Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16e03
(843 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 31 0.018
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 26 0.38
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.5
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 3.5
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 23 3.5
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 3.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 4.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 4.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 6.2
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 22 8.1
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 30.7 bits (66), Expect = 0.018
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 427 LFLVFLLCMSDCLGNSSICLR-TYIKFSKMYWDGIVRTLISLNFSLRDSLECM-L*IARI 600
+ LV L CM D NS ICL +K ++ R L+ F + + + L A +
Sbjct: 278 VLLVRLACMFDAQTNSMICLNGQVLKRESIHNSSNARFLMDSMFDFAERVNSLRLSDAEL 337
Query: 601 ALFCRINIIS 630
LFC + +I+
Sbjct: 338 GLFCSVVVIA 347
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 26.2 bits (55), Expect = 0.38
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 237 HKVGMSCSLQAFQYCSNCYVIILSVKNSY 151
H++ + CSL F NC L+VK ++
Sbjct: 78 HRINLKCSLVEFSENKNCNAGSLTVKKNF 106
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = -3
Query: 394 IRYEIHSGVCLCACTTKSHMMFRTYIYIGLRKLLKNIC 281
+ Y + SG+ LC T + ++ T I G+++ C
Sbjct: 694 LSYVLLSGILLCYLVTFALVLRPTDIVCGIQRFAAGFC 731
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 608 KRAIRAIYNMHSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKQ 459
KRA M ++SL E EIK T Q +Y+ + E++ K+
Sbjct: 108 KRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLIDYPEDYGKR 157
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 608 KRAIRAIYNMHSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKQ 459
KRA M ++SL E EIK T Q +Y+ + E++ K+
Sbjct: 108 KRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLIDYPEDYGKR 157
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 608 KRAIRAIYNMHSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKQ 459
KRA M ++SL E EIK T Q +Y+ + E++ K+
Sbjct: 108 KRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLIDYPEDYGKR 157
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 4.7
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 326 SEHHVGFCCTGAQTNTRMNFV--SYVTYSSAQQACVCS*YFYYVCPTV*ETPQYVYEHTS 499
S H CC + MN V ++ + + +C+ S YY + QY+ E +S
Sbjct: 348 SRRHSDSCCLCLDS---MNAVIRNFNESENRRNSCLGSTETYYSKHNTQQFTQYIPESSS 404
Query: 500 NFQKCT 517
N Q+ T
Sbjct: 405 NLQEKT 410
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 359 RLYNKIPHDVQNLHIHR 309
RL + HD++N HI R
Sbjct: 146 RLMRCLHHDIENAHIRR 162
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 790 RSPLQFGVHCYTKK 831
R PLQFG YTK+
Sbjct: 143 RCPLQFGSFGYTKR 156
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 21.8 bits (44), Expect = 8.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 507 KNVLGWHSENFNFFKFLPQGF 569
KN +SENF FK GF
Sbjct: 42 KNSASLNSENFGIFKRALMGF 62
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,222
Number of Sequences: 438
Number of extensions: 4333
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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