Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16e05
(862 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011031-1|AAR30191.1| 703|Drosophila melanogaster RE45108p pro... 144 2e-34
AE014296-927|AAF50798.1| 703|Drosophila melanogaster CG4611-PA ... 144 2e-34
M92288-1|AAA28399.1| 2291|Drosophila melanogaster beta-spectrin ... 29 8.2
BT011160-1|AAR82828.1| 1410|Drosophila melanogaster AT24411p pro... 29 8.2
AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p pro... 29 8.2
AE014298-2596|AAF48751.1| 2291|Drosophila melanogaster CG5870-PA... 29 8.2
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 8.2
>BT011031-1|AAR30191.1| 703|Drosophila melanogaster RE45108p protein.
Length = 703
Score = 144 bits (348), Expect = 2e-34
Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 7/267 (2%)
Frame = -2
Query: 861 LLSKEINMXHXLALQEVHSLQDKFTVIGGQEDFXEEMSAYSVKPDIKTFTQMLPLLDNTT 682
LL + ++ +AL+EV ++F ++GG F E M +++ PDI+TFT ML ++ T
Sbjct: 407 LLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTN 466
Query: 681 EAENKLLHTMHNMKIRADIDFYNMLIKKRCLRLDYDXXXXXXXXXXXXXXXXXRLYPDNK 502
AE +LL + + ++ADIDF+N+LIKKR +R DY+ L PD
Sbjct: 467 AAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFDYE-----SAKEVLLMIRTAGLRPD-- 519
Query: 501 KKRLNLNIMSYGVLAMACKTKEDAEILLADMRQEQLKVNIEILGALLKHGIVNYRFDYVL 322
I++YGVLA+ C+T+E+A LL M +K+N+ ILGA+L+ G N F YV
Sbjct: 520 -------IVTYGVLALGCRTQEEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVN 572
Query: 321 YVLNIVKDEKVPVSDLFLKNLEDFNEKCMKIIQQNENSHRKYSNSFETAYNKFSKIYTNW 142
++ + +E + ++ FL++L +F+ C + I S + + +F+ ++KF Y +
Sbjct: 573 EIIQLSLEEGLKPNEAFLRHLHNFHRGCARAIDARHPSTK--TAAFKKGHSKFCDKYRLY 630
Query: 141 LRE-----VNIHEALK--QEHPWEQFK 82
E + + +A+ +E P++QFK
Sbjct: 631 YEEQGLSGLKLEDAIAKVKERPYDQFK 657
>AE014296-927|AAF50798.1| 703|Drosophila melanogaster CG4611-PA
protein.
Length = 703
Score = 144 bits (348), Expect = 2e-34
Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 7/267 (2%)
Frame = -2
Query: 861 LLSKEINMXHXLALQEVHSLQDKFTVIGGQEDFXEEMSAYSVKPDIKTFTQMLPLLDNTT 682
LL + ++ +AL+EV ++F ++GG F E M +++ PDI+TFT ML ++ T
Sbjct: 407 LLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTN 466
Query: 681 EAENKLLHTMHNMKIRADIDFYNMLIKKRCLRLDYDXXXXXXXXXXXXXXXXXRLYPDNK 502
AE +LL + + ++ADIDF+N+LIKKR +R DY+ L PD
Sbjct: 467 AAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFDYE-----SAKEVLLMIRTAGLRPD-- 519
Query: 501 KKRLNLNIMSYGVLAMACKTKEDAEILLADMRQEQLKVNIEILGALLKHGIVNYRFDYVL 322
I++YGVLA+ C+T+E+A LL M +K+N+ ILGA+L+ G N F YV
Sbjct: 520 -------IVTYGVLALGCRTQEEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVN 572
Query: 321 YVLNIVKDEKVPVSDLFLKNLEDFNEKCMKIIQQNENSHRKYSNSFETAYNKFSKIYTNW 142
++ + +E + ++ FL++L +F+ C + I S + + +F+ ++KF Y +
Sbjct: 573 EIIQLSLEEGLKPNEAFLRHLHNFHRGCARAIDARHPSTK--TAAFKKGHSKFCDKYRLY 630
Query: 141 LRE-----VNIHEALK--QEHPWEQFK 82
E + + +A+ +E P++QFK
Sbjct: 631 YEEQGLSGLKLEDAIAKVKERPYDQFK 657
>M92288-1|AAA28399.1| 2291|Drosophila melanogaster beta-spectrin
protein.
Length = 2291
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 270 LKNLEDFNEKCMKIIQQNENSHRKYSNSFETAYNKFSKIYTNWLRE--VNIHEALKQEHP 97
LKN +E + + E KY+ S + +Y I++ W R A +E
Sbjct: 1271 LKNQVKLHEFLQDLEELAEWVQEKYATSQDESYRSAKTIHSKWTRHQAFEAEIAANKERL 1330
Query: 96 WEQFKTSSPETVQRQNIK-IIEPK 28
+E K++ + ++ K +IEPK
Sbjct: 1331 FEAEKSAQELSKEKPEFKDVIEPK 1354
>BT011160-1|AAR82828.1| 1410|Drosophila melanogaster AT24411p protein.
Length = 1410
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 270 LKNLEDFNEKCMKIIQQNENSHRKYSNSFETAYNKFSKIYTNWLRE--VNIHEALKQEHP 97
LKN +E + + E KY+ S + +Y I++ W R A +E
Sbjct: 1271 LKNQVKLHEFLQDLEELAEWVQEKYATSQDESYRSAKTIHSKWTRHQAFEAEIAANKERL 1330
Query: 96 WEQFKTSSPETVQRQNIK-IIEPK 28
+E K++ + ++ K +IEPK
Sbjct: 1331 FEAEKSAQELSKEKPEFKDVIEPK 1354
>AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p
protein.
Length = 1258
Score = 29.1 bits (62), Expect = 8.2
Identities = 15/75 (20%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -2
Query: 807 SLQDK-FTVIGGQEDFXE-EMSAYSVKPDIKTFTQMLPLLDNTTEAENKLLHTMHNMKIR 634
++QD +VI E+ + + +++ ++ T++ L +N+ E++N + T K+
Sbjct: 583 NIQDSTISVIEKNEEISKGRTESEAIEEGVRNRTEVSVLQNNSNESDNSSIQTQDQHKVP 642
Query: 633 ADIDFYNMLIKKRCL 589
AD++ + ++C+
Sbjct: 643 ADLNNTKKPVTEKCV 657
>AE014298-2596|AAF48751.1| 2291|Drosophila melanogaster CG5870-PA
protein.
Length = 2291
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 270 LKNLEDFNEKCMKIIQQNENSHRKYSNSFETAYNKFSKIYTNWLRE--VNIHEALKQEHP 97
LKN +E + + E KY+ S + +Y I++ W R A +E
Sbjct: 1271 LKNQVKLHEFLQDLEELAEWVQEKYATSQDESYRSAKTIHSKWTRHQAFEAEIAANKERL 1330
Query: 96 WEQFKTSSPETVQRQNIK-IIEPK 28
+E K++ + ++ K +IEPK
Sbjct: 1331 FEAEKSAQELSKEKPEFKDVIEPK 1354
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 29.1 bits (62), Expect = 8.2
Identities = 15/75 (20%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -2
Query: 807 SLQDK-FTVIGGQEDFXE-EMSAYSVKPDIKTFTQMLPLLDNTTEAENKLLHTMHNMKIR 634
++QD +VI E+ + + +++ ++ T++ L +N+ E++N + T K+
Sbjct: 583 NIQDSTISVIEKNEEISKGRTESEAIEEGVRNRTEVSVLQNNSNESDNSSIQTQDQHKVP 642
Query: 633 ADIDFYNMLIKKRCL 589
AD++ + ++C+
Sbjct: 643 ADLNNTKKPVTEKCV 657
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,279,192
Number of Sequences: 53049
Number of extensions: 605783
Number of successful extensions: 1789
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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