Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16d04
(830 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 35 0.31
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 35 0.31
AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated prot... 35 0.31
AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated prot... 35 0.42
AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated prot... 35 0.42
BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein. 34 0.55
AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated prot... 34 0.55
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 28 1.5
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 28 1.5
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 28 1.5
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 28 1.5
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 28 1.5
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 28 1.5
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 32 2.2
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 32 2.2
BC030702-1|AAH30702.2| 610|Homo sapiens MCPH1 protein protein. 31 3.9
AY505992-1|AAS87829.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505990-1|AAS87827.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505987-1|AAS87824.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505986-1|AAS87823.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505984-1|AAS87821.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505983-1|AAS87820.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505982-1|AAS87819.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505981-1|AAS87818.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505980-1|AAS87817.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY505977-1|AAS87814.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307836-1|AAQ92732.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307834-1|AAQ92730.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307833-1|AAQ92729.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307832-1|AAQ92728.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307830-1|AAQ92726.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307829-1|AAQ92725.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307827-1|AAQ92723.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307826-1|AAQ92722.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307825-1|AAQ92721.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307823-1|AAQ92719.1| 384|Homo sapiens microcephalin protein. 31 3.9
AY307821-1|AAQ92717.1| 384|Homo sapiens microcephalin protein. 31 3.9
AK022909-1|BAB14304.1| 740|Homo sapiens protein ( Homo sapiens ... 31 3.9
BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated prot... 31 5.1
BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated prot... 31 5.1
BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated prot... 31 5.1
BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated prot... 31 5.1
BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated prot... 31 5.1
AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated prot... 31 5.1
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 31 6.8
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.31
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRSHR*GCCCTVSPRVL 698
C P +C S+P C +C+ S C SG S C S S Q CCT SP
Sbjct: 47 CTPVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP--- 94
Query: 699 C*NCSCFP 722
C C P
Sbjct: 95 CQQACCVP 102
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.31
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRSHR*GCCCTVSPRVL 698
C P +C S+P C +C+ S C SG S C S S Q CCT SP
Sbjct: 47 CTPVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP--- 94
Query: 699 C*NCSCFP 722
C C P
Sbjct: 95 CQQACCVP 102
>AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated protein
protein.
Length = 255
Score = 35.1 bits (77), Expect = 0.31
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRSHR*GCCCTVSPRVL 698
C P +C S+P C +C+ S C SG S C S S Q CCT SP
Sbjct: 47 CTPVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP--- 94
Query: 699 C*NCSCFP 722
C C P
Sbjct: 95 CQQACCVP 102
>AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated protein
KAP10.10 protein.
Length = 251
Score = 34.7 bits (76), Expect = 0.42
Identities = 23/68 (33%), Positives = 28/68 (41%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRSHR*GCCCTVSPRVL 698
C P +C S+P C +C+ S C SG S C P C+ CCT SP
Sbjct: 42 CTPVSCVSSPCCQTACEPSAC--QSGYTSSC---TTPCYQQSSCQPD----CCTSSP--- 89
Query: 699 C*NCSCFP 722
C C P
Sbjct: 90 CQQACCVP 97
>AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated protein
protein.
Length = 251
Score = 34.7 bits (76), Expect = 0.42
Identities = 23/68 (33%), Positives = 28/68 (41%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRSHR*GCCCTVSPRVL 698
C P +C S+P C +C+ S C SG S C P C+ CCT SP
Sbjct: 42 CTPVSCVSSPCCQTACEPSAC--QSGYTSSC---TTPCYQQSSCQPD----CCTSSP--- 89
Query: 699 C*NCSCFP 722
C C P
Sbjct: 90 CQQACCVP 97
>BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein.
Length = 194
Score = 34.3 bits (75), Expect = 0.55
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRSHR*GCCCTVSPRVL 698
C P +C S+P C +C+ S C SG S C S S Q CCT SP
Sbjct: 47 CTPVSCVSSPCCQAACEPSPC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP--- 94
Query: 699 C*NCSCFP 722
C C P
Sbjct: 95 CQQACCVP 102
>AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.55
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRSHR*GCCCTVSPRVL 698
C P +C S+P C +C+ S C SG S C S S Q CCT SP
Sbjct: 47 CTPVSCVSSPCCQAACEPSPC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP--- 94
Query: 699 C*NCSCFP 722
C C P
Sbjct: 95 CQQACCVP 102
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 528 TACSSTPWCSDSCQ*SGC 581
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 507 CAVRCRPTACSSTPW 551
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 528 TACSSTPWCSDSCQ*SGC 581
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 507 CAVRCRPTACSSTPW 551
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 528 TACSSTPWCSDSCQ*SGC 581
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 507 CAVRCRPTACSSTPW 551
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 528 TACSSTPWCSDSCQ*SGC 581
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 507 CAVRCRPTACSSTPW 551
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 528 TACSSTPWCSDSCQ*SGC 581
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 507 CAVRCRPTACSSTPW 551
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 528 TACSSTPWCSDSCQ*SGC 581
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 507 CAVRCRPTACSSTPW 551
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQR--CRSH--R*GCCCTVS 686
C P +C S+P C +C+ S C SG S C S S Q C S + CC V
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPC--QSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVC 114
Query: 687 PRVLC 701
+ +C
Sbjct: 115 CKTVC 119
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 519 CRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQR--CRSH--R*GCCCTVS 686
C P +C S+P C +C+ S C SG S C S S Q C S + CC V
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPC--QSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVC 114
Query: 687 PRVLC 701
+ +C
Sbjct: 115 CKTVC 119
>BC030702-1|AAH30702.2| 610|Homo sapiens MCPH1 protein protein.
Length = 610
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 282 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 335
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 336 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 388
>AY505992-1|AAS87829.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505990-1|AAS87827.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505987-1|AAS87824.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505986-1|AAS87823.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505984-1|AAS87821.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505983-1|AAS87820.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505982-1|AAS87819.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505981-1|AAS87818.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505980-1|AAS87817.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505977-1|AAS87814.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307836-1|AAQ92732.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307834-1|AAQ92730.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307833-1|AAQ92729.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307832-1|AAQ92728.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307830-1|AAQ92726.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307829-1|AAQ92725.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307827-1|AAQ92723.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307826-1|AAQ92722.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307825-1|AAQ92721.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307823-1|AAQ92719.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307821-1|AAQ92717.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AK022909-1|BAB14304.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ12847 fis, clone NT2RP2003347. ).
Length = 740
Score = 31.5 bits (68), Expect = 3.9
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 445 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 266
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 187 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 240
Query: 265 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 110
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 241 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 293
>BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 QC--AVRCRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRS--HR*GC 671
QC +V C+PT C + S SC S C S PC R P C + +R C
Sbjct: 129 QCCQSVCCQPTCCRPSCCISSSCCPSCC--ESSCCRPCCCLR-PVCGRVSCHTTCYRPTC 185
Query: 672 CCTVSPRVLC*NCSC 716
+ PR LC SC
Sbjct: 186 VISTCPRPLCCASSC 200
>BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 QC--AVRCRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRS--HR*GC 671
QC +V C+PT C + S SC S C S PC R P C + +R C
Sbjct: 129 QCCQSVCCQPTCCRPSCCISSSCCPSCC--ESSCCRPCCCLR-PVCGRVSCHTTCYRPTC 185
Query: 672 CCTVSPRVLC*NCSC 716
+ PR LC SC
Sbjct: 186 VISTCPRPLCCASSC 200
>BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 QC--AVRCRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRS--HR*GC 671
QC +V C+PT C + S SC S C S PC R P C + +R C
Sbjct: 129 QCCQSVCCQPTCCRPSCCISSSCCPSCC--ESSCCRPCCCLR-PVCGRVSCHTTCYRPTC 185
Query: 672 CCTVSPRVLC*NCSC 716
+ PR LC SC
Sbjct: 186 VISTCPRPLCCASSC 200
>BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 QC--AVRCRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRS--HR*GC 671
QC +V C+PT C + S SC S C S PC R P C + +R C
Sbjct: 129 QCCQSVCCQPTCCRPSCCISSSCCPSCC--ESSCCRPCCCLR-PVCGRVSCHTTCYRPTC 185
Query: 672 CCTVSPRVLC*NCSC 716
+ PR LC SC
Sbjct: 186 VISTCPRPLCCASSC 200
>BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 QC--AVRCRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRS--HR*GC 671
QC +V C+PT C + S SC S C S PC R P C + +R C
Sbjct: 129 QCCQSVCCQPTCCRPSCCISSSCCPSCC--ESSCCRPCCCLR-PVCGRVSCHTTCYRPTC 185
Query: 672 CCTVSPRVLC*NCSC 716
+ PR LC SC
Sbjct: 186 VISTCPRPLCCASSC 200
>AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated protein
4.12 protein.
Length = 201
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 QC--AVRCRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRS--HR*GC 671
QC +V C+PT C + S SC S C S PC R P C + +R C
Sbjct: 129 QCCQSVCCQPTCCRPSCCISSSCCPSCC--ESSCCRPCCCLR-PVCGRVSCHTTCYRPTC 185
Query: 672 CCTVSPRVLC*NCSC 716
+ PR LC SC
Sbjct: 186 VISTCPRPLCCASSC 200
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 QC--AVRCRPTACSSTPWCSDSCQ*SGC*LHSG*WSPCLGSRIPSSDGQRCRS--HR*GC 671
QC +V C+PT C + +C SC C S PC R P C + +R C
Sbjct: 114 QCCQSVCCQPTCCRPS-YCISSCCHPSC-CESSCCRPCCCVR-PVCGRVSCHTTCYRPTC 170
Query: 672 CCTVSPRVLC*NCSC 716
+ PR LC SC
Sbjct: 171 VISTCPRPLCCASSC 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,935,574
Number of Sequences: 237096
Number of extensions: 2408511
Number of successful extensions: 7105
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 6170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7016
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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