: 135 TIPGLGGTQRWPRYVSKSVAMEICLSGDRLGAQEAKEDGLVSKVFPVQQLVGEAVLLADR 194
Query: 324 IGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNF 148
I +SPLIVK K+++N AY+T+L GL+ EK F TFAT DR+EGM+AF EKR P +
Sbjct: 195 IAKNSPLIVKTVKRSLNSAYQTSLNQGLEMEKQLFQSTFATNDRREGMSAFAEKRAPKW 253
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 142 bits (344), Expect = 3e-34
Identities = 77/218 (35%), Positives = 122/218 (55%), Gaps = 3/218 (1%)
Frame = -3
Query: 864 LIQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGN-EKAFAAGADIKEMQNNT 688
++ +NRP N+L + + + RE D +I+ + F +GAD+KE + +
Sbjct: 44 ILNMNRPAKKNSLGRVFMDQFREVLDELKYDPKTRVVILNSKCDNVFCSGADLKERKTMS 103
Query: 687 YSSNTK--QGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEI 514
T+ G + D+ +P+IAA++GFALGGG ELA+ CDI A +KAK G E
Sbjct: 104 QQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIRVASQKAKMGLVET 163
Query: 513 NIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKL 334
IPGAGG+QRL R VG +KA E++ T + +A K+G+V+ V +E+++++
Sbjct: 164 KWALIPGAGGSQRLYRIVGVAKAKELIYTAEVLNGADAAKLGVVNHVVEANP-IEKSLEI 222
Query: 333 AERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTF 220
A +I P+ VKLAK A+N +T + S L E+ +
Sbjct: 223 ARKIIPRGPIAVKLAKLAINLGSQTDITSALSVEQQCY 260
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 112 bits (270), Expect = 3e-25
Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 14/249 (5%)
Frame = -3
Query: 861 IQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGADIKE---MQNN 691
+ LNRP NAL I + Q D D +I+ G K F +G D+ E +
Sbjct: 23 VSLNRPSKFNALNMVIWKEIGDCFQLIDEDPECRVVILQGEGKHFCSGLDLSEVTFLNGE 82
Query: 690 TYSSNTKQG--------FL-REWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEK 538
+ ++G F+ +++ I C KP+I A++G+ LG ++A CD+ A +
Sbjct: 83 EADDSARRGRSILRTIKFMQKQFTYIDECSKPVILAMHGYCLGAALDIATACDVRVATKD 142
Query: 537 AKFGQPEINIGTIPGAGGTQRLPRYVGK-SKAMEIVLTGNFFDAHEAEKMGLVSKVFPV- 364
A E++IG G RLP+ VG S +I L+ F A EA + GL+S+V+
Sbjct: 143 AVLSVKEVDIGMAADVGTLNRLPKIVGNHSWIKDISLSARHFSAGEALQFGLLSRVYDTR 202
Query: 363 EKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEG 184
E+++ E +K+A+ I SP+ V+ K A+N A + T+++ L + + T+D +
Sbjct: 203 EEMINEVLKMAKLIALKSPVGVQGTKNALNYARDHTVENSLNYVATWNMSQLFTDDIMKA 262
Query: 183 MTAFVEKRP 157
A + K+P
Sbjct: 263 SMASLSKQP 271
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 109 bits (261), Expect = 3e-24
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 4/239 (1%)
Frame = -3
Query: 864 LIQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGADIKEMQNNTY 685
LI +NR N + + + + F+ DS + ++ G F AG D++ + +
Sbjct: 17 LIGINRANKKNCVNHATALQLIDAFEKFNEDSTMKTAVLYGEGGTFCAGYDLESVSKAEH 76
Query: 684 SSNTKQGFLREWE----DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPE 517
+ F ++ I KP+IAA+ GFA+ GG EL+++ D+ + AKFG
Sbjct: 77 QE-VSEDFCDKYRYMGPSIMKIKKPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFGVFC 135
Query: 516 INIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIK 337
+G GGT RLPR +G +A++++LTG A EA + GLV+++ K +EE +K
Sbjct: 136 RRVGVPLIDGGTVRLPRVIGLGRALDMILTGREVGAQEALQWGLVNRISDEGKAVEEAVK 195
Query: 336 LAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKR 160
L + I +H + + +++ + E T ++E F T + +G F+EK+
Sbjct: 196 LGKLIASHPEICMLADRESTYYSLEHTEHESFEYE---FGSTKVLAESIKGAQQFMEKQ 251
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 106 bits (254), Expect = 2e-23
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 18/258 (6%)
Frame = -3
Query: 861 IQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGADIKE------- 703
++LNRP LN + ++ D +III+G KAF AG DI
Sbjct: 39 VKLNRPAKLNTFTMDMWREFKKAIDSLADDPKCRSIIISGEGKAFCAGIDIAHGLSDILR 98
Query: 702 -MQNNTYSSNTK----QGFLREWED----ISNCGKPIIAAVNGFALGGGCELAMLCDIIY 550
+Q++T K + F+ E +D + C KPIIA+++ LG G +L CDI
Sbjct: 99 IIQDDTIEVGRKGRLVRKFIGEIQDCYTALERCPKPIIASIHSHCLGAGIDLITACDIRV 158
Query: 549 AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK-SKAMEIVLTGNFFDAHEAEKMGLVSKV 373
A + A F E+++G G R+ + VG S ++ T F A EA + GL+S++
Sbjct: 159 ASQDAIFSIREVDVGLAADIGTLNRIQKVVGNDSWTRDVAFTARDFGADEALRFGLISRI 218
Query: 372 F-PVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATED 196
+ + LLE +I +A RI SP+ V+ K+ +N A E + L F K+ + D
Sbjct: 219 YDDRQSLLENSIDMAARIAEKSPIAVQGTKETLNYAREHSTDDSLNFIKTWNMSQLLSTD 278
Query: 195 RKEGMTAFVEKRPPNFKN 142
A + K+ +++
Sbjct: 279 LLSSAMAVMNKKKATYED 296
>Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical
protein F38H4.8 protein.
Length = 283
Score = 104 bits (250), Expect = 7e-23
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Frame = -3
Query: 843 KALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG 664
K +N L ++ + D + ++II N K+F+AG ++KE+ + S +
Sbjct: 37 KKVNTLSLAMINELFAELKAIDKIEKVRSVIIAHNGKSFSAGHELKELTTESGSDKHNEI 96
Query: 663 FLR---EWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPG 493
F I N P+IA VNG A G +L CD++ AG+ +KF P +G
Sbjct: 97 FNTCGDMMNFIRNMKVPVIAEVNGTAAAAGLQLVASCDVVVAGKSSKFLVPGQKLGLFCS 156
Query: 492 AGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTH 313
G L R V + AM+++LT D+ A + GLVS+V +++ E + +AE+IG
Sbjct: 157 TPGIA-LVRAVPRKVAMDMLLTAQPIDSEAALRSGLVSRVVEDDQVKFEALNVAEQIGHF 215
Query: 312 SPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKN 142
S + L K E + ++ G +D +EG++AF+ KRP +F++
Sbjct: 216 SRSVTALGKAFFYTQAELSTVDAYRYGSRVMVGNLKLKDCQEGISAFIGKRPADFEH 272
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 102 bits (244), Expect = 4e-22
Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Frame = -3
Query: 861 IQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNE-KAFAAGADIKEMQNNTY 685
+ LNRPK NAL + + D +IA ++ TG + K + AG+D + +T
Sbjct: 17 VTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFTGGKGKYYCAGSDFSPAELSTL 76
Query: 684 SSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIG 505
+ + G+ + + KPIIA VNG A+G + + D + A + A F P +IG
Sbjct: 77 TDIQEHGYKLFVDILIAFPKPIIALVNGHAVGVSVTMLGVMDAVIAIDTATFATPFADIG 136
Query: 504 TIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 325
P A + LPR +G KA +++ F AHEA GLV+++ P ++ K+ +R
Sbjct: 137 VCPEACSSYTLPRIMGHQKAAALMMFSEKFTAHEAHIAGLVTQILPAATFEKDAKKIIDR 196
Query: 324 IGTHSPLIVKLAKQAVNQA-YETTLKSGLQFEKSTFYGTFATEDRKEGMTA 175
SP+ +K+AK+ + + L + + E+ G F+ ED +TA
Sbjct: 197 YSKLSPITMKVAKELMRTTQIKDELLTVNRKEQVHLNGMFSHEDTIARLTA 247
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 91.9 bits (218), Expect = 5e-19
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Frame = -3
Query: 834 NALCQTIVCRTREGSQ*FDADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFL 658
N L + + E +D ++ AI++ +G +F AGADI+ + ++ L
Sbjct: 54 NVLNKALFAEMNETLDRLQSDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSN-LL 112
Query: 657 REWED----ISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIP 496
RE + I KPI+AA+ G +GGG E+A+ C I +K G PE+ +G +P
Sbjct: 113 REGQKQLLTIELSQKPIVAAIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMP 172
Query: 495 GAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 373
G GGTQRLP+ +++ LTG A++A K+G+V +V
Sbjct: 173 GDGGTQRLPKLTTVQNVLDLTLTGKRIKANKAMKIGIVDRV 213
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 91.1 bits (216), Expect = 9e-19
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Frame = -3
Query: 834 NALCQTIVCRTREGSQ*FDADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFL 658
N L + + + +D +I +I++ +G +F AGADI+ ++ ++ T+
Sbjct: 80 NVLNKALFAEMKATLDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LS 138
Query: 657 REWED----ISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIP 496
RE ++ I KP++AA+ G +GGG ELA+ C I +K PE+ +G +P
Sbjct: 139 REGQEQFFRIEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLP 198
Query: 495 GAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 373
GAGGTQRLP+ +++ LTG A +A+K+G+V +V
Sbjct: 199 GAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 239
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 91.1 bits (216), Expect = 9e-19
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Frame = -3
Query: 834 NALCQTIVCRTREGSQ*FDADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFL 658
N L + + + +D +I +I++ +G +F AGADI+ ++ ++ T+
Sbjct: 54 NVLNKALFAEMKATLDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LS 112
Query: 657 REWED----ISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIP 496
RE ++ I KP++AA+ G +GGG ELA+ C I +K PE+ +G +P
Sbjct: 113 REGQEQFFRIEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLP 172
Query: 495 GAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 373
GAGGTQRLP+ +++ LTG A +A+K+G+V +V
Sbjct: 173 GAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 213
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 91.1 bits (216), Expect = 9e-19
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Frame = -3
Query: 834 NALCQTIVCRTREGSQ*FDADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFL 658
N L + + + +D +I +I++ +G +F AGADI+ ++ ++ T+
Sbjct: 80 NVLNKALFAEMKATLDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LS 138
Query: 657 REWED----ISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIP 496
RE ++ I KP++AA+ G +GGG ELA+ C I +K PE+ +G +P
Sbjct: 139 REGQEQFFRIEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLP 198
Query: 495 GAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 373
GAGGTQRLP+ +++ LTG A +A+K+G+V +V
Sbjct: 199 GAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 239
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 74.1 bits (174), Expect = 1e-13
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 9/242 (3%)
Frame = -3
Query: 861 IQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGADI---KEMQNN 691
I LNRPK NAL + ++ + + D + + +IT N + AG D+ K
Sbjct: 140 IALNRPKKFNALTLEMYQGIQKALEVSNNDKSTSITVITANGSYYCAGNDLTNFKAAAGG 199
Query: 690 TYS-----SNTKQGFLREWEDIS-NCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 529
T +NT + ++++ + N KP+IA +NG A+G + + D + A +KA F
Sbjct: 200 TKEQIADMANTAKVIMKDYVNAYINHEKPLIALINGPAVGIAVTVLGMFDYVIATDKASF 259
Query: 528 GQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLE 349
P +G P + P +G +A E++L A A+ GLV++V P +
Sbjct: 260 HTPFAPLGQSPEGVSSYTFPLIMGSLRASEMLLVCKKISAQTAKDYGLVNEVVPDAEFQS 319
Query: 348 ETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFV 169
K E P +++ K+ + ++ L E + +++ + + AF+
Sbjct: 320 HAQKTVEAFSQLPPETLRINKKLLRSLHKEKLLEVNNIEADQICERWQSKECHQAIAAFM 379
Query: 168 EK 163
K
Sbjct: 380 TK 381
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 69.3 bits (162), Expect = 3e-12
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Frame = -3
Query: 864 LIQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGN-EKAFAAGADI------- 709
++ LNRPKALNAL +V Q +++ S++ +I+ G+ +KAF AG D+
Sbjct: 23 VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRSF 82
Query: 708 KEMQNNTYSSNTKQGFLREW---EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEK 538
K+ ++ + K F E+ I K + ++G +GGGC L++ A EK
Sbjct: 83 KDSESGKECTMHKDFFREEYILNHLIGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEK 142
Query: 537 AKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVS 379
PE +G P GG+ L R G + M + LTG +A GL +
Sbjct: 143 TMLAMPETALGLFPDVGGSYFLSRLKG-NLGMYLALTGYRLLGADAFHAGLAT 194
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 69.3 bits (162), Expect = 3e-12
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Frame = -3
Query: 864 LIQLNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGN-EKAFAAGADI------- 709
++ LNRPKALNAL +V Q +++ S++ +I+ G+ +KAF AG D+
Sbjct: 46 VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRSF 105
Query: 708 KEMQNNTYSSNTKQGFLREW---EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEK 538
K+ ++ + K F E+ I K + ++G +GGGC L++ A EK
Sbjct: 106 KDSESGKECTMHKDFFREEYILNHLIGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEK 165
Query: 537 AKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVS 379
PE +G P GG+ L R G + M + LTG +A GL +
Sbjct: 166 TMLAMPETALGLFPDVGGSYFLSRLKG-NLGMYLALTGYRLLGADAFHAGLAT 217
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 64.9 bits (151), Expect = 7e-11
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Frame = -3
Query: 855 LNRPKALNALCQTIVCRTREGSQ*FDADSNIAAIIITGNEKAFAAGAD---IKEMQNNTY 685
L+RP+ N L ++ + E ++ F D N A I+++G K+F +GAD IK++ +
Sbjct: 40 LDRPEKNNCLSGEMMKQFGEHTELFSDDQN-AIIVVSGVGKSFCSGADLGLIKDISDQKL 98
Query: 684 SSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIG 505
+ + + IA ++G ALGG E+ DI A +K + +G
Sbjct: 99 GVQMFEYMSSILSLLHSSPAISIAKIHGHALGGATEICSSTDIRIAHSGSKIAFFQSKMG 158
Query: 504 TIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 325
+P GG + + +G+ +A+ + N A EA+ G V V+ E E I
Sbjct: 159 IVPSWGGAEYMEGIMGRGRALAAMGRANVMSAEEAKDQGYVDYVYKSEDEAENFINQVAS 218
Query: 324 IG 319
G
Sbjct: 219 AG 220
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 474 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 301
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 71 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 130
Query: 300 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 211
K VN Y T+ G F E + YGT
Sbjct: 131 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 162
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 474 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 301
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 103 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 162
Query: 300 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 211
K VN Y T+ G F E + YGT
Sbjct: 163 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 194
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 474 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 301
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 113 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 172
Query: 300 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 211
K VN Y T+ G F E + YGT
Sbjct: 173 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 204
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 474 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 301
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 113 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 172
Query: 300 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 211
K VN Y T+ G F E + YGT
Sbjct: 173 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 204
>Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical
protein ZK856.7 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 780 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDIS--NCGKPI 619
D D + I+ N K + +K++Q NT+ + L++WE + + GKP+
Sbjct: 26 DTDKKFSGQIVASNGKKSERWSYLKKLQKNTFQQKADECGLKDWEITTWDDAGKPV 81
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 484 ASGSGDGANVDLGLTEFRLFAGIDDIAQHCQLTTTSKSETINS-GNDGLPTV-GDVLPFT 657
A G+ + LTE L +D++ + C++ ++ +NS DGL + G + FT
Sbjct: 2162 AEGAAISKALSSALTEPELKLELDEVVRWCEMAEKEAAQNVNSLDGDGLEKLDGRLAQFT 2221
Query: 658 KE 663
KE
Sbjct: 2222 KE 2223
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 484 ASGSGDGANVDLGLTEFRLFAGIDDIAQHCQLTTTSKSETINS-GNDGLPTV-GDVLPFT 657
A G+ + LTE L +D++ + C++ ++ +NS DGL + G + FT
Sbjct: 2162 AEGAAISKALSSALTEPELKLELDEVVRWCEMAEKEAAQNVNSLDGDGLEKLDGRLAQFT 2221
Query: 658 KE 663
KE
Sbjct: 2222 KE 2223
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 484 ASGSGDGANVDLGLTEFRLFAGIDDIAQHCQLTTTSKSETINS-GNDGLPTV-GDVLPFT 657
A G+ + LTE L +D++ + C++ ++ +NS DGL + G + FT
Sbjct: 2162 AEGAAISKALSSALTEPELKLELDEVVRWCEMAEKEAAQNVNSLDGDGLEKLDGRLAQFT 2221
Query: 658 KE 663
KE
Sbjct: 2222 KE 2223
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -1
Query: 557 SSMPAKRRNSVSPRSTLAPSPE-PEAPSVF 471
SS+ + RNS+SPR +++P+ APSVF
Sbjct: 775 SSLTSNPRNSISPRRSISPTTTVRSAPSVF 804
>Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical
protein K01D12.12 protein.
Length = 277
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +1
Query: 181 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 321
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>AY728060-1|AAU43721.1| 277|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-6 protein.
Length = 277
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +1
Query: 181 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 321
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical
protein K03A11.4 protein.
Length = 664
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 403 SRENGSCQ*SIPSGKTFRRNHQAG*KDRNPLPVNCEVGQTSCEPSLRD 260
+ +N C+ + K+ RRNH G R P PV+CE + +C + +D
Sbjct: 125 TNKNLECRARCHTRKSDRRNH-IGEWMRTPGPVDCEFLEAACSENNQD 171
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 542 KRRNSVSPRSTLAPSPEPEAPSVFPDTLASRK 447
KR+ S+S + P EPE P P T SRK
Sbjct: 246 KRQASMSASAKKQPKLEPEEPEEVPSTSRSRK 277
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 405 HEHQRSFLSTRSPLLSTCQRIW 470
H H F++T+ PL +TC+ W
Sbjct: 1230 HGHPHRFIATQGPLDNTCEDFW 1251
>Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical
protein C50H2.5 protein.
Length = 265
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 462 VGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 325
+GK++A+ L GN FD+ E + G K L+E K AE+
Sbjct: 65 LGKTQAVLCFLKGNHFDSQEIIRRGFYDKRH--HAFLQELFKKAEK 108
>AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical
protein C14C6.7 protein.
Length = 509
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -1
Query: 563 AISSMPAKRRNSVSPRSTLAPSPEPEAPSVFPDTLAS--RKQWRSC*QETSLMLMKPRKW 390
A+ +MP +S ST AP+P + +FP + ++W E+ +KW
Sbjct: 58 AVETMPETSTSSFHLSSTAAPAPHSQDYQIFPQNSSDCPFEEWNQIRTESIPNTELHKKW 117
Query: 389 VLSVKYSQWKNF*KKPS 339
+ K S + K PS
Sbjct: 118 LEKWKSSFKYLYHKLPS 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,745,985
Number of Sequences: 27780
Number of extensions: 507561
Number of successful extensions: 1687
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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