Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16d14
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a, sub... 382 e-105
X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60 pr... 380 e-105
U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein. 380 e-105
BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a, sub... 380 e-105
BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a, sub... 380 e-105
AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a, sub... 380 e-105
BC071563-1|AAH71563.1| 451|Homo sapiens C1orf55 protein protein. 71 7e-12
AL133288-2|CAI22306.1| 451|Homo sapiens chromosome 1 open readi... 71 7e-12
AL133288-1|CAI22305.1| 356|Homo sapiens chromosome 1 open readi... 71 7e-12
AK127780-1|BAC87130.1| 439|Homo sapiens protein ( Homo sapiens ... 71 7e-12
AK092701-1|BAC03952.1| 356|Homo sapiens protein ( Homo sapiens ... 71 7e-12
M95971-1|AAA59919.1| 638|Homo sapiens neuroendocrine convertase... 35 0.43
J05252-1|AAA60032.1| 638|Homo sapiens endoprotease protein. 35 0.43
BC040546-1|AAH40546.1| 619|Homo sapiens PCSK2 protein protein. 35 0.43
BC005815-1|AAH05815.1| 638|Homo sapiens proprotein convertase s... 35 0.43
AL359511-3|CAC34957.2| 619|Homo sapiens proprotein convertase s... 35 0.43
AL359511-2|CAI20085.1| 638|Homo sapiens proprotein convertase s... 35 0.43
AL121779-2|CAB96732.2| 619|Homo sapiens proprotein convertase s... 35 0.43
AL121779-1|CAI19155.1| 638|Homo sapiens proprotein convertase s... 35 0.43
AL031675-2|CAA21069.2| 619|Homo sapiens proprotein convertase s... 35 0.43
AL031675-1|CAI22648.1| 638|Homo sapiens proprotein convertase s... 35 0.43
AL031664-3|CAB89428.2| 619|Homo sapiens proprotein convertase s... 35 0.43
AL031664-2|CAI21690.1| 638|Homo sapiens proprotein convertase s... 35 0.43
X16609-2|CAA34611.1| 1719|Homo sapiens alt. ankyrin (variant 2.2... 32 3.0
X16609-1|CAA34610.1| 1881|Homo sapiens protein ( Human mRNA for ... 32 3.0
U50133-1|AAB47805.1| 1856|Homo sapiens ankyrin protein. 32 3.0
M28880-1|AAA51732.1| 1880|Homo sapiens ankyrin protein. 32 3.0
AB209418-1|BAD92655.1| 1899|Homo sapiens ankyrin 1 isoform 4 var... 32 3.0
Y08402-1|CAA69678.1| 120|Homo sapiens IgM variable region protein. 31 5.3
BC035760-1|AAH35760.1| 595|Homo sapiens ZNF440 protein protein. 30 9.3
AK095252-1|BAC04510.1| 595|Homo sapiens protein ( Homo sapiens ... 30 9.3
>AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a, subunit
3 variant protein.
Length = 501
Score = 382 bits (939), Expect = e-105
Identities = 186/274 (67%), Positives = 212/274 (77%), Gaps = 4/274 (1%)
Frame = -3
Query: 822 ETGGALTNVGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGQ 643
ET ALT+ GAHLDLSAFSSWEELASLGLDRLKSAL+ALGLKCGGTLEERAQRLFSTKG+
Sbjct: 232 ETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGK 291
Query: 642 T--ALDKSLVAKKGNKAKATTQ--QRQKDIAAIEAQVYRFATIISSTRASTIENVTXXXX 475
+ +LD SL AK K+K T + +R KDIA +EAQ+Y + I+ R T ENV
Sbjct: 292 SLESLDTSLFAKNP-KSKGTKRDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQA 350
Query: 474 XXXXXXRDESGXXXXXXXXXXXXXXXDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYN 295
+E +E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+YN
Sbjct: 351 RTGEEREEEE---EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYN 407
Query: 294 CEICGNYTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKQQKE 115
CEICGNYTY+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW K+K QK
Sbjct: 408 CEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKA 467
Query: 114 TERFVAENDEEFEDSQGNVVNRKTFEDLKRQGLL 13
+ER+ + +EE+EDS GNVVNRKT+EDLKRQGLL
Sbjct: 468 SERWQPDTEEEYEDSSGNVVNRKTYEDLKRQGLL 501
>X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60
protein.
Length = 501
Score = 380 bits (936), Expect = e-105
Identities = 185/274 (67%), Positives = 212/274 (77%), Gaps = 4/274 (1%)
Frame = -3
Query: 822 ETGGALTNVGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGQ 643
ET ALT+ GAHLDLSAFSSWEELASLGLDRLKSAL+ALGLKCGGTLEERAQRLFSTKG+
Sbjct: 232 ETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGK 291
Query: 642 T--ALDKSLVAKKGNKAKATTQ--QRQKDIAAIEAQVYRFATIISSTRASTIENVTXXXX 475
+ +LD SL AK K+K T + +R KDIA +EAQ+Y + I+ R T ENV
Sbjct: 292 SLESLDTSLFAKNP-KSKGTKRDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQA 350
Query: 474 XXXXXXRDESGXXXXXXXXXXXXXXXDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYN 295
+E +E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+YN
Sbjct: 351 RTGEEREEEE---EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYN 407
Query: 294 CEICGNYTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKQQKE 115
CEICGNYTY+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW K+K QK
Sbjct: 408 CEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKA 467
Query: 114 TERFVAENDEEFEDSQGNVVNRKTFEDLKRQGLL 13
+ER+ + +EE+EDS GNVVN+KT+EDLKRQGLL
Sbjct: 468 SERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein.
Length = 501
Score = 380 bits (936), Expect = e-105
Identities = 185/274 (67%), Positives = 212/274 (77%), Gaps = 4/274 (1%)
Frame = -3
Query: 822 ETGGALTNVGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGQ 643
ET ALT+ GAHLDLSAFSSWEELASLGLDRLKSAL+ALGLKCGGTLEERAQRLFSTKG+
Sbjct: 232 ETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGK 291
Query: 642 T--ALDKSLVAKKGNKAKATTQ--QRQKDIAAIEAQVYRFATIISSTRASTIENVTXXXX 475
+ +LD SL AK K+K T + +R KDIA +EAQ+Y + I+ R T ENV
Sbjct: 292 SLESLDTSLFAKNP-KSKGTKRDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQA 350
Query: 474 XXXXXXRDESGXXXXXXXXXXXXXXXDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYN 295
+E +E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+YN
Sbjct: 351 RTGEEREEEE---EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYN 407
Query: 294 CEICGNYTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKQQKE 115
CEICGNYTY+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW K+K QK
Sbjct: 408 CEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKA 467
Query: 114 TERFVAENDEEFEDSQGNVVNRKTFEDLKRQGLL 13
+ER+ + +EE+EDS GNVVN+KT+EDLKRQGLL
Sbjct: 468 SERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a, subunit
3, 60kDa protein.
Length = 501
Score = 380 bits (936), Expect = e-105
Identities = 185/274 (67%), Positives = 212/274 (77%), Gaps = 4/274 (1%)
Frame = -3
Query: 822 ETGGALTNVGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGQ 643
ET ALT+ GAHLDLSAFSSWEELASLGLDRLKSAL+ALGLKCGGTLEERAQRLFSTKG+
Sbjct: 232 ETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGK 291
Query: 642 T--ALDKSLVAKKGNKAKATTQ--QRQKDIAAIEAQVYRFATIISSTRASTIENVTXXXX 475
+ +LD SL AK K+K T + +R KDIA +EAQ+Y + I+ R T ENV
Sbjct: 292 SLESLDTSLFAKNP-KSKGTKRDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQA 350
Query: 474 XXXXXXRDESGXXXXXXXXXXXXXXXDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYN 295
+E +E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+YN
Sbjct: 351 RTGEEREEEE---EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYN 407
Query: 294 CEICGNYTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKQQKE 115
CEICGNYTY+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW K+K QK
Sbjct: 408 CEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKA 467
Query: 114 TERFVAENDEEFEDSQGNVVNRKTFEDLKRQGLL 13
+ER+ + +EE+EDS GNVVN+KT+EDLKRQGLL
Sbjct: 468 SERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a, subunit
3, 60kDa protein.
Length = 501
Score = 380 bits (936), Expect = e-105
Identities = 185/274 (67%), Positives = 212/274 (77%), Gaps = 4/274 (1%)
Frame = -3
Query: 822 ETGGALTNVGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGQ 643
ET ALT+ GAHLDLSAFSSWEELASLGLDRLKSAL+ALGLKCGGTLEERAQRLFSTKG+
Sbjct: 232 ETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGK 291
Query: 642 T--ALDKSLVAKKGNKAKATTQ--QRQKDIAAIEAQVYRFATIISSTRASTIENVTXXXX 475
+ +LD SL AK K+K T + +R KDIA +EAQ+Y + I+ R T ENV
Sbjct: 292 SLESLDTSLFAKNP-KSKGTKRDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQA 350
Query: 474 XXXXXXRDESGXXXXXXXXXXXXXXXDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYN 295
+E +E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+YN
Sbjct: 351 RTGEEREEEE---EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYN 407
Query: 294 CEICGNYTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKQQKE 115
CEICGNYTY+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW K+K QK
Sbjct: 408 CEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKA 467
Query: 114 TERFVAENDEEFEDSQGNVVNRKTFEDLKRQGLL 13
+ER+ + +EE+EDS GNVVN+KT+EDLKRQGLL
Sbjct: 468 SERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a, subunit
3, 60kDa protein.
Length = 501
Score = 380 bits (936), Expect = e-105
Identities = 185/274 (67%), Positives = 212/274 (77%), Gaps = 4/274 (1%)
Frame = -3
Query: 822 ETGGALTNVGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGQ 643
ET ALT+ GAHLDLSAFSSWEELASLGLDRLKSAL+ALGLKCGGTLEERAQRLFSTKG+
Sbjct: 232 ETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGK 291
Query: 642 T--ALDKSLVAKKGNKAKATTQ--QRQKDIAAIEAQVYRFATIISSTRASTIENVTXXXX 475
+ +LD SL AK K+K T + +R KDIA +EAQ+Y + I+ R T ENV
Sbjct: 292 SLESLDTSLFAKNP-KSKGTKRDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQA 350
Query: 474 XXXXXXRDESGXXXXXXXXXXXXXXXDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYN 295
+E +E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+YN
Sbjct: 351 RTGEEREEEE---EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYN 407
Query: 294 CEICGNYTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKQQKE 115
CEICGNYTY+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW K+K QK
Sbjct: 408 CEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKA 467
Query: 114 TERFVAENDEEFEDSQGNVVNRKTFEDLKRQGLL 13
+ER+ + +EE+EDS GNVVN+KT+EDLKRQGLL
Sbjct: 468 SERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>BC071563-1|AAH71563.1| 451|Homo sapiens C1orf55 protein protein.
Length = 451
Score = 70.5 bits (165), Expect = 7e-12
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = -3
Query: 786 LDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKG--QTALDKSLVAK 613
+DL AF+S EL LGL++LK LMALGLKCGGTL+ERA RLFS +G + +D +L AK
Sbjct: 385 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAK 444
Query: 612 --KGNK 601
KG K
Sbjct: 445 PLKGKK 450
>AL133288-2|CAI22306.1| 451|Homo sapiens chromosome 1 open reading
frame 55 protein.
Length = 451
Score = 70.5 bits (165), Expect = 7e-12
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = -3
Query: 786 LDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKG--QTALDKSLVAK 613
+DL AF+S EL LGL++LK LMALGLKCGGTL+ERA RLFS +G + +D +L AK
Sbjct: 385 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAK 444
Query: 612 --KGNK 601
KG K
Sbjct: 445 PLKGKK 450
>AL133288-1|CAI22305.1| 356|Homo sapiens chromosome 1 open reading
frame 55 protein.
Length = 356
Score = 70.5 bits (165), Expect = 7e-12
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = -3
Query: 786 LDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKG--QTALDKSLVAK 613
+DL AF+S EL LGL++LK LMALGLKCGGTL+ERA RLFS +G + +D +L AK
Sbjct: 290 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAK 349
Query: 612 --KGNK 601
KG K
Sbjct: 350 PLKGKK 355
>AK127780-1|BAC87130.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ45881 fis, clone OCBBF3020414. ).
Length = 439
Score = 70.5 bits (165), Expect = 7e-12
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = -3
Query: 786 LDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKG--QTALDKSLVAK 613
+DL AF+S EL LGL++LK LMALGLKCGGTL+ERA RLFS +G + +D +L AK
Sbjct: 373 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAK 432
Query: 612 --KGNK 601
KG K
Sbjct: 433 PLKGKK 438
>AK092701-1|BAC03952.1| 356|Homo sapiens protein ( Homo sapiens
cDNA FLJ35382 fis, clone SKMUS2007915, weakly similar to
Splicing factor 3a, subunit 3, 60kD. ).
Length = 356
Score = 70.5 bits (165), Expect = 7e-12
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = -3
Query: 786 LDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKG--QTALDKSLVAK 613
+DL AF+S EL LGL++LK LMALGLKCGGTL+ERA RLFS +G + +D +L AK
Sbjct: 290 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAK 349
Query: 612 --KGNK 601
KG K
Sbjct: 350 PLKGKK 355
>M95971-1|AAA59919.1| 638|Homo sapiens neuroendocrine convertase 2
protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 153 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 208
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 209 GTRCAGEVSAAANNNI 224
>J05252-1|AAA60032.1| 638|Homo sapiens endoprotease protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 153 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 208
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 209 GTRCAGEVSAAANNNI 224
>BC040546-1|AAH40546.1| 619|Homo sapiens PCSK2 protein protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 134 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 189
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 190 GTRCAGEVSAAANNNI 205
>BC005815-1|AAH05815.1| 638|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 153 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 208
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 209 GTRCAGEVSAAANNNI 224
>AL359511-3|CAC34957.2| 619|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 134 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 189
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 190 GTRCAGEVSAAANNNI 205
>AL359511-2|CAI20085.1| 638|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 153 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 208
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 209 GTRCAGEVSAAANNNI 224
>AL121779-2|CAB96732.2| 619|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 134 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 189
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 190 GTRCAGEVSAAANNNI 205
>AL121779-1|CAI19155.1| 638|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 153 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 208
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 209 GTRCAGEVSAAANNNI 224
>AL031675-2|CAA21069.2| 619|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 134 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 189
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 190 GTRCAGEVSAAANNNI 205
>AL031675-1|CAI22648.1| 638|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 153 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 208
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 209 GTRCAGEVSAAANNNI 224
>AL031664-3|CAB89428.2| 619|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 134 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 189
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 190 GTRCAGEVSAAANNNI 205
>AL031664-2|CAI21690.1| 638|Homo sapiens proprotein convertase
subtilisin/kexin type 2 protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 393 EVPYNPKNLPLGWDGKPIPYWLYKLH-GLNISYNCEICGNYTYKGPKAFQRHFAEWRHAH 217
E+ Y K + +G I Y LH L +YN E +++ P + R+ +W ++H
Sbjct: 153 ELGYTGKGVTIGIMDDGIDY----LHPDLASNYNAEASYDFSSNDPYPYPRYTDDWFNSH 208
Query: 216 GMRCLGIPNTAHFANV 169
G RC G + A N+
Sbjct: 209 GTRCAGEVSAAANNNI 224
>X16609-2|CAA34611.1| 1719|Homo sapiens alt. ankyrin (variant 2.2)
protein.
Length = 1719
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 165 QIEDALALWEKIKQQKETERFVAEN--DEEFEDSQGNVVNRKTFEDLKRQ 22
Q+++A + ++ Q E + E +E+F D QGN+V +K + RQ
Sbjct: 1623 QVQEAKNTFTQVVQGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQ 1672
>X16609-1|CAA34610.1| 1881|Homo sapiens protein ( Human mRNA for
ankyrin (variant 2.1). ).
Length = 1881
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 165 QIEDALALWEKIKQQKETERFVAEN--DEEFEDSQGNVVNRKTFEDLKRQ 22
Q+++A + ++ Q E + E +E+F D QGN+V +K + RQ
Sbjct: 1785 QVQEAKNTFTQVVQGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQ 1834
>U50133-1|AAB47805.1| 1856|Homo sapiens ankyrin protein.
Length = 1856
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 165 QIEDALALWEKIKQQKETERFVAEN--DEEFEDSQGNVVNRKTFEDLKRQ 22
Q+++A + ++ Q E + E +E+F D QGN+V +K + RQ
Sbjct: 1760 QVQEAKNTFTQVVQGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQ 1809
>M28880-1|AAA51732.1| 1880|Homo sapiens ankyrin protein.
Length = 1880
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 165 QIEDALALWEKIKQQKETERFVAEN--DEEFEDSQGNVVNRKTFEDLKRQ 22
Q+++A + ++ Q E + E +E+F D QGN+V +K + RQ
Sbjct: 1785 QVQEAKNTFTQVVQGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQ 1834
>AB209418-1|BAD92655.1| 1899|Homo sapiens ankyrin 1 isoform 4 variant
protein.
Length = 1899
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 165 QIEDALALWEKIKQQKETERFVAEN--DEEFEDSQGNVVNRKTFEDLKRQ 22
Q+++A + ++ Q E + E +E+F D QGN+V +K + RQ
Sbjct: 1828 QVQEAKNTFTQVVQGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQ 1877
>Y08402-1|CAA69678.1| 120|Homo sapiens IgM variable region protein.
Length = 120
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/96 (25%), Positives = 44/96 (45%)
Frame = -3
Query: 828 LXETGGALTNVGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTK 649
L E+GGAL G L LS +S + L ++ A GL+ G ++ +A +T
Sbjct: 4 LVESGGALVQPGGSLKLSCAASGFTFSDSTLHWVRQA-SGKGLEWVGRIKTKANNYATTY 62
Query: 648 GQTALDKSLVAKKGNKAKATTQQRQKDIAAIEAQVY 541
G + + +++ + +K T + + A + VY
Sbjct: 63 GASVKGRFTISR--DDSKNTAYLQMNSLTAEDTAVY 96
>BC035760-1|AAH35760.1| 595|Homo sapiens ZNF440 protein protein.
Length = 595
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 324 KLHGLNISYNCEICGNYTYKGPKAFQRH 241
++H Y C+ICG Y PK+FQRH
Sbjct: 450 RIHSGERRYKCKICGKGFY-CPKSFQRH 476
>AK095252-1|BAC04510.1| 595|Homo sapiens protein ( Homo sapiens
cDNA FLJ37933 fis, clone CTONG2005028, moderately
similar to ZINC FINGER PROTEIN ZFP-36. ).
Length = 595
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 324 KLHGLNISYNCEICGNYTYKGPKAFQRH 241
++H Y C+ICG Y PK+FQRH
Sbjct: 450 RIHSGERRYKCKICGKGFY-CPKSFQRH 476
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,048,184
Number of Sequences: 237096
Number of extensions: 2623673
Number of successful extensions: 10922
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 10524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10910
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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