Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16e05
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.90
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 2.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 2.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 2.1
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 24 2.1
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 23 2.7
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 23 3.6
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 4.8
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 4.8
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 4.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.3
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 22 6.3
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 22 8.4
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 22 8.4
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.0 bits (52), Expect = 0.90
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 219 NENSHRKYSNSFETAYNKFSKIYTN 145
N N + Y+N YN + K+Y N
Sbjct: 331 NNNYNNNYNNYNNNNYNNYKKLYYN 355
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 249 NEKCMKIIQQNENSHRKYSNSFETAYNKFSKIYTNWLREVNIHE 118
N K N N + Y+N++ N + K+Y N++ +NI +
Sbjct: 88 NYKYSNYNNYNNNYNNNYNNNYN---NNYKKLYKNYI--INIEQ 126
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 249 NEKCMKIIQQNENSHRKYSNSFETAYNKFSKIYTNWLREVNIHE 118
N K N N + Y+N++ N + K+Y N++ +NI +
Sbjct: 88 NYKYSNYNNYNNNYNNNYNNNYN---NNYKKLYKNYI--INIEQ 126
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -2
Query: 234 KIIQQNENSHRKYSNSFETAYNKFSK--IYTNWLREVNIHE 118
KII N++ +N+++ YN ++K Y N++ +NI +
Sbjct: 313 KIISSLSNNYNYNNNNYKYNYNNYNKKLYYKNYI--INIEQ 351
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 2.1
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = -2
Query: 228 IQQNENSHRKY---SNSFETAYNKFSKIYTNWLREVNIHEALKQEHPWEQFKTSSPETVQ 58
I+++EN +KY SNS + F + + RE + +E+ + K E +
Sbjct: 189 IEKSENESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY---RKKDRQYEKLH 245
Query: 57 RQNIKIIEPKRFNKR 13
+ K++E + KR
Sbjct: 246 NEKEKLLEERTSRKR 260
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 779 PITVNLSCNECTSCKAXIWXILISF 853
P +N CN CTS + I LI F
Sbjct: 58 PEVLNNHCNRCTSRQIGIANTLIPF 82
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 153 KSSRIYCKLFRKNWNICD 206
K ++YC+ KN+NI D
Sbjct: 57 KKVQLYCECILKNFNILD 74
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 480 IMSYGVLAMACKTKEDAEILLADMRQEQLKVNIEILGALLKHGIVNYRFDY 328
+ S V ++ C T D + +AD + E L V + H + + FDY
Sbjct: 185 LSSLAVQSLDCNTNSDTMVYIADEKGEGLIVYHNSDDSF--HRLTSNTFDY 233
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 480 IMSYGVLAMACKTKEDAEILLADMRQEQLKVNIEILGALLKHGIVNYRFDY 328
+ S V ++ C T D + +AD + E L V + H + + FDY
Sbjct: 185 LSSLAVQSLDCNTNSDTMVYIADEKGEGLIVYHNSDDSF--HRLTSNTFDY 233
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 480 IMSYGVLAMACKTKEDAEILLADMRQEQLKVNIEILGALLKHGIVNYRFDY 328
+ S V ++ C T D + +AD + E L V + H + + FDY
Sbjct: 185 LSSLAVQSLDCNTNSDTMVYIADEKGEGLIVYHNSDDSF--HRLTSNTFDY 233
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 6.3
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -2
Query: 234 KIIQQNENSHRKYSNSFETAYNKFSK--IYTNWLREVNIHE 118
K I N N Y+N + N ++K Y N++ +NI +
Sbjct: 88 KTIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNYI--INIEQ 126
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 510 DNKKKRLNLNIMSYGVLAMACKTKED 433
D KK+ + + L ACK K+D
Sbjct: 376 DAKKRNFFITMFDLDFLTNACKKKDD 401
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 58 LHCFWAGSLKLFPRMFLLQSFMNVYFS 138
LH W K+F + +L+ + +FS
Sbjct: 101 LHILWTSYKKVFMKDNILRQYFITFFS 127
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 58 LHCFWAGSLKLFPRMFLLQSFMNVYFS 138
LH W K+F + +L+ + +FS
Sbjct: 84 LHILWTSYKKVFMKDNILRQYFITFFS 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,551
Number of Sequences: 438
Number of extensions: 4341
Number of successful extensions: 59
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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